Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0473 Trochodendron aralioides HOM05D007061 ORTHO05D009017 1.1e-248 862.8 438 100.0
Aqoxy2G00253 Aquilegia oxysepala HOM05D007061 ORTHO05D009017 1.0e-209 733.4 440 83.4
Nn7g38366 Nelumbo nucifera HOM05D007061 ORTHO05D009017 6.8e-206 720.7 438 82.2
Potri.010G173800 Populus trichocarpa HOM05D007061 ORTHO05D009017 7.5e-205 717.2 441 80.7
QL04p093744 Quercus lobata HOM05D007061 ORTHO05D009017 2.7e-202 708.8 466 78.3
Sabra10G0133700 Salix brachista HOM05D007061 ORTHO05D009017 1.1e-200 703.4 447 78.7
Ciclev10004974m.g Citrus clementina HOM05D007061 ORTHO05D009017 3.6e-199 698.4 439 79.7
MD10G1216400 Malus domestica HOM05D007061 ORTHO05D009017 1.8e-198 696.0 438 79.2
CsaV3_6G013460 Cucumis sativus L. HOM05D007061 ORTHO05D009017 4.4e-197 691.4 437 77.8
PSO675G0660 Papaver somniferum HOM05D007061 ORTHO05D009017 5.8e-197 691.0 420 83.3
PSO675G3863 Papaver somniferum HOM05D007061 ORTHO05D009017 9.8e-197 690.3 421 82.9
CiPaw.11G057200 Carya illinoinensis HOM05D007061 ORTHO05D009017 1.3e-196 689.9 438 79.0
FvH4_3g14100 Fragaria vesca HOM05D007061 ORTHO05D009017 3.7e-196 688.3 438 78.8
Hma1.2p1_0151F.1_g067030 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 6.4e-196 687.6 439 78.8
Duzib213G0730 Durio zibethinus HOM05D007061 ORTHO05D009017 1.1e-195 686.8 451 77.8
CANSAT35G1572 Cannabis sativa HOM05D007061 ORTHO05D009017 1.4e-195 686.4 439 78.4
Eucgr.K03462 Eucalyptus grandis HOM05D007061 ORTHO05D009017 3.2e-195 685.3 439 76.5
Lalb_Chr03g0031881 Lupinus albus HOM05D007061 ORTHO05D009017 5.4e-195 684.5 438 77.2
RcHm_v2.0_Chr5g0023411 Rosa chinensis HOM05D007061 ORTHO05D009017 5.4e-195 684.5 438 79.5
Gorai.001G051600 Gossypium raimondii HOM05D007061 ORTHO05D009017 9.2e-195 683.7 447 77.4
Gohir.D07G048400 Gossypium hirsutum HOM05D007061 ORTHO05D009017 2.1e-194 682.6 446 77.6
Lj3g0003258 Lotus japonicus HOM05D007061 ORTHO05D009017 2.7e-194 682.2 436 77.5
Glyma.08G234700 Glycine max HOM05D007061 ORTHO05D009017 3.0e-193 678.7 441 75.7
CSS0041382 Camellia sinensis var. sinensis HOM05D007061 ORTHO05D009017 5.1e-193 677.9 407 82.6
Prupe.4G128300 Prunus persica HOM05D007061 ORTHO05D009017 6.6e-193 677.6 407 81.8
ClCG02G018710 Citrullus lanatus HOM05D007061 ORTHO05D009017 1.5e-192 676.4 449 75.3
Ca_23083_v3 Cicer arietinum L. HOM05D007061 ORTHO05D009017 2.1e-191 672.5 435 76.8
THA.LOC104810275 Tarenaya hassleriana HOM05D007061 ORTHO05D009017 2.1e-191 672.5 438 75.1
Psat4g170560 Pisum sativum HOM05D007061 ORTHO05D009017 1.8e-190 669.5 431 76.6
ECA240G0752 Erigeron canadensis HOM05D007061 ORTHO05D009017 5.2e-190 667.9 437 77.3
Manes.16G047900 Manihot esculenta HOM05D007061 ORTHO05D009017 5.2e-190 667.9 428 78.7
HanXRQChr03g0080291 Helianthus annuus HOM05D007061 ORTHO05D009017 6.8e-190 667.5 437 76.2
Actinidia24658 Actinidia chinensis HOM05D007061 ORTHO05D009017 3.4e-189 665.2 432 77.3
arahy.Tifrunner.gnm1.ann1.69KP4R Arachis hypogaea HOM05D007061 ORTHO05D009017 3.4e-189 665.2 432 76.6
Lsat_1_v5_gn_7_70001 Lactuca sativa HOM05D007061 ORTHO05D009017 3.4e-189 665.2 440 76.6
TPR.G9404 Trifolium pratense HOM05D007061 ORTHO05D009017 5.8e-189 664.5 431 76.3
GSVIVG01036723001 Vitis vinifera HOM05D007061 ORTHO05D009017 2.4e-187 659.1 388 83.8
PGR044G2241 Punica granatum HOM05D007061 ORTHO05D009017 7.8e-186 654.1 433 74.6
Lj2A10G39 Lonicera japonica HOM05D007061 ORTHO05D009017 8.6e-185 650.6 466 71.9
ATR0763G190 Amborella trichopoda HOM05D007061 ORTHO05D009017 1.5e-181 639.8 419 75.4
Zm00001eb233280 Zea mays HOM05D007061 ORTHO05D009017 2.6e-181 639.0 415 75.7
AL1G64530 Arabidopsis lyrata HOM05D007061 ORTHO05D009017 5.8e-181 637.9 438 71.0
Sp1g41850 Schrenkiella parvula HOM05D007061 ORTHO05D009017 6.4e-180 634.4 444 70.9
Aa31LG10G30 Aethionema arabicum HOM05D007061 ORTHO05D009017 1.9e-179 632.9 441 68.9
CARHR045980 Cardamine hirsuta HOM05D007061 ORTHO05D009017 4.2e-179 631.7 438 70.1
Thhalv10011478m.g Eutrema salsugineum HOM05D007061 ORTHO05D009017 5.4e-179 631.3 438 68.9
vmacro11681 Vaccinium macrocarpon HOM05D007061 ORTHO05D009017 9.2e-179 630.6 457 71.6
A05p26620 Brassica napus HOM05D007061 ORTHO05D009017 3.9e-177 625.2 410 73.4
BraA05t21537Z Brassica rapa HOM05D007061 ORTHO05D009017 3.9e-177 625.2 410 73.4
BcaB02g10820 Brassica carinata HOM05D007061 ORTHO05D009017 5.6e-176 621.3 444 68.5
Phvul.011G179100 Phaseolus vulgaris HOM05D007061 ORTHO05D009017 7.3e-176 620.9 386 76.9
C05p41210 Brassica napus HOM05D007061 ORTHO05D009017 3.6e-175 618.6 414 72.7
FAN11G3441 Fragaria x ananassa HOM05D007061 ORTHO05D009017 9.0e-174 614.0 399 76.9
unitig_37.g12195 Utricularia gibba HOM05D007061 ORTHO05D009017 8.4e-172 607.4 443 70.0
arahy.Tifrunner.gnm1.ann1.RLLR5G Arachis hypogaea HOM05D007061 ORTHO05D009017 8.7e-169 597.4 647 53.0
SalBow8G1251 Salvia bowleyana HOM05D007061 ORTHO05D009017 1.3e-167 593.6 550 57.8
Carub.0001s4486 Capsella rubella HOM05D007061 ORTHO05D009017 6.9e-166 587.8 388 71.4
Cc05_g16540 Coffea canephora HOM05D007061 ORTHO05D009017 2.6e-165 585.9 396 74.2
Gohir.A07G044000 Gossypium hirsutum HOM05D007061 ORTHO05D009017 1.1e-163 580.5 447 69.4
Peaxi162Scf00452g00232 Petunia axillaris HOM05D007061 ORTHO05D009017 5.4e-163 578.2 433 68.6
FAN25G0842 Fragaria x ananassa HOM05D007061 ORTHO05D009017 2.3e-161 572.8 437 68.4
Nitab4.5_0000029g0190 Nicotiana tabacum HOM05D007061 ORTHO05D009017 6.7e-161 571.2 440 68.4
FAN16G1770 Fragaria x ananassa HOM05D007061 ORTHO05D009017 8.1e-159 564.3 454 66.3
Os02g0173700 Oryza sativa ssp. japonica HOM05D007061 ORTHO05D009017 3.1e-158 562.4 366 74.6
Atru.chr1.57 Acer truncatum HOM05D007061 ORTHO05D009017 2.0e-157 559.7 360 77.2
SGA_v2.0_scaffold186G40180 Striga asiatica HOM05D007061 ORTHO05D009017 1.7e-156 556.6 444 66.2
Dinv42463 Davidia involucrata HOM05D007061 ORTHO05D009017 1.6e-154 550.1 343 80.8
BcaC05g28094 Brassica carinata HOM05D007061 ORTHO05D009017 1.1e-152 543.9 423 65.7
CAN.G943.59 Capsicum annuum HOM05D007061 ORTHO05D009017 1.9e-152 543.1 443 65.5
CDE01G0579 Ceratophyllum demersum HOM05D007061 ORTHO05D009017 1.9e-152 543.1 434 66.4
Cpa.g.sc32.92 Carica papaya HOM05D007061 ORTHO05D009017 5.6e-152 541.6 347 76.4
MELO3C019630.2 Cucumis melo HOM05D007061 ORTHO05D009017 9.6e-152 540.8 350 75.4
SalBow8G1458 Salvia bowleyana HOM05D007061 ORTHO05D009017 2.1e-151 539.7 563 53.5
DCAR_009658 Daucus carota HOM05D007061 ORTHO05D009017 8.2e-151 537.7 338 78.1
Migut.M01505 Erythranthe guttata HOM05D007061 ORTHO05D009017 1.7e-148 530.0 453 63.6
Pp3c22_13410 Physcomitrium patens HOM05D007061 ORTHO05D009017 3.0e-145 519.2 416 61.3
Mapoly0013s0085 Marchantia polymorpha HOM05D007061 ORTHO05D009017 1.1e-139 500.7 420 59.5
AagrBONN_evm.TU.Sc2ySwM_228.3482 Anthoceros agrestis HOM05D007061 ORTHO05D009017 2.5e-139 499.6 406 58.9
Nitab4.5_0002862g0050 Nicotiana tabacum HOM05D007061 ORTHO05D009017 1.0e-137 494.2 481 58.8
AUR62037650 Chenopodium quinoa HOM05D007061 ORTHO05D009017 1.1e-136 490.7 320 74.4
SMO145G0248 Selaginella moellendorffii HOM05D007061 ORTHO05D009017 2.5e-136 489.6 415 58.6
COL.COLO4_24973 Corchorus olitorius HOM05D007061 ORTHO05D009017 4.4e-128 462.2 444 57.4
Thecc.07G189200 Theobroma cacao HOM05D007061 ORTHO05D009017 3.8e-124 449.1 296 76.4
TWI59G0237 Tripterygium wilfordii HOM05D007061 ORTHO05D009017 1.9e-123 446.8 291 74.9
Sed0001021 Sechium edule HOM05D007061 ORTHO05D009017 2.7e-122 443.0 289 76.8
VMungo1127G1118 Vigna mungo HOM05D007061 ORTHO05D009017 1.5e-120 437.2 292 73.6
Sc03g0005020 Simmondsia chinensis HOM05D007061 ORTHO05D009017 8.0e-114 414.8 287 70.7
Cre16.g649400 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 1.3e-103 380.9 441 46.9
BolC5t32863H Brassica oleracea HOM05D007061 ORTHO05D009017 1.5e-99 367.5 246 72.4
Haze_07765 Corylus avellana HOM05D007061 ORTHO05D009017 1.5e-99 367.5 303 65.3
Rhsim06G0244100 Rhododendron simsii HOM05D007061 ORTHO05D009017 1.2e-90 337.8 317 59.3
PRCOL_00003223 Prasinoderma coloniale HOM05D007061 ORTHO05D009017 1.8e-89 334.0 428 43.0
AT1G54310 Arabidopsis thaliana HOM05D007061 ORTHO05D009017 1.6e-82 310.8 218 69.7
MCO09G574 Micromonas commoda HOM05D007061 ORTHO05D009017 2.3e-81 307.0 456 40.1
arahy.Tifrunner.gnm1.ann1.R5CYRF Arachis hypogaea HOM05D007061 ORTHO05D009017 8.9e-81 305.1 226 71.2
MD05G1238000 Malus domestica HOM05D007061 ORTHO05D009017 1.6e-69 267.7 170 78.2
SEGI_31810 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 5.1e-68 262.7 213 63.8
Actinidia26210 Actinidia chinensis HOM05D007061 ORTHO05D009017 1.8e-57 227.6 153 75.8
Rhsim06G0244000 Rhododendron simsii HOM05D007061 ORTHO05D009017 3.2e-54 216.9 174 66.1
SEGI_33801 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 5.3e-49 199.5 137 67.9
HPP92_028078 Vanilla planifolia HOM05D007061 ORTHO05D009017 6.4e-47 192.6 115 82.6
Cre09.g407900 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 9.3e-46 188.7 412 31.6
Hma1.2p1_0151F.1_g067050 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 5.6e-43 179.5 101 86.1
HPP92_028076 Vanilla planifolia HOM05D007061 ORTHO05D009017 1.2e-40 171.8 107 77.6
arahy.Tifrunner.gnm1.ann1.4L0SCR Arachis hypogaea HOM05D007061 ORTHO05D009017 4.5e-40 169.9 104 79.8
SGA_v2.0_scaffold112G31643 Striga asiatica HOM05D007061 ORTHO05D009017 7.1e-38 162.5 100 79.0
SGA_v2.0_scaffold60G20904 Striga asiatica HOM05D007061 ORTHO05D009017 7.1e-38 162.5 100 79.0
RcHm_v2.0_Chr1g0324361 Rosa chinensis HOM05D007061 ORTHO05D009017 6.9e-33 146.0 106 68.9
AUR62041050 Chenopodium quinoa HOM05D007061 ORTHO05D009017 1.1e-19 102.1 62 75.8
Lsat_1_v5_gn_4_131100 Lactuca sativa HOM05D007061 ORTHO05D004266 6.1e-13 79.7 48 72.9
MCO14G211 Micromonas commoda HOM05D027329 ORTHO05D268215 1.8e-12 78.2 205 26.3
Manes.04G057176 Manihot esculenta HOM05D007061 ORTHO05D005365 1.3e-10 72.0 46 76.1
Lsat_1_v5_gn_0_28960 Lactuca sativa HOM05D004968 ORTHO05D005922 1.8e-09 68.2 47 76.6
Lsat_1_v5_gn_3_11400 Lactuca sativa HOM05D003461 ORTHO05D004386 4.1e-09 67.0 79 49.4
MD05G1238100 Malus domestica HOM05D007061 ORTHO05D009017 1.2e-08 65.5 43 76.7


User provided reference genes

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