Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0431 Trochodendron aralioides HOM05D004029 ORTHO05D004613 7.6e-183 643.7 314 100.0
Duzib268G1628 Durio zibethinus HOM05D004029 ORTHO05D004613 5.4e-165 584.3 306 89.9
COL.COLO4_03559 Corchorus olitorius HOM05D004029 ORTHO05D004613 1.6e-164 582.8 306 89.9
Thecc.07G074600 Theobroma cacao HOM05D004029 ORTHO05D004613 1.8e-163 579.3 306 89.2
Duzib213G0443 Durio zibethinus HOM05D004029 ORTHO05D004613 3.3e-162 575.1 306 87.9
CANSAT11G2434 Cannabis sativa HOM05D004029 ORTHO05D004613 2.4e-160 568.9 306 87.9
CiPaw.11G174500 Carya illinoinensis HOM05D004029 ORTHO05D004613 3.1e-160 568.5 306 89.5
Gohir.D01G054200 Gossypium hirsutum HOM05D004029 ORTHO05D004613 3.1e-160 568.5 306 87.3
Gorai.002G074000 Gossypium raimondii HOM05D004029 ORTHO05D004613 3.1e-160 568.5 306 87.3
Actinidia05171 Actinidia chinensis HOM05D004029 ORTHO05D004613 4.0e-160 568.2 306 87.6
Eucgr.F03341 Eucalyptus grandis HOM05D004029 ORTHO05D004613 6.9e-160 567.4 306 87.9
GSVIVG01014409001 Vitis vinifera HOM05D004029 ORTHO05D004613 6.9e-160 567.4 306 88.6
CSS0001233 Camellia sinensis var. sinensis HOM05D004029 ORTHO05D004613 1.2e-159 566.6 306 88.9
CSS0038840 Camellia sinensis var. sinensis HOM05D004029 ORTHO05D004613 1.2e-159 566.6 306 88.9
Gohir.A01G067000 Gossypium hirsutum HOM05D004029 ORTHO05D004613 1.2e-159 566.6 304 87.5
MD03G1222200 Malus domestica HOM05D004029 ORTHO05D004613 1.2e-159 566.6 306 88.6
Prupe.4G187500 Prunus persica HOM05D004029 ORTHO05D004613 1.5e-159 566.2 306 88.2
MD11G1239600 Malus domestica HOM05D004029 ORTHO05D004613 2.6e-159 565.5 306 88.2
Nn1g03970 Nelumbo nucifera HOM05D004029 ORTHO05D004613 3.4e-159 565.1 307 88.6
TWI38G0763 Tripterygium wilfordii HOM05D004029 ORTHO05D004613 1.3e-158 563.1 306 86.9
Cfa020529 Carpinus fangiana HOM05D004029 ORTHO05D004613 2.2e-158 562.4 313 86.3
CsaV3_3G044490 Cucumis sativus L. HOM05D004029 ORTHO05D004613 6.5e-158 560.8 306 88.2
Sc03g0009690 Simmondsia chinensis HOM05D004029 ORTHO05D004613 1.1e-157 560.1 306 85.9
Sed0019496 Sechium edule HOM05D004029 ORTHO05D004613 2.5e-157 558.9 301 89.0
AUR62015624 Chenopodium quinoa HOM05D004029 ORTHO05D004613 5.5e-157 557.8 306 85.6
Ah.06g183680 Amaranthus hybridus HOM05D004029 ORTHO05D004613 9.3e-157 557.0 306 85.3
AUR62029337 Chenopodium quinoa HOM05D004029 ORTHO05D004613 1.2e-156 556.6 306 85.3
PGR031G0420 Punica granatum HOM05D004029 ORTHO05D004613 1.2e-156 556.6 306 86.3
EL10Ac4g08092 Beta vulgaris HOM05D004029 ORTHO05D004613 1.3e-155 553.1 306 84.6
RcHm_v2.0_Chr5g0034971 Rosa chinensis HOM05D004029 ORTHO05D004613 1.8e-155 552.7 306 86.3
QL08p019114 Quercus lobata HOM05D004029 ORTHO05D004613 5.1e-155 551.2 306 87.6
DCAR_013079 Daucus carota HOM05D004029 ORTHO05D004613 6.7e-155 550.8 306 84.6
Medtr2g080050 Medicago truncatula HOM05D004029 ORTHO05D004613 6.7e-155 550.8 306 86.3
Aqoxy7G04099 Aquilegia oxysepala HOM05D004029 ORTHO05D004613 8.7e-155 550.4 311 84.9
Ca_01815_v3 Cicer arietinum L. HOM05D004029 ORTHO05D004613 8.7e-155 550.4 306 86.6
Ca_30535_v3 Cicer arietinum L. HOM05D004029 ORTHO05D004613 8.7e-155 550.4 306 86.6
Lj1C850G7 Lonicera japonica HOM05D004029 ORTHO05D004613 8.7e-155 550.4 307 86.3
Psat5g246120 Pisum sativum HOM05D004029 ORTHO05D004613 8.7e-155 550.4 306 86.6
Glyma.12G220900 Glycine max HOM05D004029 ORTHO05D004613 1.5e-154 549.7 306 85.9
FAN11G1114 Fragaria x ananassa HOM05D004029 ORTHO05D004613 1.9e-154 549.3 306 85.3
FAN16G1973 Fragaria x ananassa HOM05D004029 ORTHO05D004613 1.9e-154 549.3 306 85.3
FAN25G1694 Fragaria x ananassa HOM05D004029 ORTHO05D004613 1.9e-154 549.3 306 85.3
Glyma.13G280700 Glycine max HOM05D004029 ORTHO05D004613 2.5e-154 548.9 306 85.6
Lalb_Chr25g0286611 Lupinus albus HOM05D004029 ORTHO05D004613 2.5e-154 548.9 306 85.9
FAN21G1497 Fragaria x ananassa HOM05D004029 ORTHO05D004613 5.7e-154 547.7 306 85.0
Manes.03G114700 Manihot esculenta HOM05D004029 ORTHO05D004613 5.7e-154 547.7 306 85.3
Potri.011G123900 Populus trichocarpa HOM05D004029 ORTHO05D004613 7.4e-154 547.4 306 84.6
FvH4_3g20750 Fragaria vesca HOM05D004029 ORTHO05D004613 9.6e-154 547.0 306 85.0
Lj3g0020332 Lotus japonicus HOM05D004029 ORTHO05D004613 1.6e-153 546.2 306 86.3
Sabra11G0109200 Salix brachista HOM05D004029 ORTHO05D004613 1.6e-153 546.2 306 84.3
Hund02202 Selenicereus undatus HOM05D004029 ORTHO05D004613 1.6e-153 546.2 306 84.3
arahy.Tifrunner.gnm1.ann1.3J4V9H Arachis hypogaea HOM05D004029 ORTHO05D004613 2.1e-153 545.8 308 84.4
CAN.G162.91 Capsicum annuum HOM05D004029 ORTHO05D004613 2.8e-153 545.4 306 84.3
Phvul.005G085200 Phaseolus vulgaris HOM05D004029 ORTHO05D004613 4.8e-153 544.7 306 85.0
HanXRQChr10g0289491 Helianthus annuus HOM05D004029 ORTHO05D004613 6.2e-153 544.3 306 84.6
Lsat_1_v5_gn_9_95861 Lactuca sativa HOM05D004029 ORTHO05D004613 1.1e-152 543.5 306 84.6
Solyc07g063440.3 Solanum lycopersicum HOM05D004029 ORTHO05D004613 1.4e-152 543.1 301 85.0
Sopen07g031610 Solanum pennellii HOM05D004029 ORTHO05D004613 1.4e-152 543.1 301 85.0
Peaxi162Scf01111g00112 Petunia axillaris HOM05D004029 ORTHO05D004613 2.4e-152 542.3 306 83.3
Gorai.007G319300 Gossypium raimondii HOM05D004029 ORTHO05D004613 5.3e-152 541.2 306 81.7
Gohir.1Z049674 Gossypium hirsutum HOM05D004029 ORTHO05D004613 6.9e-152 540.8 305 84.3
Thhalv10012467m.g Eutrema salsugineum HOM05D004029 ORTHO05D004613 2.6e-151 538.9 301 85.0
THA.LOC104811852 Tarenaya hassleriana HOM05D004029 ORTHO05D004613 2.6e-151 538.9 306 83.7
AT5G54440 Arabidopsis thaliana HOM05D004029 ORTHO05D004613 3.4e-151 538.5 301 85.4
CARHR267710 Cardamine hirsuta HOM05D004029 ORTHO05D004613 4.5e-151 538.1 301 84.7
Carub.0008s1474 Capsella rubella HOM05D004029 ORTHO05D004613 5.8e-151 537.7 301 85.0
PSO541G4143 Papaver somniferum HOM05D004029 ORTHO05D004613 7.6e-151 537.3 302 84.8
Lalb_Chr01g0016971 Lupinus albus HOM05D004029 ORTHO05D004613 1.3e-150 536.6 306 84.3
PSO675G2841 Papaver somniferum HOM05D004029 ORTHO05D004613 1.7e-150 536.2 302 84.8
Rhsim06G0193700 Rhododendron simsii HOM05D004029 ORTHO05D004613 8.4e-150 533.9 288 88.2
Sp6g16420 Schrenkiella parvula HOM05D004029 ORTHO05D004613 8.4e-150 533.9 301 84.4
BcaC03g14313 Brassica carinata HOM05D004029 ORTHO05D004613 7.1e-149 530.8 301 83.1
C02p17030 Brassica napus HOM05D004029 ORTHO05D004613 7.1e-149 530.8 301 83.1
BolC2t07800H Brassica oleracea HOM05D004029 ORTHO05D004613 7.1e-149 530.8 301 83.1
BcaB05g22133 Brassica carinata HOM05D004029 ORTHO05D004613 9.3e-149 530.4 301 83.1
BraA02t06097Z Brassica rapa HOM05D004029 ORTHO05D004613 9.3e-149 530.4 301 83.1
Migut.H01912 Erythranthe guttata HOM05D004029 ORTHO05D004613 1.6e-148 529.6 306 81.0
A02p10290 Brassica napus HOM05D004029 ORTHO05D004613 2.1e-148 529.3 301 82.7
Aa31LG3G10350 Aethionema arabicum HOM05D004029 ORTHO05D004613 3.5e-148 528.5 310 81.0
ECA240G1154 Erigeron canadensis HOM05D004029 ORTHO05D004613 4.6e-148 528.1 306 83.0
vmacro11822 Vaccinium macrocarpon HOM05D004029 ORTHO05D004613 6.1e-148 527.7 285 88.4
Psat3g119680 Pisum sativum HOM05D004029 ORTHO05D004613 1.0e-147 526.9 306 84.0
ATR0064G128 Amborella trichopoda HOM05D004029 ORTHO05D004613 1.3e-147 526.6 307 81.8
MSTRG.12924 Avicennia marina HOM05D004029 ORTHO05D004613 3.0e-147 525.4 306 80.7
arahy.Tifrunner.gnm1.ann1.IWX37I Arachis hypogaea HOM05D004029 ORTHO05D004613 5.1e-147 524.6 332 78.3
BcaB08g35795 Brassica carinata HOM05D004029 ORTHO05D004613 6.7e-147 524.2 301 82.4
C09p44730 Brassica napus HOM05D004029 ORTHO05D004613 2.5e-146 522.3 301 82.1
BcaC04g20340 Brassica carinata HOM05D004029 ORTHO05D004613 3.3e-146 521.9 301 82.1
BolC9t57346H Brassica oleracea HOM05D004029 ORTHO05D004613 3.3e-146 521.9 301 82.1
BraA10t43261Z Brassica rapa HOM05D004029 ORTHO05D004613 1.3e-145 520.0 302 82.1
ClCG11G018320 Citrullus lanatus HOM05D004029 ORTHO05D004613 1.6e-145 519.6 302 84.1
A10p11660 Brassica napus HOM05D004029 ORTHO05D004613 2.2e-145 519.2 302 81.8
Os12g0554400 Oryza sativa ssp. japonica HOM05D004029 ORTHO05D004613 2.4e-144 515.8 306 78.4
Nitab4.5_0000815g0060 Nicotiana tabacum HOM05D004029 ORTHO05D004613 2.2e-142 509.2 286 84.6
Nitab4.5_0001204g0130 Nicotiana tabacum HOM05D004029 ORTHO05D004613 5.0e-142 508.1 286 84.3
Zm00001eb137170 Zea mays HOM05D004029 ORTHO05D004613 5.0e-142 508.1 306 78.4
Lsat_1_v5_gn_7_105721 Lactuca sativa HOM05D004029 ORTHO05D004613 4.6e-140 501.5 300 78.0
SGA_v2.0_scaffold77G25216 Striga asiatica HOM05D004029 ORTHO05D004613 3.0e-139 498.8 369 67.2
Haze_09504 Corylus avellana HOM05D004029 ORTHO05D004613 9.7e-138 493.8 300 81.0
HanXRQChr13g0386411 Helianthus annuus HOM05D004029 ORTHO05D004613 2.3e-123 446.0 306 69.3
Ciclev10007273m.g Citrus clementina HOM05D004029 ORTHO05D004613 1.7e-121 439.9 306 70.3
Psat4g074000 Pisum sativum HOM05D004029 ORTHO05D004613 8.0e-116 421.0 266 76.3
Mapoly0031s0138 Marchantia polymorpha HOM05D004029 ORTHO05D004613 2.4e-112 409.5 301 64.8
ECA236G3046 Erigeron canadensis HOM05D004029 ORTHO05D004613 4.5e-111 405.2 286 67.8
SHI21494 Sapria himalayana HOM05D004029 ORTHO05D004613 1.8e-107 393.3 290 65.5
Rhsim06G0194500 Rhododendron simsii HOM05D004029 ORTHO05D004613 1.2e-103 380.6 205 88.3
VMungo1080G0798 Vigna mungo HOM05D004029 ORTHO05D004613 1.0e-102 377.5 209 84.7
Pp3c26_12060 Physcomitrium patens HOM05D004029 ORTHO05D004613 2.7e-95 352.8 292 59.9
HPP92_020359 Vanilla planifolia HOM05D004029 ORTHO05D004613 5.6e-93 345.1 194 83.0
AagrBONN_evm.TU.Sc2ySwM_344.2130 Anthoceros agrestis HOM05D004029 ORTHO05D004613 5.8e-90 335.1 299 53.5
Atru.chr2.2810 Acer truncatum HOM05D004029 ORTHO05D004613 5.6e-85 318.5 172 86.6
Dinv08326 Davidia involucrata HOM05D004029 ORTHO05D004613 4.1e-80 302.4 159 92.5
unitig_0.g2259 Utricularia gibba HOM05D004029 ORTHO05D004613 9.2e-80 301.2 250 63.6
Pp3c3_4080 Physcomitrium patens HOM05D004029 ORTHO05D004613 1.3e-73 280.8 280 51.8
Atru.chr2.2808 Acer truncatum HOM05D004029 ORTHO05D004613 4.9e-73 278.9 152 86.2
Oeu008022.1 Olea europaea HOM05D004029 ORTHO05D004613 3.3e-61 239.6 142 76.8
Dinv08327 Davidia involucrata HOM05D004029 ORTHO05D004613 7.6e-58 228.4 119 89.1
Dinv22372 Davidia involucrata HOM05D004029 ORTHO05D004613 4.5e-42 176.0 111 76.6
Gohir.A11G282734 Gossypium hirsutum HOM05D004029 ORTHO05D004613 2.2e-41 173.7 99 80.8
HPP92_027774 Vanilla planifolia HOM05D004029 ORTHO05D004613 1.6e-39 167.5 98 80.6
Psat7g242400 Pisum sativum HOM05D004029 ORTHO05D004613 4.6e-39 166.0 102 80.4
Gohir.D11G296250 Gossypium hirsutum HOM05D004029 ORTHO05D004613 5.9e-34 149.1 81 80.2
Atru.chr2.2811 Acer truncatum HOM05D004029 ORTHO05D004613 3.6e-31 139.8 81 80.2
HPP92_027773 Vanilla planifolia HOM05D004029 ORTHO05D004613 3.6e-31 139.8 86 77.9
SEGI_16455 Sequoiadendron giganteum HOM05D004029 ORTHO05D004613 4.6e-31 139.4 78 79.5
AL8G29790 Arabidopsis lyrata HOM05D004029 ORTHO05D004613 5.1e-30 136.0 73 86.3
Medtr4g126280 Medicago truncatula HOM05D004029 ORTHO05D004613 7.7e-26 122.1 65 84.6
CBR_g48013 Chara braunii HOM05D004029 ORTHO05D004613 1.3e-20 104.8 107 46.7
SEGI_17451 Sequoiadendron giganteum HOM05D004029 ORTHO05D004613 1.3e-20 104.8 62 79.0
Lsat_1_v5_gn_8_148540 Lactuca sativa HOM05D004029 ORTHO05D004613 1.2e-18 98.2 81 63.0
Cpa.g.sc80.100 Carica papaya HOM05D004029 ORTHO05D004613 2.9e-17 93.6 54 77.8
Lsat_1_v5_gn_4_161921 Lactuca sativa HOM05D004029 ORTHO05D004613 1.6e-15 87.8 99 50.5
CBR_g48014 Chara braunii HOM05D004029 ORTHO05D004613 4.7e-15 86.3 94 51.1
Gohir.D11G296200 Gossypium hirsutum HOM05D004029 ORTHO05D004613 7.9e-15 85.5 54 72.2
Cfa025671 Carpinus fangiana HOM05D004029 ORTHO05D004613 1.7e-12 77.8 267 25.5
SEGI_37124 Sequoiadendron giganteum HOM05D004029 ORTHO05D004613 1.2e-10 71.6 45 71.1
Cre01.g003500 Chlamydomonas reinhardtii HOM05D004029 ORTHO05D004613 1.0e-09 68.6 107 34.6
MBI16_g04070_MAGBIO Magnolia biondii HOM05D005084 ORTHO05D006254 5.5e-08 62.8 52 61.5


User provided reference genes

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