Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0466 Trochodendron aralioides HOM05D007052 ORTHO05D008871 7.4e-92 340.5 170 100.0
GSVIVG01012660001 Vitis vinifera HOM05D007052 ORTHO05D008871 1.7e-67 259.6 170 75.9
Potri.011G010300 Populus trichocarpa HOM05D007052 ORTHO05D008871 3.7e-67 258.5 165 78.2
Rhsim02G0105300 Rhododendron simsii HOM05D007052 ORTHO05D008871 1.1e-66 256.9 185 73.5
vmacro15801 Vaccinium macrocarpon HOM05D007052 ORTHO05D008871 9.1e-66 253.8 182 71.4
Cc09_g01290 Coffea canephora HOM05D007052 ORTHO05D008871 1.2e-65 253.4 169 72.2
TWI38G1879 Tripterygium wilfordii HOM05D007052 ORTHO05D008871 2.0e-65 252.7 169 75.1
Aqoxy1G03011 Aquilegia oxysepala HOM05D007052 ORTHO05D008871 7.7e-65 250.8 169 75.7
Cfa000169 Carpinus fangiana HOM05D007052 ORTHO05D008871 2.9e-64 248.8 172 74.4
Sabra11G0007900 Salix brachista HOM05D007052 ORTHO05D008871 8.5e-64 247.3 165 74.5
VMungo0540G2459 Vigna mungo HOM05D007052 ORTHO05D008871 1.1e-63 246.9 172 73.8
Dinv20100 Davidia involucrata HOM05D007052 ORTHO05D008871 1.5e-63 246.5 169 76.9
Haze_06850 Corylus avellana HOM05D007052 ORTHO05D008871 1.9e-63 246.1 172 74.4
Lj1A1235T90 Lonicera japonica HOM05D007052 ORTHO05D008871 2.5e-63 245.7 162 74.7
Sc05g0009410 Simmondsia chinensis HOM05D007052 ORTHO05D008871 7.2e-63 244.2 165 75.2
Duzib235G0934 Durio zibethinus HOM05D007052 ORTHO05D008871 9.5e-63 243.8 168 73.8
Glyma.15G111400 Glycine max HOM05D007052 ORTHO05D008871 9.5e-63 243.8 170 72.4
Manes.17G028000 Manihot esculenta HOM05D007052 ORTHO05D008871 3.6e-62 241.9 169 73.4
Glyma.09G007000 Glycine max HOM05D007052 ORTHO05D008871 6.1e-62 241.1 170 71.8
MD10G1325900 Malus domestica HOM05D007052 ORTHO05D008871 3.0e-61 238.8 172 74.4
Thecc.06G227100 Theobroma cacao HOM05D007052 ORTHO05D008871 4.0e-61 238.4 166 72.3
Phvul.006G146300 Phaseolus vulgaris HOM05D007052 ORTHO05D008871 6.8e-61 237.7 167 70.7
MD05G1351600 Malus domestica HOM05D007052 ORTHO05D008871 2.0e-60 236.1 172 73.3
Ciclev10016958m.g Citrus clementina HOM05D007052 ORTHO05D008871 5.7e-60 234.6 169 72.2
EL10Ac8g20122 Beta vulgaris HOM05D007052 ORTHO05D008871 1.7e-59 233.0 171 69.0
Ca_00688_v3 Cicer arietinum L. HOM05D007052 ORTHO05D008871 2.2e-59 232.6 172 69.2
Gohir.A10G011300 Gossypium hirsutum HOM05D007052 ORTHO05D008871 2.8e-59 232.3 128 86.7
Gorai.011G012000 Gossypium raimondii HOM05D007052 ORTHO05D008871 2.8e-59 232.3 128 86.7
Lsat_1_v5_gn_1_129560 Lactuca sativa HOM05D007052 ORTHO05D008871 2.8e-59 232.3 167 71.3
PGR042G3505 Punica granatum HOM05D007052 ORTHO05D008871 3.7e-59 231.9 132 84.1
arahy.Tifrunner.gnm1.ann1.LNF63F Arachis hypogaea HOM05D007052 ORTHO05D008871 2.4e-58 229.2 165 69.7
arahy.Tifrunner.gnm1.ann1.MS5PCD Arachis hypogaea HOM05D007052 ORTHO05D008871 2.4e-58 229.2 165 69.7
CANSAT56G3240 Cannabis sativa HOM05D007052 ORTHO05D008871 2.4e-58 229.2 175 66.9
Gohir.D06G156800 Gossypium hirsutum HOM05D007052 ORTHO05D008871 9.2e-58 227.3 167 70.1
THA.LOC104812978 Tarenaya hassleriana HOM05D007052 ORTHO05D008871 3.5e-57 225.3 174 68.4
AT4G04330 Arabidopsis thaliana HOM05D007052 ORTHO05D008871 4.5e-57 224.9 167 70.7
Actinidia11870 Actinidia chinensis HOM05D007052 ORTHO05D008871 5.9e-57 224.6 124 87.1
CARHR253150 Cardamine hirsuta HOM05D007052 ORTHO05D008871 7.7e-57 224.2 171 69.6
Lj6g0012328 Lotus japonicus HOM05D007052 ORTHO05D008871 7.7e-57 224.2 177 67.2
Medtr2g024300 Medicago truncatula HOM05D007052 ORTHO05D008871 7.7e-57 224.2 171 67.8
BcaC04g21282 Brassica carinata HOM05D007052 ORTHO05D008871 1.0e-56 223.8 136 81.6
A09p26390 Brassica napus HOM05D007052 ORTHO05D008871 1.0e-56 223.8 136 81.6
C09p33580 Brassica napus HOM05D007052 ORTHO05D008871 1.0e-56 223.8 136 81.6
BolC9t56192H Brassica oleracea HOM05D007052 ORTHO05D008871 1.0e-56 223.8 136 81.6
BraA09t38213Z Brassica rapa HOM05D007052 ORTHO05D008871 1.0e-56 223.8 136 81.6
Lalb_Chr18g0056571 Lupinus albus HOM05D007052 ORTHO05D008871 1.0e-56 223.8 173 69.4
BcaB01g01799 Brassica carinata HOM05D007052 ORTHO05D008871 3.8e-56 221.9 167 70.1
Carub.0006s3216 Capsella rubella HOM05D007052 ORTHO05D008871 3.8e-56 221.9 171 70.2
Sp6g04520 Schrenkiella parvula HOM05D007052 ORTHO05D008871 5.0e-56 221.5 171 69.0
PSO675G2240 Papaver somniferum HOM05D007052 ORTHO05D008871 6.6e-56 221.1 173 68.8
Eucgr.E03993 Eucalyptus grandis HOM05D007052 ORTHO05D008871 1.9e-55 219.5 173 67.1
SGA_v2.0_scaffold7G03781 Striga asiatica HOM05D007052 ORTHO05D008871 1.9e-55 219.5 165 66.1
TPR.G13090 Trifolium pratense HOM05D007052 ORTHO05D008871 9.5e-55 217.2 172 66.3
PSO541G4001 Papaver somniferum HOM05D007052 ORTHO05D008871 1.2e-54 216.9 174 68.4
MELO3C007415.2 Cucumis melo HOM05D007052 ORTHO05D008871 2.8e-54 215.7 186 62.9
ATR0624G054 Amborella trichopoda HOM05D007052 ORTHO05D008871 4.7e-54 214.9 143 75.5
Sed0006602 Sechium edule HOM05D007052 ORTHO05D008871 4.7e-54 214.9 168 66.7
AL6G47870 Arabidopsis lyrata HOM05D007052 ORTHO05D008871 8.0e-54 214.2 124 84.7
Gohir.A06G150600 Gossypium hirsutum HOM05D007052 ORTHO05D008871 8.0e-54 214.2 166 66.9
Aa31LG9G9870 Aethionema arabicum HOM05D007052 ORTHO05D008871 1.0e-53 213.8 162 69.8
QL05p072067 Quercus lobata HOM05D007052 ORTHO05D008871 6.8e-53 211.1 229 53.3
ECA248G2484 Erigeron canadensis HOM05D007052 ORTHO05D008871 8.9e-53 210.7 123 83.7
CSS0050367 Camellia sinensis var. sinensis HOM05D007052 ORTHO05D008871 1.5e-52 209.9 121 84.3
CDE07G0375 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 3.4e-52 208.8 124 79.0
HanXRQChr01g0006501 Helianthus annuus HOM05D007052 ORTHO05D008871 4.4e-52 208.4 168 64.9
Sopen02g025730 Solanum pennellii HOM05D007052 ORTHO05D008871 3.7e-51 205.3 168 63.1
CsaV3_6G048750 Cucumis sativus L. HOM05D007052 ORTHO05D008871 6.4e-51 204.5 135 76.3
CAN.G1014.43 Capsicum annuum HOM05D007052 ORTHO05D008871 1.1e-50 203.8 166 60.8
Migut.M01374 Erythranthe guttata HOM05D007052 ORTHO05D008871 3.2e-50 202.2 168 66.7
AUR62012751 Chenopodium quinoa HOM05D007052 ORTHO05D008871 2.7e-49 199.1 171 63.2
Os08g0425200 Oryza sativa ssp. japonica HOM05D007052 ORTHO05D008871 3.5e-49 198.7 127 73.2
DCAR_024989 Daucus carota HOM05D007052 ORTHO05D008871 2.3e-48 196.1 122 77.0
ClCG01G021710 Citrullus lanatus HOM05D007052 ORTHO05D008871 6.6e-48 194.5 148 69.6
COL.COLO4_31826 Corchorus olitorius HOM05D007052 ORTHO05D008871 6.6e-48 194.5 120 79.2
Solyc02g081060.4 Solanum lycopersicum HOM05D007052 ORTHO05D008871 9.5e-47 190.7 120 75.0
Hund21433 Selenicereus undatus HOM05D007052 ORTHO05D008871 2.1e-46 189.5 202 53.0
Hund23440 Selenicereus undatus HOM05D007052 ORTHO05D008871 3.1e-45 185.7 123 72.4
Ah.09g234570 Amaranthus hybridus HOM05D007052 ORTHO05D008871 2.6e-44 182.6 155 63.2
PGSC0003DMG400016462 Solanum tuberosum HOM05D007052 ORTHO05D008871 2.6e-44 182.6 117 73.5
Pp3c25_6660 Physcomitrium patens HOM05D007052 ORTHO05D008871 1.1e-42 177.2 156 62.2
Peaxi162Scf00178g00039 Petunia axillaris HOM05D007052 ORTHO05D008871 1.4e-42 176.8 127 69.3
AagrBONN_evm.TU.Sc2ySwM_117.3173 Anthoceros agrestis HOM05D007052 ORTHO05D008871 1.7e-40 169.9 120 66.7
AUR62021907 Chenopodium quinoa HOM05D007052 ORTHO05D008871 1.1e-39 167.2 159 57.9
SMO118G0387 Selaginella moellendorffii HOM05D007052 ORTHO05D008871 9.5e-39 164.1 118 61.9
RcHm_v2.0_Chr5g0002341 Rosa chinensis HOM05D007052 ORTHO05D008871 1.2e-38 163.7 137 67.2
Nn1g07250 Nelumbo nucifera HOM05D007052 ORTHO05D008871 2.1e-38 162.9 88 87.5
Prupe.4G016000 Prunus persica HOM05D007052 ORTHO05D008871 1.4e-37 160.2 125 67.2
CiPaw.09G097200 Carya illinoinensis HOM05D007052 ORTHO05D008871 1.2e-36 157.1 123 68.3
Atru.chr10.2273 Acer truncatum HOM05D007052 ORTHO05D008871 2.1e-33 146.4 116 69.8
Psat1g177840 Pisum sativum HOM05D007052 ORTHO05D008871 3.9e-32 142.1 124 62.1
SalBow8G1921 Salvia bowleyana HOM05D007052 ORTHO05D008871 1.9e-31 139.8 111 63.1
Thhalv10029002m.g Eutrema salsugineum HOM05D007052 ORTHO05D008871 4.3e-31 138.7 124 66.9
RcHm_v2.0_Chr7g0236991 Rosa chinensis HOM05D007052 ORTHO05D008871 3.6e-30 135.6 165 52.1
Gorai.010G183200 Gossypium raimondii HOM05D007052 ORTHO05D008871 6.8e-29 131.3 167 47.9
arahy.Tifrunner.gnm1.ann1.ZUMJ7A Arachis hypogaea HOM05D007052 ORTHO05D008871 8.9e-29 131.0 119 59.7
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 5.1e-24 115.2 87 69.0
Zm00001eb179210 Zea mays HOM05D007052 ORTHO05D008871 6.2e-22 108.2 114 55.3
Cre07.g339000 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 1.3e-19 100.5 125 45.6
RcHm_v2.0_Chr5g0002331 Rosa chinensis HOM05D007052 ORTHO05D008871 2.1e-17 93.2 46 95.7
FAN21G0414 Fragaria x ananassa HOM05D007052 ORTHO05D008871 2.7e-17 92.8 85 65.9
PRCOL_00003846 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 4.3e-15 85.5 123 39.0
FAN25G3667 Fragaria x ananassa HOM05D007052 ORTHO05D008871 2.1e-14 83.2 43 88.4
Cre01.g030350 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 3.6e-14 82.4 123 41.5
MSTRG.7177 Avicennia marina HOM05D007052 ORTHO05D008871 2.2e-11 73.2 48 72.9
Nitab4.5_0001409g0190 Nicotiana tabacum HOM05D007052 ORTHO05D008871 2.9e-11 72.8 51 64.7
MCO13G382 Micromonas commoda HOM05D007052 ORTHO05D008871 3.8e-11 72.4 179 31.8
PRCOL_00004464 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 1.2e-09 67.4 119 31.9
Nitab4.5_0007209g0010 Nicotiana tabacum HOM05D007052 ORTHO05D008871 2.1e-09 66.6 39 71.8
PRCOL_00003373 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 1.1e-07 60.8 127 33.9
MCO14G271 Micromonas commoda HOM05D007052 ORTHO05D008871 1.5e-07 60.5 120 35.0
HPP92_027275 Vanilla planifolia HOM05D007052 ORTHO05D008871 3.7e-06 55.8 41 63.4


User provided reference genes

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