Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0610 Trochodendron aralioides HOM05D008142 ORTHO05D009674 2.4e-59 231.9 111 100.0
Nn3g20734 Nelumbo nucifera HOM05D008142 ORTHO05D009674 8.4e-20 100.5 87 59.8
TAR629G2490 Trochodendron aralioides HOM05D008142 ORTHO05D009674 7.1e-19 97.4 83 60.2
TAR627G0365 Trochodendron aralioides HOM05D008142 ORTHO05D009674 1.5e-16 89.7 88 58.0
Nn4g26546 Nelumbo nucifera HOM05D008142 ORTHO05D009674 4.3e-16 88.2 78 52.6
MBI10_g02220_MAGBIO Magnolia biondii HOM05D008142 ORTHO05D009674 2.8e-15 85.5 88 48.9
MBI07_g26359_MAGBIO Magnolia biondii HOM05D008142 ORTHO05D009674 9.0e-14 80.5 80 52.5
QL04p069987 Quercus lobata HOM05D008142 ORTHO05D009674 1.2e-13 80.1 86 47.7
Eucgr.F03213 Eucalyptus grandis HOM05D008142 ORTHO05D009674 7.6e-13 77.4 69 59.4
QL04p069966 Quercus lobata HOM05D008142 ORTHO05D009674 1.9e-11 72.8 69 49.3
FvH4_3g16940 Fragaria vesca HOM05D008142 ORTHO05D009674 1.2e-10 70.1 87 46.0
FAN11G1471 Fragaria x ananassa HOM05D008142 ORTHO05D009674 1.2e-10 70.1 87 46.0
FAN16G2943 Fragaria x ananassa HOM05D008142 ORTHO05D009674 1.2e-10 70.1 87 46.0
Aqoxy1G01717 Aquilegia oxysepala HOM05D008142 ORTHO05D009674 1.6e-10 69.7 86 50.0
RhsimUnG0205200 Rhododendron simsii HOM05D008142 ORTHO05D009674 2.7e-10 68.9 91 42.9
Thecc.07G144200 Theobroma cacao HOM05D008142 ORTHO05D009674 2.7e-10 68.9 68 50.0
Thecc.07G144400 Theobroma cacao HOM05D008142 ORTHO05D009674 3.6e-10 68.6 67 50.7
CSS0003990 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 1.4e-09 66.6 84 47.6
FAN21G3515 Fragaria x ananassa HOM05D008142 ORTHO05D009674 1.4e-09 66.6 87 44.8
RhsimUnG0205300 Rhododendron simsii HOM05D008142 ORTHO05D009674 5.1e-09 64.7 75 46.7
Hma1.2p1_0280F.1_g112890 Hydrangea macrophylla HOM05D008142 ORTHO05D009674 1.5e-08 63.2 74 45.9
Aqoxy1G01721 Aquilegia oxysepala HOM05D008142 ORTHO05D009674 1.9e-08 62.8 95 41.1
RcHm_v2.0_Chr5g0028181 Rosa chinensis HOM05D008142 ORTHO05D009674 2.5e-08 62.4 72 47.2
Potri.001G379400 Populus trichocarpa HOM05D008142 ORTHO05D009674 5.7e-08 61.2 76 47.4
TAR626G0317 Trochodendron aralioides HOM05D008142 ORTHO05D009674 7.4e-08 60.8 86 40.7
Actinidia35170 Actinidia chinensis HOM05D008142 ORTHO05D009674 9.7e-08 60.5 75 46.7
MD03G1255500 Malus domestica HOM05D008142 ORTHO05D009674 1.7e-07 59.7 117 37.6
Prupe.4G151600 Prunus persica HOM05D008142 ORTHO05D009674 2.2e-07 59.3 118 36.4
COL.COLO4_17432 Corchorus olitorius HOM05D008142 ORTHO05D009674 2.8e-07 58.9 92 40.2
CSS0032813 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 3.7e-07 58.5 72 48.6
Haze_08481 Corylus avellana HOM05D008142 ORTHO05D009674 4.8e-07 58.2 82 42.7
Cfa019469 Carpinus fangiana HOM05D008142 ORTHO05D009674 8.2e-07 57.4 82 42.7
Dinv13326 Davidia involucrata HOM05D000230 ORTHO05D000176 8.2e-07 57.4 60 53.3
Gohir.D01G033700 Gossypium hirsutum HOM05D008142 ORTHO05D009674 1.4e-06 56.6 71 42.3
Actinidia18850 Actinidia chinensis HOM05D008142 ORTHO05D009674 9.1e-06 53.9 75 44.0
Dinv26679 Davidia involucrata HOM05D008142 ORTHO05D009674 9.1e-06 53.9 82 39.0
Gorai.002G040600 Gossypium raimondii HOM05D008142 ORTHO05D009674 9.1e-06 53.9 71 40.8
Gorai.002G040800 Gossypium raimondii HOM05D008142 ORTHO05D009674 9.1e-06 53.9 71 40.8


User provided reference genes

Program Settings