Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0485 Trochodendron aralioides HOM05D004843 ORTHO05D005833 0.0e+00 1255.7 612 100.0
Nn1g06340 Nelumbo nucifera HOM05D004843 ORTHO05D005833 1.5e-206 723.4 614 60.1
GSVIVG01014249001 Vitis vinifera HOM05D004843 ORTHO05D005833 1.6e-184 650.2 607 57.5
Dinv20222 Davidia involucrata HOM05D004843 ORTHO05D005833 8.6e-183 644.4 638 55.2
CSS0025192 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 1.5e-182 643.7 631 53.7
Hma1.2p1_0416F.1_g148560 Hydrangea macrophylla HOM05D004843 ORTHO05D005833 9.6e-182 641.0 645 54.1
Actinidia35229 Actinidia chinensis HOM05D004843 ORTHO05D005833 1.3e-178 630.6 626 53.8
CiPaw.08G115600 Carya illinoinensis HOM05D004843 ORTHO05D005833 2.0e-171 606.7 628 52.7
Cfa019615 Carpinus fangiana HOM05D004843 ORTHO05D005833 1.2e-168 597.4 619 51.7
QL11p026708 Quercus lobata HOM05D004843 ORTHO05D005833 1.9e-166 590.1 673 49.0
Aqoxy4G00544 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 7.4e-166 588.2 558 53.4
TWI38G0787 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 6.4e-162 575.1 607 51.2
Lj1C835G2 Lonicera japonica HOM05D004843 ORTHO05D005833 8.4e-162 574.7 596 52.9
Rhsim04G0023600 Rhododendron simsii HOM05D004843 ORTHO05D005833 3.4e-155 552.7 714 45.8
vmacro09509 Vaccinium macrocarpon HOM05D004843 ORTHO05D005833 2.7e-152 543.1 680 46.8
Oeu024378.1 Olea europaea HOM05D004843 ORTHO05D005833 3.3e-150 536.2 582 49.1
Glyma.12G227600 Glycine max HOM05D004843 ORTHO05D005833 4.1e-148 529.3 583 49.7
Glyma.13G272600 Glycine max HOM05D004843 ORTHO05D005833 2.0e-147 526.9 622 47.6
Nitab4.5_0007508g0020 Nicotiana tabacum HOM05D004843 ORTHO05D005833 2.5e-145 520.0 580 48.3
Ciclev10019192m.g Citrus clementina HOM05D004843 ORTHO05D005833 2.7e-144 516.5 617 48.1
Prupe.4G172200 Prunus persica HOM05D004843 ORTHO05D005833 2.7e-144 516.5 633 47.4
MSTRG.12883 Avicennia marina HOM05D004843 ORTHO05D005833 5.3e-140 502.3 623 45.3
CAN.G765.5 Capsicum annuum HOM05D004843 ORTHO05D005833 9.1e-140 501.5 564 47.9
Lj3g0014260 Lotus japonicus HOM05D004843 ORTHO05D005833 4.5e-139 499.2 625 45.8
Duzib268G0207 Durio zibethinus HOM05D004843 ORTHO05D005833 5.9e-139 498.8 585 46.8
MD10G1064700 Malus domestica HOM05D004843 ORTHO05D005833 5.9e-139 498.8 632 45.4
VMungo1080G1831 Vigna mungo HOM05D004843 ORTHO05D005833 7.7e-139 498.4 616 45.9
Sed0025158 Sechium edule HOM05D004843 ORTHO05D005833 1.0e-138 498.0 603 47.6
Cc05_g11520 Coffea canephora HOM05D004843 ORTHO05D005833 2.9e-138 496.5 568 46.7
Solyc12g014090.2 Solanum lycopersicum HOM05D004843 ORTHO05D005833 2.9e-138 496.5 630 44.0
Phvul.005G067200 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 1.1e-137 494.6 615 45.2
MD03G1237200 Malus domestica HOM05D004843 ORTHO05D005833 1.4e-137 494.2 632 45.1
MELO3C016086.2 Cucumis melo HOM05D004843 ORTHO05D005833 4.2e-137 492.7 618 46.0
Sopen12g005870 Solanum pennellii HOM05D004843 ORTHO05D005833 4.2e-137 492.7 617 44.6
CsaV3_4G008440 Cucumis sativus L. HOM05D004843 ORTHO05D005833 1.6e-136 490.7 626 45.5
PGR031G2553 Punica granatum HOM05D004843 ORTHO05D005833 2.7e-136 490.0 594 47.0
Manes.15G090500 Manihot esculenta HOM05D004843 ORTHO05D005833 1.8e-135 487.3 658 44.1
RcHm_v2.0_Chr6g0312691 Rosa chinensis HOM05D004843 ORTHO05D005833 5.1e-135 485.7 601 46.4
Lj1g0026777 Lotus japonicus HOM05D004843 ORTHO05D005833 2.8e-133 479.9 587 46.7
Nitab4.5_0003077g0040 Nicotiana tabacum HOM05D004843 ORTHO05D005833 1.4e-132 477.6 593 45.0
DCAR_021007 Daucus carota HOM05D004843 ORTHO05D005833 2.4e-132 476.9 612 45.3
RcHm_v2.0_Chr5g0031851 Rosa chinensis HOM05D004843 ORTHO05D005833 5.3e-132 475.7 646 43.5
Eucgr.F03287 Eucalyptus grandis HOM05D004843 ORTHO05D005833 2.0e-131 473.8 617 45.7
SGA_v2.0_scaffold70G23704 Striga asiatica HOM05D004843 ORTHO05D005833 3.4e-131 473.0 559 45.6
FvH4_3g19060 Fragaria vesca HOM05D004843 ORTHO05D005833 7.7e-131 471.9 598 46.2
FAN25G1696 Fragaria x ananassa HOM05D004843 ORTHO05D005833 7.7e-131 471.9 602 46.0
Potri.012G106300 Populus trichocarpa HOM05D004843 ORTHO05D005833 4.2e-129 466.1 635 43.0
Gohir.A04G036900 Gossypium hirsutum HOM05D004843 ORTHO05D005833 1.2e-128 464.5 584 45.5
Gohir.D05G347266 Gossypium hirsutum HOM05D004843 ORTHO05D005833 4.7e-128 462.6 585 45.5
Psat5g240000 Pisum sativum HOM05D004843 ORTHO05D005833 6.1e-128 462.2 634 43.1
Cpa.g.sc131.81 Carica papaya HOM05D004843 ORTHO05D005833 7.9e-128 461.8 609 43.7
TPR.G29644 Trifolium pratense HOM05D004843 ORTHO05D005833 3.9e-127 459.5 596 45.0
ClCG07G009890 Citrullus lanatus HOM05D004843 ORTHO05D005833 2.0e-126 457.2 623 43.7
Gorai.009G374700 Gossypium raimondii HOM05D004843 ORTHO05D005833 2.6e-126 456.8 585 45.6
Lsat_1_v5_gn_5_128660 Lactuca sativa HOM05D004843 ORTHO05D005833 4.4e-126 456.1 582 44.5
Oeu061325.2 Olea europaea HOM05D004843 ORTHO05D005833 7.4e-126 455.3 515 47.4
arahy.Tifrunner.gnm1.ann1.60B7R0 Arachis hypogaea HOM05D004843 ORTHO05D005833 1.3e-125 454.5 607 43.3
AUR62036128 Chenopodium quinoa HOM05D004843 ORTHO05D005833 3.7e-125 453.0 611 43.9
Oeu061997.2 Olea europaea HOM05D004843 ORTHO05D005833 1.8e-124 450.7 568 44.7
arahy.Tifrunner.gnm1.ann1.G1PXE9 Arachis hypogaea HOM05D004843 ORTHO05D005833 7.0e-124 448.7 571 44.8
EL10Ac4g08285 Beta vulgaris HOM05D004843 ORTHO05D005833 7.7e-123 445.3 615 43.9
Lalb_Chr25g0286141 Lupinus albus HOM05D004843 ORTHO05D005833 3.6e-120 436.4 605 42.6
CSS0012812 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 4.7e-120 436.0 440 52.7
PSO832G1805 Papaver somniferum HOM05D004843 ORTHO05D005833 4.7e-120 436.0 596 43.3
Sabra12G0078800 Salix brachista HOM05D004843 ORTHO05D005833 6.1e-120 435.6 691 40.4
Sc03g0010280 Simmondsia chinensis HOM05D004843 ORTHO05D005833 6.7e-119 432.2 597 43.6
Medtr2g078390 Medicago truncatula HOM05D004843 ORTHO05D005833 3.7e-117 426.4 621 41.5
FAN11G0804 Fragaria x ananassa HOM05D004843 ORTHO05D005833 4.8e-117 426.0 598 43.5
HanXRQChr10g0302381 Helianthus annuus HOM05D004843 ORTHO05D005833 4.8e-117 426.0 590 41.7
DCAR_031588 Daucus carota HOM05D004843 ORTHO05D005833 1.2e-115 421.4 546 43.4
Peaxi162Scf00000g02614 Petunia axillaris HOM05D004843 ORTHO05D005833 2.7e-115 420.2 625 39.8
PSO210G0781 Papaver somniferum HOM05D004843 ORTHO05D005833 1.6e-112 411.0 594 42.1
CiPaw.11G165700 Carya illinoinensis HOM05D004843 ORTHO05D005833 8.0e-112 408.7 628 42.0
Migut.H01969 Erythranthe guttata HOM05D004843 ORTHO05D005833 4.8e-109 399.4 613 39.5
Hund13862 Selenicereus undatus HOM05D004843 ORTHO05D005833 1.4e-108 397.9 713 37.3
AUR62019511 Chenopodium quinoa HOM05D004843 ORTHO05D005833 2.9e-106 390.2 550 42.4
SalBow7G4166 Salvia bowleyana HOM05D004843 ORTHO05D005833 5.0e-106 389.4 502 43.6
AUR62026744 Chenopodium quinoa HOM05D004843 ORTHO05D005833 1.6e-104 384.4 505 43.2
MBI02_g30880_MAGBIO Magnolia biondii HOM05D004843 ORTHO05D005833 5.2e-103 379.4 423 50.8
Glyma.13G009900 Glycine max HOM05D004843 ORTHO05D005833 1.2e-99 368.2 506 41.9
ATR0165G025 Amborella trichopoda HOM05D004843 ORTHO05D005833 2.9e-98 363.6 567 39.0
THA.LOC104798752 Tarenaya hassleriana HOM05D004843 ORTHO05D005833 2.6e-94 350.5 591 37.6
CDE10G0946 Ceratophyllum demersum HOM05D004843 ORTHO05D005833 4.9e-93 346.3 470 43.0
SalBow7G4326 Salvia bowleyana HOM05D004843 ORTHO05D005833 3.5e-91 340.1 466 42.7
Phvul.005G068700 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 2.3e-90 337.4 426 43.7
Aa31LG6G6390 Aethionema arabicum HOM05D000944 ORTHO05D003581 1.9e-89 334.3 569 36.9
SEGI_17777 Sequoiadendron giganteum HOM05D004843 ORTHO05D005833 1.2e-88 331.6 566 36.6
Aqoxy7G02743 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 4.0e-87 326.6 267 59.2
Haze_09370 Corylus avellana HOM05D004843 ORTHO05D005833 4.4e-86 323.2 412 44.9
Zm00001eb280030 Zea mays HOM05D004843 ORTHO05D005833 4.9e-85 319.7 565 36.5
Os06g0244100 Oryza sativa ssp. japonica HOM05D004843 ORTHO05D005833 9.2e-84 315.5 568 36.4
Thecc.07G102200 Theobroma cacao HOM05D004843 ORTHO05D005833 5.0e-82 309.7 288 53.1
C06p14590 Brassica napus HOM05D004843 ORTHO05D005833 2.1e-80 304.3 638 34.3
BolC6t36637H Brassica oleracea HOM05D004843 ORTHO05D005833 1.1e-79 302.0 602 34.2
BcaB02g10938 Brassica carinata HOM05D004843 ORTHO05D005833 1.4e-79 301.6 580 35.3
Carub.0001s4239 Capsella rubella HOM05D004843 ORTHO05D005833 5.2e-79 299.7 608 35.4
BcaC08g44060 Brassica carinata HOM05D004843 ORTHO05D005833 6.8e-79 299.3 604 34.3
BraA05t20741Z Brassica rapa HOM05D004843 ORTHO05D005833 6.8e-79 299.3 634 34.2
A05p18490 Brassica napus HOM05D004843 ORTHO05D005833 5.8e-78 296.2 634 34.1
AT1G53200 Arabidopsis thaliana HOM05D004843 ORTHO05D005833 7.5e-78 295.8 597 33.7
AL1G61600 Arabidopsis lyrata HOM05D004843 ORTHO05D005833 1.3e-77 295.0 612 33.7
Thhalv10011326m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 1.7e-77 294.7 593 34.6
Sp1g39780 Schrenkiella parvula HOM05D004843 ORTHO05D005833 6.4e-77 292.7 575 34.6
CARHR043430 Cardamine hirsuta HOM05D004843 ORTHO05D005833 1.4e-76 291.6 578 35.1
HPP92_010831 Vanilla planifolia HOM05D004843 ORTHO05D005833 9.2e-76 288.9 496 37.9
TWI31G0686 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 3.5e-75 287.0 540 36.5
Thhalv10028227m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 1.1e-73 282.0 578 34.6
HPP92_010833 Vanilla planifolia HOM05D004843 ORTHO05D005833 1.2e-70 271.9 391 41.9
ECA234G3172 Erigeron canadensis HOM05D004843 ORTHO05D005833 9.2e-68 262.3 304 47.0
Ca_15018_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 2.1e-67 261.2 421 40.9
unitig_26.g10042 Utricularia gibba HOM05D004843 ORTHO05D005833 8.7e-66 255.8 450 37.6
Atru.chr2.138 Acer truncatum HOM05D004843 ORTHO05D005833 1.5e-65 255.0 225 55.1
Thecc.07G102000 Theobroma cacao HOM05D004843 ORTHO05D005833 4.4e-62 243.4 245 50.6
Oeu018948.1 Olea europaea HOM05D004843 ORTHO05D005833 2.7e-51 207.6 296 42.2
Ca_04025_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 4.6e-51 206.8 416 35.1
CAN.G349.3 Capsicum annuum HOM05D004843 ORTHO05D005833 1.0e-50 205.7 255 46.7
BcaC08g43511 Brassica carinata HOM05D004843 ORTHO05D005833 2.9e-45 187.6 542 30.8
Pp3c12_9280 Physcomitrium patens HOM05D004843 ORTHO05D005833 2.9e-45 187.6 573 26.4
DCAR_032123 Daucus carota HOM05D004843 ORTHO05D005833 8.4e-45 186.0 170 55.9
Mapoly0139s0008 Marchantia polymorpha HOM05D004843 ORTHO05D005833 1.9e-44 184.9 587 27.9
Aa31sc1038G10 Aethionema arabicum HOM05D004843 ORTHO05D005833 9.3e-44 182.6 445 31.0
A06p01130 Brassica napus HOM05D004843 ORTHO05D005833 1.6e-43 181.8 278 39.2
Atru.chr2.140 Acer truncatum HOM05D004843 ORTHO05D005833 6.0e-43 179.9 157 58.0
C06p08970 Brassica napus HOM05D004843 ORTHO05D005833 3.3e-41 174.1 218 44.0
Thecc.07G102300 Theobroma cacao HOM05D004843 ORTHO05D005833 9.6e-41 172.6 181 49.7
BolC6t35976H Brassica oleracea HOM05D004843 ORTHO05D005833 1.3e-40 172.2 239 42.7
Oeu038157.2 Olea europaea HOM05D004843 ORTHO05D005833 4.9e-37 160.2 242 42.6
Thecc.07G101600 Theobroma cacao HOM05D004843 ORTHO05D005833 1.1e-36 159.1 171 46.8
Thecc.07G101400 Theobroma cacao HOM05D004843 ORTHO05D005833 2.5e-36 157.9 161 49.7
Oeu027285.1 Olea europaea HOM05D004843 ORTHO05D005833 1.1e-31 142.5 166 47.0
AagrBONN_evm.TU.Sc2ySwM_228.3860 Anthoceros agrestis HOM05D004843 ORTHO05D005833 5.5e-28 130.2 439 25.3
CAN.G349.2 Capsicum annuum HOM05D004843 ORTHO05D005833 4.8e-24 117.1 139 46.0
BraA06t23340Z Brassica rapa HOM05D004843 ORTHO05D005833 5.3e-23 113.6 167 40.7
SHI27679 Sapria himalayana HOM05D000105 ORTHO05D000023 9.1e-23 112.8 135 43.0
MBI02_g30879_MAGBIO Magnolia biondii HOM05D004843 ORTHO05D005833 4.2e-20 104.0 176 35.2
AagrBONN_evm.TU.Sc2ySwM_228.3857 Anthoceros agrestis HOM05D004843 ORTHO05D005833 2.0e-17 95.1 446 22.0
SHI27676 Sapria himalayana HOM05D004843 ORTHO05D005833 5.7e-17 93.6 377 26.0
Oeu029262.1 Olea europaea HOM05D004843 ORTHO05D005833 6.3e-16 90.1 108 46.3
Oeu052598.1 Olea europaea HOM05D004843 ORTHO05D005833 1.0e-10 72.8 236 27.1
Aqoxy7G02744 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 1.4e-10 72.4 64 50.0
HPP92_010834 Vanilla planifolia HOM05D004843 ORTHO05D005833 5.7e-09 67.0 92 44.6
BraA09t38198Z Brassica rapa HOM05D004843 ORTHO05D005833 1.7e-08 65.5 75 45.3
A09p55300 Brassica napus HOM05D004843 ORTHO05D005833 8.2e-08 63.2 75 44.0
Oeu018912.1 Olea europaea HOM05D004843 ORTHO05D005833 2.0e-06 58.5 46 56.5


User provided reference genes

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