Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0850 Trochodendron aralioides HOM05D007154 ORTHO05D008945 6.6e-57 223.8 111 100.0
TAR371G0017 Trochodendron aralioides HOM05D007154 ORTHO05D008945 8.4e-44 180.3 100 88.0
TAR371G0737 Trochodendron aralioides HOM05D007154 ORTHO05D008945 6.0e-42 174.1 100 85.0
Nn3g18537 Nelumbo nucifera HOM05D007154 ORTHO05D008945 8.4e-36 153.7 101 73.3
Dinv01916 Davidia involucrata HOM05D007154 ORTHO05D008945 1.8e-33 146.0 110 65.5
ATR0124G040 Amborella trichopoda HOM05D007154 ORTHO05D008945 2.8e-31 138.7 102 66.7
PSO063G0981 Papaver somniferum HOM05D007154 ORTHO05D008945 3.7e-31 138.3 100 66.0
PSO782G0712 Papaver somniferum HOM05D007154 ORTHO05D008945 3.7e-31 138.3 100 66.0
Ciclev10016869m.g Citrus clementina HOM05D007154 ORTHO05D008945 1.8e-30 136.0 102 64.7
Atru.chr11.40 Acer truncatum HOM05D007154 ORTHO05D008945 5.3e-30 134.4 102 65.7
GSVIVG01034352001 Vitis vinifera HOM05D007154 ORTHO05D008945 5.3e-30 134.4 101 65.3
Aqoxy3G04335 Aquilegia oxysepala HOM05D007154 ORTHO05D008945 1.5e-29 132.9 77 77.9
EL10Ac2g04490 Beta vulgaris HOM05D007154 ORTHO05D008945 1.5e-29 132.9 100 61.0
Cfa018670 Carpinus fangiana HOM05D007154 ORTHO05D008945 1.5e-29 132.9 110 60.0
TWI53G1167 Tripterygium wilfordii HOM05D007154 ORTHO05D008945 2.0e-29 132.5 106 62.3
TAR622G0969 Trochodendron aralioides HOM05D007154 ORTHO05D008945 2.6e-29 132.1 100 70.0
Thecc.02G152200 Theobroma cacao HOM05D007154 ORTHO05D008945 5.8e-29 131.0 100 62.0
Potri.010G254600 Populus trichocarpa HOM05D007154 ORTHO05D008945 7.6e-29 130.6 100 62.0
Actinidia04367 Actinidia chinensis HOM05D007154 ORTHO05D008945 1.3e-28 129.8 107 62.6
CiPaw.16G000700 Carya illinoinensis HOM05D007154 ORTHO05D008945 1.3e-28 129.8 106 60.4
Manes.04G160900 Manihot esculenta HOM05D007154 ORTHO05D008945 1.3e-28 129.8 109 61.5
PGSC0003DMG400025308 Solanum tuberosum HOM05D007154 ORTHO05D008945 1.3e-28 129.8 101 61.4
AUR62023198 Chenopodium quinoa HOM05D007154 ORTHO05D008945 2.9e-28 128.6 102 61.8
Sabra10G0198000 Salix brachista HOM05D007154 ORTHO05D008945 2.9e-28 128.6 100 61.0
Ah.10g037940 Amaranthus hybridus HOM05D007154 ORTHO05D008945 4.9e-28 127.9 100 60.0
Duzib248G1404 Durio zibethinus HOM05D007154 ORTHO05D008945 6.4e-28 127.5 108 56.5
CSS0036440 Camellia sinensis var. sinensis HOM05D007154 ORTHO05D008945 8.4e-28 127.1 108 56.5
Solyc04g008770.3 Solanum lycopersicum HOM05D007154 ORTHO05D008945 8.4e-28 127.1 101 62.4
Sopen04g003950 Solanum pennellii HOM05D007154 ORTHO05D008945 8.4e-28 127.1 101 62.4
Aa31LG11G2830 Aethionema arabicum HOM05D007154 ORTHO05D008945 2.4e-27 125.6 103 57.3
DCAR_030346 Daucus carota HOM05D007154 ORTHO05D008945 2.4e-27 125.6 104 60.6
AUR62023245 Chenopodium quinoa HOM05D007154 ORTHO05D008945 3.2e-27 125.2 102 60.8
Peaxi162Scf00329g00212 Petunia axillaris HOM05D007154 ORTHO05D008945 4.2e-27 124.8 107 58.9
HPP92_026886 Vanilla planifolia HOM05D007154 ORTHO05D008945 4.2e-27 124.8 103 62.1
Gorai.012G136600 Gossypium raimondii HOM05D007154 ORTHO05D008945 9.3e-27 123.6 98 59.2
CDE04G0025 Ceratophyllum demersum HOM05D007154 ORTHO05D008945 1.2e-26 123.2 98 61.2
COL.COLO4_33150 Corchorus olitorius HOM05D007154 ORTHO05D008945 1.6e-26 122.9 103 59.2
MD13G1001100 Malus domestica HOM05D007154 ORTHO05D008945 1.6e-26 122.9 102 58.8
Eucgr.G02613 Eucalyptus grandis HOM05D007154 ORTHO05D008945 2.1e-26 122.5 107 55.1
CAN.G419.16 Capsicum annuum HOM05D007154 ORTHO05D008945 2.7e-26 122.1 107 57.9
Oeu019256.1 Olea europaea HOM05D007154 ORTHO05D008945 2.7e-26 122.1 105 56.2
ClCG01G007940 Citrullus lanatus HOM05D007154 ORTHO05D008945 3.5e-26 121.7 104 59.6
Prupe.1G351600 Prunus persica HOM05D007154 ORTHO05D008945 3.5e-26 121.7 101 57.4
QL01p000323 Quercus lobata HOM05D007154 ORTHO05D008945 3.5e-26 121.7 105 58.1
AL6G34660 Arabidopsis lyrata HOM05D007154 ORTHO05D008945 4.6e-26 121.3 88 64.8
MELO3C005082.2 Cucumis melo HOM05D007154 ORTHO05D008945 7.9e-26 120.6 77 68.8
AT5G23395 Arabidopsis thaliana HOM05D007154 ORTHO05D008945 1.3e-25 119.8 111 55.0
CANSAT78G1733 Cannabis sativa HOM05D007154 ORTHO05D008945 2.3e-25 119.0 112 56.2
Thhalv10005037m.g Eutrema salsugineum HOM05D007154 ORTHO05D008945 2.3e-25 119.0 81 65.4
RcHm_v2.0_Chr4g0447181 Rosa chinensis HOM05D007154 ORTHO05D008945 3.9e-25 118.2 104 54.8
VMungo0331G0746 Vigna mungo HOM05D007154 ORTHO05D008945 3.9e-25 118.2 100 54.0
Gohir.D04G150000 Gossypium hirsutum HOM05D007154 ORTHO05D008945 6.7e-25 117.5 100 57.0
Sc10g0006590 Simmondsia chinensis HOM05D007154 ORTHO05D008945 6.7e-25 117.5 98 56.1
Cc00_g03880 Coffea canephora HOM05D007154 ORTHO05D008945 8.7e-25 117.1 106 55.7
CsaV3_5G021910 Cucumis sativus L. HOM05D007154 ORTHO05D008945 8.7e-25 117.1 77 67.5
SalBow4G2238 Salvia bowleyana HOM05D007154 ORTHO05D008945 8.7e-25 117.1 103 56.3
Lalb_Chr01g0013651 Lupinus albus HOM05D007154 ORTHO05D008945 1.1e-24 116.7 105 52.4
BcaNung03727 Brassica carinata HOM05D007154 ORTHO05D008945 1.9e-24 115.9 78 69.2
C07p44160 Brassica napus HOM05D007154 ORTHO05D008945 1.9e-24 115.9 78 69.2
BolC7t44940H Brassica oleracea HOM05D007154 ORTHO05D008945 1.9e-24 115.9 78 69.2
Carub.0006s2118 Capsella rubella HOM05D007154 ORTHO05D008945 2.5e-24 115.5 115 50.4
ECA240G2562 Erigeron canadensis HOM05D007154 ORTHO05D008945 5.6e-24 114.4 103 54.4
TPR.G36620 Trifolium pratense HOM05D007154 ORTHO05D008945 5.6e-24 114.4 100 52.0
Sed0008143 Sechium edule HOM05D007154 ORTHO05D008945 7.4e-24 114.0 104 56.7
FAN17G3039 Fragaria x ananassa HOM05D007154 ORTHO05D008945 9.6e-24 113.6 100 56.0
THA.LOC104800635 Tarenaya hassleriana HOM05D007154 ORTHO05D008945 1.3e-23 113.2 103 55.3
A06p34370 Brassica napus HOM05D007154 ORTHO05D008945 2.1e-23 112.5 109 56.0
BraA06t26367Z Brassica rapa HOM05D007154 ORTHO05D008945 2.1e-23 112.5 109 56.0
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 2.1e-23 112.5 129 48.8
Ca_23384_v3 Cicer arietinum L. HOM05D007154 ORTHO05D008945 2.8e-23 112.1 77 62.3
Phvul.010G129500 Phaseolus vulgaris HOM05D007154 ORTHO05D008945 3.7e-23 111.7 101 51.5
Sp2g23770 Schrenkiella parvula HOM05D007154 ORTHO05D008945 4.8e-23 111.3 72 70.8
Migut.B01210 Erythranthe guttata HOM05D007154 ORTHO05D008945 6.2e-23 110.9 106 50.9
Lj3g0022846 Lotus japonicus HOM05D007154 ORTHO05D008945 6.2e-23 110.9 100 50.0
Glyma.07G039300 Glycine max HOM05D007154 ORTHO05D008945 8.2e-23 110.5 100 51.0
Gohir.A04G109800 Gossypium hirsutum HOM05D007154 ORTHO05D008945 8.2e-23 110.5 98 54.1
FAN07G0022 Fragaria x ananassa HOM05D007154 ORTHO05D008945 1.4e-22 109.8 100 54.0
Medtr8g020800 Medicago truncatula HOM05D007154 ORTHO05D008945 1.4e-22 109.8 74 63.5
Lsat_1_v5_gn_9_117140 Lactuca sativa HOM05D007154 ORTHO05D008945 1.8e-22 109.4 74 66.2
PGR142G2984 Punica granatum HOM05D007154 ORTHO05D008945 1.8e-22 109.4 78 64.1
Os04g0527700 Oryza sativa ssp. japonica HOM05D007154 ORTHO05D008945 3.1e-22 108.6 88 59.1
HPP92_003488 Vanilla planifolia HOM05D007154 ORTHO05D008945 4.0e-22 108.2 112 52.7
arahy.Tifrunner.gnm1.ann1.408I3G Arachis hypogaea HOM05D007154 ORTHO05D008945 5.3e-22 107.8 75 61.3
arahy.Tifrunner.gnm1.ann1.JHQS48 Arachis hypogaea HOM05D007154 ORTHO05D008945 5.3e-22 107.8 75 61.3
Psat4g220160 Pisum sativum HOM05D007154 ORTHO05D008945 6.9e-22 107.5 77 59.7
Nitab4.5_0011708g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 9.0e-22 107.1 69 68.1
HanXRQChr13g0420721 Helianthus annuus HOM05D007154 ORTHO05D008945 1.2e-21 106.7 71 67.6
Lj3C844G3 Lonicera japonica HOM05D007154 ORTHO05D008945 1.5e-21 106.3 68 67.6
Nitab4.5_0007445g0030 Nicotiana tabacum HOM05D007154 ORTHO05D008945 2.6e-21 105.5 69 66.7
Nitab4.5_0002707g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 3.4e-21 105.1 69 66.7
Hund16199 Selenicereus undatus HOM05D007154 ORTHO05D008945 4.5e-21 104.8 101 47.5
SGA_v2.0_scaffold166G38315 Striga asiatica HOM05D007154 ORTHO05D008945 1.3e-20 103.2 100 51.0
vmacro16164 Vaccinium macrocarpon HOM05D007154 ORTHO05D008945 1.9e-19 99.4 85 56.5
Duzib051G0001 Durio zibethinus HOM05D007154 ORTHO05D008945 4.2e-19 98.2 87 56.3
Zm00001eb427080 Zea mays HOM05D007154 ORTHO05D008945 7.1e-19 97.4 75 60.0
CARHR190110 Cardamine hirsuta HOM05D007154 ORTHO05D008945 3.5e-18 95.1 56 69.6
unitig_61.g26453 Utricularia gibba HOM05D007154 ORTHO05D008945 3.5e-18 95.1 98 50.0
SGA_v2.0_scaffold249G44952 Striga asiatica HOM05D007154 ORTHO05D008945 6.0e-18 94.4 84 53.6
FvH4_4g37330 Fragaria vesca HOM05D007154 ORTHO05D008945 1.8e-17 92.8 55 69.1
Cpa.g.sc221.16 Carica papaya HOM05D007154 ORTHO05D008945 3.9e-17 91.7 56 66.1
Haze_17398 Corylus avellana HOM05D007154 ORTHO05D008945 5.7e-16 87.8 106 47.2
Zm00001eb076710 Zea mays HOM05D007154 ORTHO05D008945 7.4e-16 87.4 60 61.7
Glyma.16G008100 Glycine max HOM05D007154 ORTHO05D008945 3.7e-15 85.1 49 71.4
SHI21164 Sapria himalayana HOM05D007154 ORTHO05D008945 1.1e-14 83.6 70 54.3
Pp3c11_17450 Physcomitrium patens HOM05D007154 ORTHO05D008945 4.5e-13 78.2 81 48.1
SEGI_35140 Sequoiadendron giganteum HOM05D007154 ORTHO05D008945 6.5e-12 74.3 64 57.8
Mapoly0093s0036 Marchantia polymorpha HOM05D007154 ORTHO05D008945 2.5e-08 62.4 58 46.6
AagrBONN_evm.TU.Sc2ySwM_362.2201 Anthoceros agrestis HOM05D007154 ORTHO05D008945 7.4e-08 60.8 53 43.4
MCO07G261 Micromonas commoda HOM05D007154 ORTHO05D008945 1.3e-07 60.1 76 42.1


User provided reference genes

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