Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 1.6e-254 882.5 514 100.0
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 4.1e-117 426.0 505 49.7
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 1.5e-103 380.9 470 48.3
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 4.1e-85 319.7 479 47.0
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 4.5e-84 316.2 400 48.5
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 1.9e-82 310.8 532 42.9
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 2.7e-81 307.0 507 42.4
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 2.4e-77 293.9 506 41.3
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 1.6e-76 291.2 477 44.0
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 1.0e-75 288.5 478 41.8
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 1.2e-73 281.6 507 40.6
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 3.0e-72 276.9 470 40.6
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 3.0e-72 276.9 419 43.7
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 1.5e-71 274.6 489 42.9
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 1.5e-71 274.6 476 41.4
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 3.4e-71 273.5 505 38.8
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 1.7e-70 271.2 487 41.1
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 2.9e-70 270.4 473 40.8
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 4.9e-70 269.6 527 39.1
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 7.8e-68 262.3 483 38.1
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 1.0e-67 261.9 473 39.7
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 3.9e-67 260.0 476 40.1
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 1.1e-66 258.5 474 40.1
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 4.3e-66 256.5 481 40.7
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 3.4e-63 246.9 488 37.7
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 9.2e-61 238.8 473 39.1
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 9.2e-61 238.8 489 38.2
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 9.2e-61 238.8 450 38.9
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 2.7e-60 237.3 489 37.6
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 6.6e-59 232.6 463 38.2
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 3.3e-58 230.3 489 37.8
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 4.3e-58 229.9 476 37.6
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 6.2e-57 226.1 464 47.2
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 3.1e-56 223.8 498 34.9
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 9.2e-53 212.2 474 35.2
Aqoxy1G03880 Aquilegia oxysepala HOM05D007962 ORTHO05D009990 2.7e-52 210.7 543 34.6
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 2.7e-52 210.7 541 40.3
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 5.1e-51 206.5 468 36.3
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 8.6e-51 205.7 545 34.3
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 1.5e-50 204.9 369 38.8
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 1.4e-48 198.4 539 39.9
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 3.4e-47 193.7 449 34.1
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 5.8e-47 193.0 451 35.0
Ciclev10010584m.g Citrus clementina HOM05D007962 ORTHO05D009990 2.5e-42 177.6 457 34.4
MD11G1236000 Malus domestica HOM05D007962 ORTHO05D009990 1.1e-40 172.2 411 35.3
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 1.7e-38 164.9 479 33.0
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 1.2e-36 158.7 405 34.3
Hma1.2p1_1176F.1_g264250 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 2.7e-36 157.5 361 35.2
Hma1.2p1_1176F.1_g264255 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 2.7e-36 157.5 361 35.2
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 6.0e-36 156.4 494 30.8
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 3.3e-34 150.6 490 30.4
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 6.9e-32 142.9 456 33.3
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 9.0e-32 142.5 373 32.7
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 1.2e-31 142.1 408 32.6
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 1.5e-31 141.7 447 32.4
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 5.8e-31 139.8 496 31.5
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 5.8e-31 139.8 536 27.6
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 2.9e-30 137.5 479 28.8
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 1.4e-29 135.2 290 33.4
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 1.4e-29 135.2 559 27.5
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 3.2e-29 134.0 323 34.4
CDE11G0480 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 1.6e-28 131.7 170 44.1
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 1.7e-27 128.3 482 28.8
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 3.9e-27 127.1 481 30.1
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 3.9e-27 127.1 571 26.3
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 4.3e-26 123.6 458 27.5
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 1.1e-24 119.0 388 29.6
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 1.4e-24 118.6 486 28.2
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 2.4e-24 117.9 493 28.6
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 5.3e-24 116.7 414 30.7
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 2.0e-23 114.8 420 30.5
FvH4_3g21030 Fragaria vesca HOM05D007962 ORTHO05D009990 3.4e-23 114.0 285 36.1
Medtr8g464490 Medicago truncatula HOM05D007962 ORTHO05D009990 1.3e-22 112.1 494 29.4
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 3.8e-22 110.5 493 27.6
Lsat_1_v5_gn_9_95621 Lactuca sativa HOM05D007962 ORTHO05D009990 1.8e-19 101.7 150 44.0
HanXRQChr13g0393921 Helianthus annuus HOM05D003190 ORTHO05D009990 3.1e-16 90.9 100 50.0
ECA240G4716 Erigeron canadensis HOM05D000200 ORTHO05D001546 9.0e-16 89.4 486 24.5
Sed0012704 Sechium edule HOM05D007962 ORTHO05D009990 5.8e-15 86.7 450 29.6
SEGI_13433 Sequoiadendron giganteum HOM05D007962 ORTHO05D009990 6.9e-08 63.2 95 43.2
CDE05G0459 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 9.0e-08 62.8 170 30.0


User provided reference genes

Program Settings