Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 1.4e-159 566.2 282 100.0
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 3.9e-130 468.4 332 74.4
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 6.7e-130 467.6 332 74.1
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 4.3e-129 464.9 332 72.6
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 4.8e-128 461.5 332 72.9
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 4.8e-128 461.5 332 73.5
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 1.4e-127 459.9 332 72.0
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.4e-127 459.9 332 72.0
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 1.4e-127 459.9 332 72.9
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 1.4e-127 459.9 332 71.7
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.8e-127 459.5 332 72.0
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 3.1e-127 458.8 332 72.9
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 3.1e-127 458.8 332 73.2
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 3.1e-127 458.8 332 72.3
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 4.0e-127 458.4 332 72.6
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 5.3e-127 458.0 332 72.6
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 5.3e-127 458.0 332 72.0
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 6.9e-127 457.6 331 72.2
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 9.0e-127 457.2 332 72.0
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 1.5e-126 456.4 332 72.9
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 2.0e-126 456.1 332 72.0
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 2.0e-126 456.1 331 71.6
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 2.0e-126 456.1 331 71.9
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 2.6e-126 455.7 332 72.6
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 5.8e-126 454.5 332 71.7
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 1.0e-125 453.8 332 71.7
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 1.3e-125 453.4 332 70.8
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 1.3e-125 453.4 331 71.0
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 1.7e-125 453.0 332 71.4
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 1.7e-125 453.0 331 71.6
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 3.8e-125 451.8 332 72.3
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 3.8e-125 451.8 331 71.3
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 5.0e-125 451.4 332 72.3
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 5.0e-125 451.4 331 70.7
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 8.4e-125 450.7 331 71.6
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 1.9e-124 449.5 348 68.7
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 2.5e-124 449.1 332 70.5
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 2.5e-124 449.1 350 68.3
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 2.5e-124 449.1 350 68.3
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 3.2e-124 448.7 332 70.5
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 4.2e-124 448.4 331 71.3
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 2.1e-123 446.0 332 69.3
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 3.5e-123 445.3 353 68.6
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 3.5e-123 445.3 335 70.7
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 1.3e-122 443.4 331 70.1
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 1.8e-122 443.0 332 69.3
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 2.3e-122 442.6 332 69.3
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 1.5e-121 439.9 331 69.5
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 1.5e-121 439.9 332 69.0
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 1.5e-121 439.9 332 68.1
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 1.9e-121 439.5 332 68.1
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 1.9e-121 439.5 332 69.0
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 2.5e-121 439.1 332 69.3
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 2.5e-121 439.1 332 68.7
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 3.3e-121 438.7 332 69.0
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 4.3e-121 438.3 332 69.0
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 4.3e-121 438.3 331 68.9
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 5.7e-121 438.0 331 69.2
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 7.4e-121 437.6 332 69.9
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 7.4e-121 437.6 332 69.3
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 9.7e-121 437.2 332 68.7
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 9.7e-121 437.2 332 68.7
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 1.6e-120 436.4 332 68.1
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 2.8e-120 435.6 332 69.0
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 2.8e-120 435.6 332 67.8
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 4.8e-120 434.9 332 69.3
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 4.8e-120 434.9 330 69.1
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 4.8e-120 434.9 332 68.7
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 8.2e-120 434.1 331 68.6
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 1.1e-119 433.7 332 69.0
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 1.4e-119 433.3 332 68.7
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 1.8e-119 433.0 332 68.4
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 2.4e-119 432.6 332 67.8
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 2.4e-119 432.6 332 68.1
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 4.1e-119 431.8 332 68.7
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 5.3e-119 431.4 331 68.6
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 5.3e-119 431.4 331 68.3
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 6.9e-119 431.0 330 68.2
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 1.5e-118 429.9 333 68.8
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 1.5e-118 429.9 332 66.9
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 2.6e-118 429.1 330 68.2
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 7.7e-118 427.6 333 68.5
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 2.2e-117 426.0 347 66.3
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 3.8e-117 425.2 332 66.9
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 8.5e-117 424.1 332 66.6
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 6.1e-115 417.9 336 65.8
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 7.9e-115 417.5 331 66.8
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 4.8e-112 408.3 336 64.9
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 3.2e-108 395.6 327 65.4
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 4.7e-107 391.7 304 69.4
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 5.1e-106 388.3 332 61.7
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 1.2e-102 377.1 332 62.3
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 2.6e-102 375.9 332 62.3
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 8.8e-98 360.9 279 70.3
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 6.5e-93 344.7 314 62.4
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 8.5e-93 344.4 330 54.2
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 1.6e-91 340.1 332 55.7
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 1.4e-90 337.0 333 54.1
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 5.4e-87 325.1 320 57.5
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 2.5e-84 316.2 329 51.7
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 8.8e-82 307.8 296 58.4
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 1.6e-75 287.0 354 47.7
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 2.1e-75 286.6 233 65.7
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 3.0e-74 282.7 231 65.4
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 5.2e-74 282.0 233 64.8
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 9.2e-71 271.2 243 61.3
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 2.0e-70 270.0 221 67.0
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.6e-62 243.8 185 68.1
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.6e-62 243.8 185 68.1
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 6.6e-61 238.4 213 60.6
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 4.7e-59 232.3 184 66.3
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 1.5e-57 227.3 185 63.2
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 5.8e-57 225.3 361 37.7
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 2.1e-46 190.3 117 79.5
Cc07_g03900 Coffea canephora HOM05D005960 ORTHO05D007537 1.8e-42 177.2 102 82.4
AUR62018149 Chenopodium quinoa HOM05D005960 ORTHO05D007537 1.7e-40 170.6 100 83.0
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 7.4e-28 128.6 264 31.8
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 6.2e-27 125.6 91 75.8
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 1.1e-26 124.8 279 33.7
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 4.0e-26 122.9 352 31.8
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 9.3e-23 111.7 283 27.6
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 1.9e-20 104.0 95 51.6
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 1.2e-17 94.7 51 80.4
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 2.2e-16 90.5 306 26.1
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 9.3e-15 85.1 83 41.0
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 1.0e-08 65.1 37 89.2
Zm00001eb030310 Zea mays HOM05D005960 ORTHO05D051632 9.3e-07 58.5 52 59.6
Zm00001eb250570 Zea mays HOM05D005960 ORTHO05D051632 2.1e-06 57.4 56 55.4


User provided reference genes

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