Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 3.4e-52 208.0 102 100.0
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 1.4e-29 132.9 74 86.5
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 4.1e-29 131.3 74 85.1
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 4.1e-29 131.3 74 85.1
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 4.1e-29 131.3 74 85.1
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 4.1e-29 131.3 74 85.1
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 5.4e-29 131.0 74 85.1
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 1.2e-28 129.8 74 83.8
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 1.2e-28 129.8 74 83.8
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 2.7e-28 128.6 72 84.7
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 3.5e-28 128.3 74 82.4
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 3.5e-28 128.3 74 82.4
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 3.5e-28 128.3 72 84.7
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 5.9e-28 127.5 74 82.4
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 1.0e-27 126.7 72 83.3
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 1.0e-27 126.7 72 83.3
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 1.0e-27 126.7 72 83.3
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 1.7e-27 125.9 72 81.9
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 2.3e-27 125.6 72 81.9
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 2.3e-27 125.6 72 81.9
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 2.3e-27 125.6 72 81.9
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 2.3e-27 125.6 72 83.3
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 2.9e-27 125.2 72 81.9
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 5.0e-27 124.4 72 81.9
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 5.0e-27 124.4 72 80.6
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 6.5e-27 124.0 72 81.9
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 6.5e-27 124.0 72 81.9
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 6.5e-27 124.0 72 81.9
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 6.5e-27 124.0 72 80.6
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 6.5e-27 124.0 72 80.6
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 8.6e-27 123.6 72 81.9
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 8.6e-27 123.6 72 80.6
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 1.1e-26 123.2 72 79.2
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 1.1e-26 123.2 72 80.6
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 1.5e-26 122.9 72 77.8
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 1.5e-26 122.9 72 79.2
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 1.5e-26 122.9 72 79.2
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 1.9e-26 122.5 72 80.6
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 2.5e-26 122.1 72 80.6
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 2.5e-26 122.1 74 81.1
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 2.5e-26 122.1 72 79.2
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 3.3e-26 121.7 72 80.6
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 3.3e-26 121.7 73 80.8
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 3.3e-26 121.7 72 79.2
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 5.5e-26 120.9 72 79.2
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 5.5e-26 120.9 72 81.9
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 7.2e-26 120.6 72 81.9
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 1.2e-25 119.8 74 79.7
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.2e-25 119.8 72 80.6
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.2e-25 119.8 74 78.4
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.2e-25 119.8 74 78.4
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 1.2e-25 119.8 74 78.4
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 1.2e-25 119.8 72 80.6
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 2.1e-25 119.0 72 80.6
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 2.1e-25 119.0 72 80.6
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 3.6e-25 118.2 72 80.6
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 3.6e-25 118.2 72 80.6
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 3.6e-25 118.2 72 79.2
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 4.7e-25 117.9 74 77.0
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 4.7e-25 117.9 72 79.2
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 4.7e-25 117.9 72 79.2
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 4.7e-25 117.9 72 79.2
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 4.7e-25 117.9 72 79.2
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 6.1e-25 117.5 72 77.8
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 6.1e-25 117.5 72 79.2
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 6.1e-25 117.5 72 76.4
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 8.0e-25 117.1 72 79.2
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 8.0e-25 117.1 72 77.8
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 8.0e-25 117.1 72 77.8
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 8.0e-25 117.1 72 79.2
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 8.0e-25 117.1 72 79.2
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 1.0e-24 116.7 72 73.6
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 1.4e-24 116.3 72 79.2
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 1.4e-24 116.3 72 77.8
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 1.4e-24 116.3 71 74.6
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 2.3e-24 115.5 72 79.2
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 2.3e-24 115.5 72 76.4
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 3.0e-24 115.2 72 77.8
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 3.0e-24 115.2 72 77.8
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 3.0e-24 115.2 72 77.8
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 3.0e-24 115.2 72 77.8
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 3.0e-24 115.2 72 77.8
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 3.0e-24 115.2 72 77.8
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 3.0e-24 115.2 72 77.8
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 3.0e-24 115.2 72 77.8
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 3.0e-24 115.2 72 77.8
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 3.0e-24 115.2 72 77.8
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 3.0e-24 115.2 72 77.8
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 3.0e-24 115.2 72 77.8
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 3.0e-24 115.2 72 77.8
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 3.0e-24 115.2 72 77.8
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 3.0e-24 115.2 72 77.8
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 3.0e-24 115.2 72 77.8
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 3.0e-24 115.2 72 77.8
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 3.0e-24 115.2 72 77.8
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 3.0e-24 115.2 72 77.8
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 3.0e-24 115.2 74 77.0
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 3.0e-24 115.2 72 77.8
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 3.0e-24 115.2 72 76.4
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 4.0e-24 114.8 72 72.2
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 5.2e-24 114.4 69 81.2
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 8.9e-24 113.6 72 75.0
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 1.2e-23 113.2 72 76.4
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 1.5e-23 112.8 72 75.0
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 1.5e-23 112.8 72 75.0
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 1.5e-23 112.8 72 75.0
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 4.4e-23 111.3 72 75.0
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 4.9e-22 107.8 68 77.9
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 4.9e-22 107.8 68 77.9
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 4.9e-22 107.8 68 77.9
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 4.9e-22 107.8 68 77.9
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 6.3e-22 107.5 71 69.0
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 6.3e-22 107.5 72 70.8
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 1.4e-21 106.3 72 69.4
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 1.2e-20 103.2 72 66.7
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 3.5e-20 101.7 66 72.7
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 1.7e-19 99.4 71 64.8
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 1.7e-19 99.4 71 59.2
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 3.8e-19 98.2 71 59.2
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 1.5e-18 96.3 71 59.2
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 7.3e-18 94.0 71 57.7
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 1.9e-10 69.3 65 50.8
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 7.3e-10 67.4 72 54.2
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 1.1e-08 63.5 64 48.4
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 8.9e-08 60.5 72 47.2


User provided reference genes

Program Settings