Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0722 Trochodendron aralioides HOM05D006030 ORTHO05D007475 3.3e-170 601.7 317 100.0
TAR624G0353 Trochodendron aralioides HOM05D006030 ORTHO05D007475 1.7e-113 413.3 317 70.3
Dinv21492 Davidia involucrata HOM05D006030 ORTHO05D007475 3.9e-102 375.6 319 65.5
Hma1.2p1_0689F.1_g203740 Hydrangea macrophylla HOM05D006030 ORTHO05D007475 6.6e-102 374.8 322 64.3
Ciclev10015995m.g Citrus clementina HOM05D006030 ORTHO05D007475 8.6e-102 374.4 317 64.4
MD10G1256000 Malus domestica HOM05D006030 ORTHO05D007475 9.6e-101 370.9 310 64.8
MBI18_g10587_MAGBIO Magnolia biondii HOM05D006030 ORTHO05D007475 6.2e-100 368.2 324 65.4
Atru.chr10.1031 Acer truncatum HOM05D006030 ORTHO05D007475 1.8e-99 366.7 326 66.0
Prupe.4G087600 Prunus persica HOM05D006030 ORTHO05D007475 9.9e-98 360.9 312 63.5
CSS0019216 Camellia sinensis var. sinensis HOM05D006030 ORTHO05D007475 6.4e-97 358.2 319 62.4
QL05p054330 Quercus lobata HOM05D006030 ORTHO05D007475 1.9e-96 356.7 319 62.4
CSS0008742 Camellia sinensis var. sinensis HOM05D006030 ORTHO05D007475 1.7e-94 350.1 320 61.6
Cfa000873 Carpinus fangiana HOM05D006030 ORTHO05D007475 2.3e-94 349.7 306 65.4
Rhsim02G0159700 Rhododendron simsii HOM05D006030 ORTHO05D007475 5.6e-93 345.1 323 63.2
Peaxi162Scf00045g00235 Petunia axillaris HOM05D000253 ORTHO05D000149 1.6e-92 343.6 319 59.6
Haze_05717 Corylus avellana HOM05D006030 ORTHO05D007475 2.1e-92 343.2 306 63.7
FvH4_3g09520 Fragaria vesca HOM05D006030 ORTHO05D007475 6.2e-92 341.7 314 63.1
FAN11G1717 Fragaria x ananassa HOM05D006030 ORTHO05D007475 8.1e-92 341.3 314 63.1
CiPaw.09G117700 Carya illinoinensis HOM05D006030 ORTHO05D007475 1.1e-91 340.9 318 61.0
TWI09G0666 Tripterygium wilfordii HOM05D006030 ORTHO05D007475 4.0e-91 339.0 295 62.7
Nitab4.5_0000315g0160 Nicotiana tabacum HOM05D006030 ORTHO05D007475 6.9e-91 338.2 324 58.6
Potri.011G091700 Populus trichocarpa HOM05D006030 ORTHO05D007475 9.0e-91 337.8 315 62.5
FAN16G0477 Fragaria x ananassa HOM05D006030 ORTHO05D007475 1.2e-90 337.4 314 62.4
MD05G1060100 Malus domestica HOM05D006030 ORTHO05D007475 4.5e-90 335.5 310 61.3
Nitab4.5_0008802g0020 Nicotiana tabacum HOM05D006030 ORTHO05D007475 5.8e-90 335.1 322 58.1
CSS0023088 Camellia sinensis var. sinensis HOM05D006030 ORTHO05D007475 7.6e-90 334.7 318 59.1
FAN25G1233 Fragaria x ananassa HOM05D006030 ORTHO05D007475 7.6e-90 334.7 309 62.1
FAN21G0577 Fragaria x ananassa HOM05D006030 ORTHO05D007475 1.3e-89 334.0 314 62.1
Aqoxy1G01654 Aquilegia oxysepala HOM05D006030 ORTHO05D007475 1.9e-88 330.1 297 62.3
RcHm_v2.0_Chr5g0015101 Rosa chinensis HOM05D006030 ORTHO05D007475 5.4e-88 328.6 314 61.5
Manes.15G125900 Manihot esculenta HOM05D006030 ORTHO05D007475 9.3e-88 327.8 314 61.1
Thecc.02G010100 Theobroma cacao HOM05D006030 ORTHO05D007475 2.1e-87 326.6 300 63.0
Sabra11G0085900 Salix brachista HOM05D006030 ORTHO05D007475 5.6e-85 318.5 311 60.8
Nn4g26650 Nelumbo nucifera HOM05D006030 ORTHO05D007475 8.1e-84 314.7 290 61.4
TWI53G0643 Tripterygium wilfordii HOM05D006030 ORTHO05D007475 1.4e-83 313.9 293 59.4
PGSC0003DMG400005380 Solanum tuberosum HOM05D006030 ORTHO05D007475 2.6e-82 309.7 320 55.3
PSO541G2924 Papaver somniferum HOM05D006030 ORTHO05D007475 4.5e-82 308.9 312 61.2
MSTRG.14783 Avicennia marina HOM05D006030 ORTHO05D007475 5.8e-82 308.5 330 56.7
ClCG03G006430 Citrullus lanatus HOM05D006030 ORTHO05D007475 9.9e-82 307.8 311 58.8
MELO3C002779.2 Cucumis melo HOM05D006030 ORTHO05D007475 8.4e-81 304.7 316 56.6
Solyc08g023270.3 Solanum lycopersicum HOM05D006030 ORTHO05D007475 8.4e-81 304.7 320 54.7
Sopen08g008180 Solanum pennellii HOM05D006030 ORTHO05D007475 8.4e-81 304.7 320 54.7
CAN.G36.30 Capsicum annuum HOM05D006030 ORTHO05D007475 1.4e-80 303.9 320 53.8
Nn3g20281 Nelumbo nucifera HOM05D006030 ORTHO05D007475 1.9e-80 303.5 264 64.0
CsaV3_1G036960 Cucumis sativus L. HOM05D006030 ORTHO05D007475 5.5e-80 302.0 296 58.1
Actinidia39595 Actinidia chinensis HOM05D006030 ORTHO05D007475 2.7e-79 299.7 322 57.5
Lj2A324T65 Lonicera japonica HOM05D006030 ORTHO05D007475 4.6e-79 298.9 322 54.0
Lj1A1167T61 Lonicera japonica HOM05D006030 ORTHO05D007475 5.1e-78 295.4 312 57.4
Duzib132G1046 Durio zibethinus HOM05D006030 ORTHO05D007475 1.1e-77 294.3 298 58.4
PSO541G2932 Papaver somniferum HOM05D006030 ORTHO05D007475 1.1e-77 294.3 318 56.9
PSO675G1541 Papaver somniferum HOM05D006030 ORTHO05D007475 2.5e-77 293.1 314 58.9
Peaxi162Scf00333g00215 Petunia axillaris HOM05D006030 ORTHO05D007475 9.6e-77 291.2 300 55.0
TPR.G26249 Trifolium pratense HOM05D006030 ORTHO05D007475 2.8e-76 289.7 298 56.4
Nitab4.5_0000717g0050 Nicotiana tabacum HOM05D006030 ORTHO05D007475 1.1e-75 287.7 322 51.2
Psat1g191320 Pisum sativum HOM05D006030 ORTHO05D007475 1.4e-75 287.3 298 55.7
Nitab4.5_0002900g0020 Nicotiana tabacum HOM05D006030 ORTHO05D007475 1.8e-75 287.0 322 50.6
Lalb_Chr20g0117731 Lupinus albus HOM05D006030 ORTHO05D007475 9.0e-75 284.6 295 55.9
PSO675G3639 Papaver somniferum HOM05D006030 ORTHO05D007475 2.6e-74 283.1 319 55.5
Medtr2g018890 Medicago truncatula HOM05D006030 ORTHO05D007475 7.6e-74 281.6 298 54.7
Ca_00520_v3 Cicer arietinum L. HOM05D006030 ORTHO05D007475 1.7e-73 280.4 292 55.1
Cc09_g08600 Coffea canephora HOM05D006030 ORTHO05D007475 1.7e-73 280.4 337 52.8
Lj6g0008094 Lotus japonicus HOM05D006030 ORTHO05D007475 2.9e-73 279.6 301 55.1
MBI02_g11375_MAGBIO Magnolia biondii HOM05D006030 ORTHO05D007475 2.9e-73 279.6 297 57.6
Glyma.15G092100 Glycine max HOM05D006030 ORTHO05D007475 4.9e-73 278.9 300 55.3
Manes.17G075000 Manihot esculenta HOM05D006030 ORTHO05D007475 4.9e-73 278.9 309 54.4
Sed0012497 Sechium edule HOM05D006030 ORTHO05D007475 1.4e-72 277.3 293 56.3
Sed0007526 Sechium edule HOM05D006030 ORTHO05D007475 1.2e-71 274.2 283 55.5
COL.COLO4_17663 Corchorus olitorius HOM05D006030 ORTHO05D007475 6.0e-71 271.9 306 54.2
Aa31LG9G8890 Aethionema arabicum HOM05D006030 ORTHO05D007475 1.3e-70 270.8 312 54.8
CANSAT35G1388 Cannabis sativa HOM05D006030 ORTHO05D007475 1.8e-70 270.4 336 50.9
Lalb_Chr15g0086701 Lupinus albus HOM05D006030 ORTHO05D007475 1.8e-70 270.4 295 53.9
Lalb_Chr18g0055221 Lupinus albus HOM05D006030 ORTHO05D007475 2.3e-70 270.0 295 54.6
ECA236G5152 Erigeron canadensis HOM05D006030 ORTHO05D007475 3.0e-70 269.6 304 54.3
Thhalv10029201m.g Eutrema salsugineum HOM05D006030 ORTHO05D007475 5.1e-70 268.9 310 52.9
Sp6g03610 Schrenkiella parvula HOM05D006030 ORTHO05D007475 6.7e-70 268.5 309 52.1
Duzib052G0461 Durio zibethinus HOM05D006030 ORTHO05D007475 8.7e-70 268.1 284 56.7
SalBow7G1462 Salvia bowleyana HOM05D006030 ORTHO05D007475 8.7e-70 268.1 337 49.6
SalBow7G3121 Salvia bowleyana HOM05D006030 ORTHO05D007475 8.7e-70 268.1 337 49.6
EL10Ac8g19610 Beta vulgaris HOM05D006030 ORTHO05D007475 1.1e-69 267.7 308 52.3
Eucgr.E02463 Eucalyptus grandis HOM05D006030 ORTHO05D007475 1.5e-69 267.3 252 58.3
Glyma.13G220300 Glycine max HOM05D006030 ORTHO05D007475 1.5e-69 267.3 302 55.6
AUR62030127 Chenopodium quinoa HOM05D006030 ORTHO05D007475 5.7e-69 265.4 310 51.9
PGR031G1516 Punica granatum HOM05D006030 ORTHO05D007475 3.7e-68 262.7 313 54.3
AUR62002659 Chenopodium quinoa HOM05D006030 ORTHO05D007475 8.2e-68 261.5 305 52.1
AL6G49160 Arabidopsis lyrata HOM05D006030 ORTHO05D007475 1.4e-67 260.8 312 51.6
Carub.0006s3344 Capsella rubella HOM05D006030 ORTHO05D007475 1.8e-67 260.4 313 52.4
Phvul.006G167100 Phaseolus vulgaris HOM05D006030 ORTHO05D007475 3.1e-67 259.6 296 51.0
Migut.H01344 Erythranthe guttata HOM05D006030 ORTHO05D007475 4.1e-67 259.2 340 50.6
CARHR252040 Cardamine hirsuta HOM05D006030 ORTHO05D007475 1.5e-66 257.3 308 51.6
VMungo0540G2189 Vigna mungo HOM05D006030 ORTHO05D007475 3.4e-66 256.1 294 51.4
AT4G03620 Arabidopsis thaliana HOM05D006030 ORTHO05D007475 4.5e-66 255.8 314 51.0
HanXRQChr04g0112111 Helianthus annuus HOM05D006030 ORTHO05D007475 4.5e-66 255.8 305 50.8
Sc05g0005830 Simmondsia chinensis HOM05D006030 ORTHO05D007475 1.0e-65 254.6 298 52.3
BcaB01g01909 Brassica carinata HOM05D006030 ORTHO05D007475 1.7e-65 253.8 307 51.5
DCAR_007858 Daucus carota HOM05D006030 ORTHO05D007475 8.5e-65 251.5 281 53.7
THA.LOC104806979 Tarenaya hassleriana HOM05D006030 ORTHO05D007475 1.1e-64 251.1 307 51.8
HanXRQChr15g0481561 Helianthus annuus HOM05D006030 ORTHO05D007475 3.6e-63 246.1 304 51.0
A09p02880 Brassica napus HOM05D006030 ORTHO05D007475 6.1e-63 245.4 313 51.4
MSTRG.13261 Avicennia marina HOM05D006030 ORTHO05D007475 2.3e-62 243.4 332 50.3
BraA09t35933Z Brassica rapa HOM05D006030 ORTHO05D007475 5.1e-62 242.3 313 51.4
GSVIVG01021577001 Vitis vinifera HOM05D006030 ORTHO05D007475 8.7e-62 241.5 198 70.7
C09p02960 Brassica napus HOM05D006030 ORTHO05D007475 1.5e-61 240.7 311 50.5
DCAR_027876 Daucus carota HOM05D006030 ORTHO05D007475 1.9e-61 240.4 300 49.7
BcaC04g23958 Brassica carinata HOM05D006030 ORTHO05D007475 1.6e-60 237.3 311 50.2
BolC9t53223H Brassica oleracea HOM05D006030 ORTHO05D007475 1.6e-60 237.3 311 50.2
Hund21555 Selenicereus undatus HOM05D006030 ORTHO05D007475 2.8e-60 236.5 306 51.3
Lsat_1_v5_gn_1_116040 Lactuca sativa HOM05D006030 ORTHO05D007475 4.1e-59 232.6 278 49.3
arahy.Tifrunner.gnm1.ann1.IB7BS1 Arachis hypogaea HOM05D006030 ORTHO05D007475 2.0e-58 230.3 301 48.2
arahy.Tifrunner.gnm1.ann1.Z0KP5S Arachis hypogaea HOM05D006030 ORTHO05D007475 2.6e-58 229.9 301 48.2
Ah.09g232450 Amaranthus hybridus HOM05D006030 ORTHO05D007475 7.7e-58 228.4 275 51.3
SalBow8G3821 Salvia bowleyana HOM05D006030 ORTHO05D007475 2.9e-57 226.5 299 46.5
Lsat_1_v5_gn_7_32280 Lactuca sativa HOM05D006030 ORTHO05D007475 5.5e-56 222.2 295 48.8
SGA_v2.0_scaffold51G18644 Striga asiatica HOM05D006030 ORTHO05D007475 2.1e-55 220.3 291 47.8
DCAR_003876 Daucus carota HOM05D006030 ORTHO05D007475 6.7e-54 215.3 256 54.7
Sopen02g005930 Solanum pennellii HOM05D006030 ORTHO05D007475 1.1e-53 214.5 297 46.8
Solyc02g021450.2 Solanum lycopersicum HOM05D006030 ORTHO05D007475 1.5e-53 214.2 297 46.5
PGSC0003DMG400031336 Solanum tuberosum HOM05D006030 ORTHO05D007475 1.5e-53 214.2 297 46.8
arahy.Tifrunner.gnm1.ann1.TN2AI9 Arachis hypogaea HOM05D006030 ORTHO05D007475 1.1e-48 198.0 278 46.4
arahy.Tifrunner.gnm1.ann1.DKT922 Arachis hypogaea HOM05D006030 ORTHO05D007475 1.4e-48 197.6 292 45.2
ATR0626G038 Amborella trichopoda HOM05D006030 ORTHO05D007475 9.1e-43 178.3 255 44.7
Cpa.g.sc17.66 Carica papaya HOM05D006030 ORTHO05D007475 1.1e-40 171.4 163 59.5
HPP92_019506 Vanilla planifolia HOM05D006030 ORTHO05D007475 2.0e-37 160.6 279 39.1
Migut.M01870 Erythranthe guttata HOM05D006030 ORTHO05D007475 9.8e-29 131.7 131 60.3
unitig_37.g12083 Utricularia gibba HOM05D006030 ORTHO05D007475 3.7e-28 129.8 171 49.1
Peaxi162Scf00333g00214 Petunia axillaris HOM05D006030 ORTHO05D007475 8.0e-23 112.1 120 56.7
SEGI_26103 Sequoiadendron giganteum HOM05D006030 ORTHO05D007475 4.1e-19 99.8 273 33.7
Nn1g09396 Nelumbo nucifera HOM05D006030 ORTHO05D007475 1.6e-18 97.8 162 42.0
Duzib248G1648 Durio zibethinus HOM05D006030 ORTHO05D007475 2.7e-18 97.1 121 47.1
SGA_v2.0_scaffold106G30660 Striga asiatica HOM05D006030 ORTHO05D007475 3.3e-08 63.5 119 39.5


User provided reference genes

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