Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0640 Trochodendron aralioides HOM05D006785 ORTHO05D006259 3.4e-216 755.0 458 100.0
TAR622G1344 Trochodendron aralioides HOM05D006785 ORTHO05D006259 1.7e-53 214.5 154 80.5
Nn3g20927 Nelumbo nucifera HOM05D006785 ORTHO05D006259 3.3e-46 190.3 273 50.2
TAR629G3165 Trochodendron aralioides HOM05D006785 ORTHO05D006259 6.5e-42 176.0 143 71.3
Dinv07090 Davidia involucrata HOM05D006785 ORTHO05D006259 1.2e-30 138.7 322 41.0
TAR627G0303 Trochodendron aralioides HOM05D006785 ORTHO05D006259 5.9e-27 126.3 105 70.5
Actinidia32516 Actinidia chinensis HOM05D006785 ORTHO05D006259 2.3e-26 124.4 274 37.2
MBI10_g42732_MAGBIO Magnolia biondii HOM05D006785 ORTHO05D006259 5.0e-26 123.2 147 55.1
CSS0028256 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 1.7e-21 108.2 271 35.1
CSS0047125 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 1.7e-21 108.2 271 35.1
Actinidia11204 Actinidia chinensis HOM05D006785 ORTHO05D006259 2.2e-21 107.8 180 42.2
PSO541G2000 Papaver somniferum HOM05D006785 ORTHO05D006259 2.2e-21 107.8 186 40.9
MBI07_g07832_MAGBIO Magnolia biondii HOM05D006785 ORTHO05D006259 5.4e-20 103.2 257 33.5
PSO675G6378 Papaver somniferum HOM05D006785 ORTHO05D006259 1.2e-19 102.1 180 40.6
Sed0020726 Sechium edule HOM05D006785 ORTHO05D006259 3.5e-19 100.5 248 37.1
DCAR_013314 Daucus carota HOM05D006785 ORTHO05D006259 4.5e-19 100.1 178 41.6
PGR042G2728 Punica granatum HOM05D006785 ORTHO05D006259 7.8e-19 99.4 152 42.1
Eucgr.A01969 Eucalyptus grandis HOM05D006785 ORTHO05D006259 2.3e-18 97.8 166 41.0
Manes.01G127500 Manihot esculenta HOM05D006785 ORTHO05D006259 2.3e-18 97.8 170 41.8
Carub.0001s0590 Capsella rubella HOM05D006785 ORTHO05D006259 1.1e-17 95.5 262 32.4
ATR0568G074 Amborella trichopoda HOM05D006785 ORTHO05D006259 5.6e-17 93.2 191 39.3
Rhsim06G0116700 Rhododendron simsii HOM05D006785 ORTHO05D006259 9.5e-17 92.4 179 40.8
HanXRQChr08g0227971 Helianthus annuus HOM05D009485 ORTHO05D006259 2.8e-16 90.9 175 37.1
vmacro12460 Vaccinium macrocarpon HOM05D006785 ORTHO05D006259 6.1e-16 89.7 259 31.3
Hma1.2p1_0960F.1_g241635 Hydrangea macrophylla HOM05D006785 ORTHO05D006259 1.0e-15 89.0 246 32.1
PSO104G0025 Papaver somniferum HOM05D006785 ORTHO05D006259 1.4e-15 88.6 126 42.9
TWI59G0461 Tripterygium wilfordii HOM05D006785 ORTHO05D006259 1.4e-15 88.6 261 37.2
Duzib264G0099 Durio zibethinus HOM05D006785 ORTHO05D006259 3.0e-15 87.4 167 43.1
Manes.02G084200 Manihot esculenta HOM05D006785 ORTHO05D006259 3.0e-15 87.4 259 30.5
CiPaw.03G189000 Carya illinoinensis HOM05D006785 ORTHO05D006259 6.8e-15 86.3 179 43.0
Thecc.01G161700 Theobroma cacao HOM05D006785 ORTHO05D006259 2.6e-14 84.3 148 43.2
AT1G06530 Arabidopsis thaliana HOM05D006785 ORTHO05D006259 3.4e-14 84.0 261 30.3
ECA233G1175 Erigeron canadensis HOM05D009485 ORTHO05D006259 5.8e-14 83.2 180 37.2
Cfa021376 Carpinus fangiana HOM05D006785 ORTHO05D006259 1.3e-13 82.0 258 38.0
Sopen10g003690 Solanum pennellii HOM05D009485 ORTHO05D006259 1.3e-13 82.0 258 33.7
Aqoxy4G00148 Aquilegia oxysepala HOM05D006785 ORTHO05D006259 1.7e-13 81.6 137 43.8
ClCG02G018390 Citrullus lanatus HOM05D006785 ORTHO05D006259 4.9e-13 80.1 249 34.9
QL08p044083 Quercus lobata HOM05D006785 ORTHO05D006259 4.9e-13 80.1 264 40.2
THA.LOC104800823 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 8.3e-13 79.3 221 30.8
Gorai.008G098200 Gossypium raimondii HOM05D006785 ORTHO05D006259 3.2e-12 77.4 257 36.6
FAN05G2931 Fragaria x ananassa HOM05D006785 ORTHO05D006259 5.4e-12 76.6 104 46.2
Lj1P620T12 Lonicera japonica HOM05D006785 ORTHO05D006259 9.2e-12 75.9 174 32.2
CsaV3_6G015830 Cucumis sativus L. HOM05D006785 ORTHO05D006259 1.6e-11 75.1 258 31.0
FAN09G1973 Fragaria x ananassa HOM05D006785 ORTHO05D006259 2.7e-11 74.3 101 45.5
Atru.chr6.2094 Acer truncatum HOM05D006785 ORTHO05D006259 3.5e-11 73.9 149 36.2
Aa31LG1G7630 Aethionema arabicum HOM05D006785 ORTHO05D006259 3.5e-11 73.9 144 34.7
AL1G16560 Arabidopsis lyrata HOM05D006785 ORTHO05D006259 3.5e-11 73.9 171 34.5
Migut.M00503 Erythranthe guttata HOM05D009485 ORTHO05D006259 3.5e-11 73.9 263 28.5
Cpa.g.sc50.80 Carica papaya HOM05D006785 ORTHO05D006259 6.0e-11 73.2 143 40.6
MSTRG.6747 Avicennia marina HOM05D009485 ORTHO05D006259 1.3e-10 72.0 164 36.0
Gohir.D04G036800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 1.7e-10 71.6 188 37.2
Gohir.A05G378800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 2.3e-10 71.2 188 37.2
Gohir.A12G079000 Gossypium hirsutum HOM05D006785 ORTHO05D006259 2.3e-10 71.2 257 35.8
Gorai.012G041600 Gossypium raimondii HOM05D006785 ORTHO05D006259 3.0e-10 70.9 188 37.2
Gohir.D12G068400 Gossypium hirsutum HOM05D006785 ORTHO05D006259 3.9e-10 70.5 257 30.4
Peaxi162Scf00111g00008 Petunia axillaris HOM05D009485 ORTHO05D006259 6.6e-10 69.7 163 31.9
Haze_13495 Corylus avellana HOM05D006785 ORTHO05D006259 1.1e-09 68.9 258 35.7
VMungo0647G1995 Vigna mungo HOM05D006785 ORTHO05D006259 2.5e-09 67.8 96 42.7
CARHR006150 Cardamine hirsuta HOM05D006785 ORTHO05D006259 4.3e-09 67.0 222 30.2
Oeu036701.1 Olea europaea HOM05D006851 ORTHO05D008844 4.3e-09 67.0 241 28.6
BraA10t42785Z Brassica rapa HOM05D006785 ORTHO05D006259 9.5e-09 65.9 132 35.6
Oeu020927.1 Olea europaea HOM05D009485 ORTHO05D006259 9.5e-09 65.9 176 31.2
CANSAT64G1891 Cannabis sativa HOM05D006785 ORTHO05D006259 1.2e-08 65.5 261 32.2
BcaB02g06783 Brassica carinata HOM05D006785 ORTHO05D006259 1.6e-08 65.1 132 35.6
MELO3C019688.2 Cucumis melo HOM05D006785 ORTHO05D006259 1.6e-08 65.1 118 40.7
Lsat_1_v5_gn_6_18081 Lactuca sativa HOM05D009485 ORTHO05D006259 2.1e-08 64.7 178 32.0
Nitab4.5_0001402g0020 Nicotiana tabacum HOM05D009485 ORTHO05D006259 2.1e-08 64.7 177 36.2
Nitab4.5_0002027g0170 Nicotiana tabacum HOM05D009485 ORTHO05D006259 2.8e-08 64.3 177 36.2
Sed0007746 Sechium edule HOM05D006785 ORTHO05D006259 6.2e-08 63.2 257 34.6
Aa31LG5G5980 Aethionema arabicum HOM05D006785 ORTHO05D006259 8.0e-08 62.8 216 36.1
Cc05_g09420 Coffea canephora HOM05D009485 ORTHO05D006259 8.0e-08 62.8 140 36.4
Thhalv10009835m.g Eutrema salsugineum HOM05D006785 ORTHO05D006259 1.1e-07 62.4 222 31.1
unitig_747.g21610 Utricularia gibba HOM05D009485 ORTHO05D006259 1.1e-07 62.4 256 27.3
Gohir.D11G228900 Gossypium hirsutum HOM05D006785 ORTHO05D006259 1.4e-07 62.0 101 40.6
CAN.G585.40 Capsicum annuum HOM05D009485 ORTHO05D006259 1.8e-07 61.6 172 34.3
Ciclev10032336m.g Citrus clementina HOM05D006785 ORTHO05D006259 4.0e-07 60.5 74 47.3
CAN.G1191.3 Capsicum annuum HOM05D009485 ORTHO05D006259 8.9e-07 59.3 177 35.0
Sp1g05290 Schrenkiella parvula HOM05D006785 ORTHO05D006259 1.2e-06 58.9 171 39.8
Potri.002G060200 Populus trichocarpa HOM05D006785 ORTHO05D006259 1.5e-06 58.5 145 37.2
Peaxi162Scf00035g00291 Petunia axillaris HOM05D009485 ORTHO05D006259 3.4e-06 57.4 258 30.2
PGSC0003DMG400021282 Solanum tuberosum HOM05D009485 ORTHO05D006259 3.4e-06 57.4 177 33.9
THA.LOC104802276 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 3.4e-06 57.4 261 33.0
TAR633G2179 Trochodendron aralioides HOM05D002789 ORTHO05D003185 4.4e-06 57.0 49 59.2
CDE04G1723 Ceratophyllum demersum HOM05D050733 ORTHO05D006259 5.8e-06 56.6 116 36.2
C05p04790 Brassica napus HOM05D006785 ORTHO05D006259 7.5e-06 56.2 103 33.0
Solyc10g007780.3 Solanum lycopersicum HOM05D009485 ORTHO05D006259 7.5e-06 56.2 104 40.4
FAN02G2853 Fragaria x ananassa HOM05D006785 ORTHO05D006259 9.8e-06 55.8 104 39.4
FAN14G2666 Fragaria x ananassa HOM05D006785 ORTHO05D006259 9.8e-06 55.8 104 39.4


User provided reference genes

Program Settings