Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G0298 Trochodendron aralioides HOM05D000184 ORTHO05D000032 1.5e-127 459.5 237 100.0
TAR627G0382 Trochodendron aralioides HOM05D000184 ORTHO05D000032 1.5e-127 459.5 237 100.0
TAR365G0168 Trochodendron aralioides HOM05D000184 ORTHO05D000032 4.1e-88 328.6 246 77.2
TAR627G0396 Trochodendron aralioides HOM05D000184 ORTHO05D000032 6.3e-81 304.7 161 98.8
TAR365G1155 Trochodendron aralioides HOM05D000184 ORTHO05D000032 1.7e-70 270.0 143 98.6
TAR362G1113 Trochodendron aralioides HOM05D000184 ORTHO05D000032 4.1e-56 222.2 257 56.0
Nn3g19969 Nelumbo nucifera HOM05D000184 ORTHO05D000032 5.4e-56 221.9 257 56.0
TAR457G0001 Trochodendron aralioides HOM05D000184 ORTHO05D000032 8.0e-52 208.0 109 99.1
TAR633G1219 Trochodendron aralioides HOM05D000184 ORTHO05D000032 1.0e-51 207.6 252 56.3
Nn1g07862 Nelumbo nucifera HOM05D000184 ORTHO05D000032 1.8e-51 206.8 257 54.9
Potri.001G314800 Populus trichocarpa HOM05D000184 ORTHO05D000032 1.6e-47 193.7 252 51.2
Potri.017G054800 Populus trichocarpa HOM05D000184 ORTHO05D000032 1.3e-46 190.7 255 51.0
QL06p024540 Quercus lobata HOM05D000184 ORTHO05D000032 1.3e-46 190.7 251 52.2
Atru.chr4.1708 Acer truncatum HOM05D000184 ORTHO05D000032 2.3e-46 189.9 254 50.0
Cfa014918 Carpinus fangiana HOM05D000184 ORTHO05D000032 2.3e-46 189.9 255 51.4
Ciclev10005596m.g Citrus clementina HOM05D000184 ORTHO05D000032 2.3e-46 189.9 254 49.6
Prupe.1G007000 Prunus persica HOM05D000184 ORTHO05D000032 3.9e-46 189.1 251 50.6
TAR636G2150 Trochodendron aralioides HOM05D000184 ORTHO05D000032 6.6e-46 188.3 240 56.2
Sabra16G0199200 Salix brachista HOM05D002843 ORTHO05D003086 1.1e-45 187.6 252 50.0
Manes.03G148100 Manihot esculenta HOM05D000184 ORTHO05D000032 3.3e-45 186.0 259 49.4
Sabra17G0048700 Salix brachista HOM05D000184 ORTHO05D000032 1.2e-44 184.1 255 49.8
TWI73G0641 Tripterygium wilfordii HOM05D000184 ORTHO05D000032 2.1e-44 183.3 269 45.7
TWI53G1571 Tripterygium wilfordii HOM05D000184 ORTHO05D000032 4.7e-44 182.2 253 48.2
CiPaw.01G121700 Carya illinoinensis HOM05D000184 ORTHO05D000032 8.0e-44 181.4 251 48.6
MD04G1008300 Malus domestica HOM05D000184 ORTHO05D000032 1.2e-42 177.6 254 48.0
Aqoxy2G03875 Aquilegia oxysepala HOM05D000184 ORTHO05D000032 1.5e-42 177.2 253 51.0
Haze_11607 Corylus avellana HOM05D002843 ORTHO05D003086 2.6e-42 176.4 240 52.1
CiPaw.02G066500 Carya illinoinensis HOM05D000184 ORTHO05D000032 3.4e-42 176.0 251 48.6
RcHm_v2.0_Chr4g0415391 Rosa chinensis HOM05D000184 ORTHO05D000032 3.7e-41 172.6 251 49.8
Duzib151G0674 Durio zibethinus HOM05D000184 ORTHO05D000032 8.3e-41 171.4 251 47.0
Duzib212G0863 Durio zibethinus HOM05D000184 ORTHO05D000032 1.4e-40 170.6 254 46.5
FvH4_4g15780 Fragaria vesca HOM05D000184 ORTHO05D000032 1.9e-40 170.2 248 48.0
FAN12G2351 Fragaria x ananassa HOM05D000184 ORTHO05D000032 1.9e-40 170.2 248 48.0
FAN17G2338 Fragaria x ananassa HOM05D000184 ORTHO05D000032 3.2e-40 169.5 248 47.6
Gorai.005G033900 Gossypium raimondii HOM05D000184 ORTHO05D000032 3.2e-40 169.5 251 47.4
Thecc.04G204700 Theobroma cacao HOM05D000184 ORTHO05D000032 3.2e-40 169.5 247 46.6
FAN22G2178 Fragaria x ananassa HOM05D000184 ORTHO05D000032 4.1e-40 169.1 248 48.0
Dinv29592 Davidia involucrata HOM05D000184 ORTHO05D000032 7.0e-40 168.3 253 47.8
FAN07G1513 Fragaria x ananassa HOM05D000184 ORTHO05D000032 2.7e-39 166.4 248 48.4
Actinidia33190 Actinidia chinensis HOM05D000184 ORTHO05D000032 1.3e-38 164.1 250 46.8
Manes.15G053300 Manihot esculenta HOM05D000184 ORTHO05D000032 3.9e-38 162.5 255 46.7
TWI09G0493 Tripterygium wilfordii HOM05D000184 ORTHO05D000032 3.9e-38 162.5 248 46.0
Cc03_g07780 Coffea canephora HOM05D000184 ORTHO05D000032 1.5e-37 160.6 254 46.1
Gohir.D10G142200 Gossypium hirsutum HOM05D000184 ORTHO05D000032 1.5e-37 160.6 247 44.9
Gorai.011G158500 Gossypium raimondii HOM05D000184 ORTHO05D000032 1.5e-37 160.6 247 44.9
Duzib268G0945 Durio zibethinus HOM05D000184 ORTHO05D000032 3.6e-36 156.0 254 45.3
Actinidia35867 Actinidia chinensis HOM05D000184 ORTHO05D000032 6.2e-36 155.2 255 46.7
Gohir.D02G030600 Gossypium hirsutum HOM05D000184 ORTHO05D000032 1.8e-35 153.7 253 44.7
Duzib268G0666 Durio zibethinus HOM05D000184 ORTHO05D000032 2.3e-35 153.3 235 48.1
Gohir.A02G023300 Gossypium hirsutum HOM05D000184 ORTHO05D000032 4.4e-34 149.1 253 44.3
Lj3C414T2 Lonicera japonica HOM05D000184 ORTHO05D000032 4.4e-34 149.1 234 47.9
DCAR_024477 Daucus carota HOM05D000184 ORTHO05D000032 5.8e-34 148.7 258 43.4
vmacro00477 Vaccinium macrocarpon HOM05D000184 ORTHO05D000032 1.3e-33 147.5 247 44.9
MELO3C006313.2 Cucumis melo HOM05D000184 ORTHO05D000032 8.3e-33 144.8 203 50.7
Sc13g0000140 Simmondsia chinensis HOM05D000184 ORTHO05D000032 8.3e-33 144.8 254 42.9
Eucgr.H00055 Eucalyptus grandis HOM05D000184 ORTHO05D000032 1.4e-32 144.1 249 41.0
Rhsim09G0055800 Rhododendron simsii HOM05D000184 ORTHO05D000032 1.9e-32 143.7 272 39.7
Hma1.2p1_0187F.1_g082110 Hydrangea macrophylla HOM05D000184 ORTHO05D000032 3.2e-32 142.9 254 42.9
MBI11_g04266_MAGBIO Magnolia biondii HOM05D000184 ORTHO05D000032 7.1e-32 141.7 255 43.5
Hma1.2p1_1382F.1_g279430 Hydrangea macrophylla HOM05D000184 ORTHO05D000032 3.5e-31 139.4 249 43.4
MSTRG.9818 Avicennia marina HOM05D000184 ORTHO05D000032 1.0e-30 137.9 253 41.1
CSS0023963 Camellia sinensis var. sinensis HOM05D000184 ORTHO05D000032 5.1e-30 135.6 232 41.8
CANSAT78G0410 Cannabis sativa HOM05D000184 ORTHO05D000032 5.1e-30 135.6 245 42.4
Sed0003960 Sechium edule HOM05D000184 ORTHO05D000032 7.3e-29 131.7 251 40.2
SalBow8G0958 Salvia bowleyana HOM05D000184 ORTHO05D000032 3.1e-27 126.3 251 39.0
A08p06780 Brassica napus HOM05D000184 ORTHO05D000032 4.0e-27 125.9 247 41.7
BraA08t32696Z Brassica rapa HOM05D000184 ORTHO05D000032 4.0e-27 125.9 247 41.7
THA.LOC104808715 Tarenaya hassleriana HOM05D000184 ORTHO05D000032 4.0e-27 125.9 254 41.3
Lsat_1_v5_gn_6_60361 Lactuca sativa HOM05D000184 ORTHO05D000032 5.2e-27 125.6 240 44.2
DCAR_030793 Daucus carota HOM05D000184 ORTHO05D000032 8.9e-27 124.8 256 40.6
Actinidia11413 Actinidia chinensis HOM05D000184 ORTHO05D000032 3.4e-26 122.9 251 39.8
COL.COLO4_09880 Corchorus olitorius HOM05D000184 ORTHO05D000032 3.4e-26 122.9 158 53.2
Gohir.A10G124000 Gossypium hirsutum HOM05D000184 ORTHO05D000032 3.4e-26 122.9 178 47.2
ATR1145G045 Amborella trichopoda HOM05D000184 ORTHO05D000032 4.4e-26 122.5 242 40.5
Migut.G00679 Erythranthe guttata HOM05D000184 ORTHO05D000032 4.4e-26 122.5 254 41.3
HanXRQChr01g0022251 Helianthus annuus HOM05D000184 ORTHO05D000032 7.6e-26 121.7 228 42.1
BolC8t47639H Brassica oleracea HOM05D000184 ORTHO05D000032 1.7e-25 120.6 249 39.8
ClCG05G003320 Citrullus lanatus HOM05D000184 ORTHO05D000032 2.9e-25 119.8 251 39.8
Nitab4.5_0000898g0010 Nicotiana tabacum HOM05D000184 ORTHO05D000032 3.7e-25 119.4 246 40.2
ECA233G3792 Erigeron canadensis HOM05D000184 ORTHO05D000032 4.9e-25 119.0 231 43.7
PSO170G4726 Papaver somniferum HOM05D000184 ORTHO05D000032 4.9e-25 119.0 250 42.4
PSO357G0670 Papaver somniferum HOM05D000184 ORTHO05D000032 8.3e-25 118.2 252 42.5
DCAR_026609 Daucus carota HOM05D000184 ORTHO05D000032 1.1e-24 117.9 220 42.7
Oeu016735.1 Olea europaea HOM05D000184 ORTHO05D000032 1.9e-24 117.1 254 38.6
AT4G13640 Arabidopsis thaliana HOM05D000184 ORTHO05D000032 3.2e-24 116.3 251 40.6
Gohir.A09G205100 Gossypium hirsutum HOM05D000184 ORTHO05D000032 4.1e-24 115.9 190 43.7
BcaB04g17663 Brassica carinata HOM05D000184 ORTHO05D000032 9.2e-24 114.8 246 39.4
Oeu018218.3 Olea europaea HOM05D000184 ORTHO05D000032 1.6e-23 114.0 268 38.4
AL3G39150 Arabidopsis lyrata HOM05D000184 ORTHO05D000032 2.1e-23 113.6 252 40.5
CAN.G1635.16 Capsicum annuum HOM05D000184 ORTHO05D000032 2.7e-23 113.2 244 38.5
Aa31LG8G10760 Aethionema arabicum HOM05D000184 ORTHO05D000032 3.5e-23 112.8 250 40.4
Peaxi162Scf00047g00522 Petunia axillaris HOM05D000184 ORTHO05D000032 6.0e-23 112.1 243 39.9
PGSC0003DMG400004567 Solanum tuberosum HOM05D000184 ORTHO05D000032 6.0e-23 112.1 192 44.8
CsaV3_3G010950 Cucumis sativus L. HOM05D000184 ORTHO05D000032 7.8e-23 111.7 179 47.5
Gorai.006G222400 Gossypium raimondii HOM05D000184 ORTHO05D000032 7.8e-23 111.7 185 43.8
AL7G42910 Arabidopsis lyrata HOM05D000184 ORTHO05D000032 1.3e-22 110.9 251 40.2
Lj6A558G54 Lonicera japonica HOM05D000184 ORTHO05D000032 1.3e-22 110.9 205 44.9
Nitab4.5_0000676g0220 Nicotiana tabacum HOM05D000184 ORTHO05D000032 1.3e-22 110.9 229 41.9
Nitab4.5_0001416g0010 Nicotiana tabacum HOM05D000184 ORTHO05D000032 2.3e-22 110.2 246 38.6
CARHR219350 Cardamine hirsuta HOM05D000184 ORTHO05D000032 1.1e-21 107.8 245 38.8
Aa31LG9G4000 Aethionema arabicum HOM05D000184 ORTHO05D000032 1.9e-21 107.1 256 37.5
PGSC0003DMG400031299 Solanum tuberosum HOM05D000184 ORTHO05D000032 2.5e-21 106.7 247 38.1
THA.LOC104821612 Tarenaya hassleriana HOM05D000184 ORTHO05D000032 2.5e-21 106.7 252 40.5
Nn1g01042 Nelumbo nucifera HOM05D000184 ORTHO05D000032 5.6e-21 105.5 199 40.2
Lsat_1_v5_gn_1_72761 Lactuca sativa HOM05D000184 ORTHO05D000032 9.6e-21 104.8 225 40.0
Sp3g21820 Schrenkiella parvula HOM05D000184 ORTHO05D000032 9.6e-21 104.8 227 41.0
Oeu015950.1 Olea europaea HOM05D000184 ORTHO05D000032 1.2e-20 104.4 242 38.8
GSVIVG01021072001 Vitis vinifera HOM05D000184 ORTHO05D000032 1.2e-20 104.4 171 46.8
BcaC07g37345 Brassica carinata HOM05D000184 ORTHO05D000032 2.1e-20 103.6 246 37.4
Thhalv10002625m.g Eutrema salsugineum HOM05D000184 ORTHO05D000032 2.1e-20 103.6 252 38.5
Solyc12g098370.2 Solanum lycopersicum HOM05D000184 ORTHO05D000032 2.1e-20 103.6 192 40.1
HanXRQChr02g0058891 Helianthus annuus HOM05D000184 ORTHO05D000032 2.8e-20 103.2 226 39.4
Carub.0007s2889 Capsella rubella HOM05D000184 ORTHO05D000032 3.6e-20 102.8 235 40.9
C01p39580 Brassica napus HOM05D002843 ORTHO05D003086 4.7e-20 102.4 254 39.0
A01p31060 Brassica napus HOM05D002843 ORTHO05D003086 6.2e-20 102.1 227 41.0
Solyc09g091880.4 Solanum lycopersicum HOM05D000184 ORTHO05D000032 6.2e-20 102.1 244 36.9
Carub.0003s2438 Capsella rubella HOM05D000184 ORTHO05D000032 8.1e-20 101.7 252 38.1
CARHR100080 Cardamine hirsuta HOM05D000184 ORTHO05D000032 8.1e-20 101.7 227 40.1
BolC1t03907H Brassica oleracea HOM05D002843 ORTHO05D003086 4.0e-19 99.4 227 40.5
Sopen09g034770 Solanum pennellii HOM05D000184 ORTHO05D000032 6.8e-19 98.6 245 37.1
BolC3t17597H Brassica oleracea HOM05D000184 ORTHO05D000032 1.2e-18 97.8 228 39.9
BcaB04g20401 Brassica carinata HOM05D000184 ORTHO05D000032 1.5e-18 97.4 225 40.4
ECA248G1259 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.5e-18 97.4 195 39.5
Sp7g11350 Schrenkiella parvula HOM05D000184 ORTHO05D000032 1.5e-18 97.4 249 36.1
AT3G24120 Arabidopsis thaliana HOM05D000184 ORTHO05D000032 2.0e-18 97.1 249 38.6
Thhalv10025876m.g Eutrema salsugineum HOM05D000184 ORTHO05D000032 2.0e-18 97.1 234 37.2
BcaC01g03356 Brassica carinata HOM05D000184 ORTHO05D000032 3.4e-18 96.3 242 38.0
CAN.G767.40 Capsicum annuum HOM05D000184 ORTHO05D000032 3.4e-18 96.3 245 35.5
Gohir.D09G198800 Gossypium hirsutum HOM05D000184 ORTHO05D000032 3.4e-18 96.3 133 48.9
Sopen12g033150 Solanum pennellii HOM05D000184 ORTHO05D000032 3.4e-18 96.3 188 38.8
Nitab4.5_0000850g0070 Nicotiana tabacum HOM05D000184 ORTHO05D000032 5.8e-18 95.5 188 42.6
SEGI_24367 Sequoiadendron giganteum HOM05D000184 ORTHO05D000032 1.3e-17 94.4 245 34.3
BcaB06g26587 Brassica carinata HOM05D000184 ORTHO05D000032 3.8e-17 92.8 239 38.5
PGR142G2963 Punica granatum HOM05D000184 ORTHO05D000032 8.4e-17 91.7 248 34.3
BcaB03g14605 Brassica carinata HOM05D000184 ORTHO05D000032 1.1e-16 91.3 255 36.5
Oeu045307.1 Olea europaea HOM05D000184 ORTHO05D000032 3.2e-16 89.7 242 37.2
Rhsim02G0057000 Rhododendron simsii HOM05D000184 ORTHO05D000032 9.3e-16 88.2 182 39.0
BcaC06g35621 Brassica carinata HOM05D000184 ORTHO05D000032 2.7e-15 86.7 239 37.7
C07p12860 Brassica napus HOM05D002843 ORTHO05D003086 2.7e-15 86.7 239 37.7
BraA03t13481Z Brassica rapa HOM05D000184 ORTHO05D000032 3.5e-15 86.3 242 37.2
A03p43430 Brassica napus HOM05D000184 ORTHO05D000032 4.6e-15 85.9 242 37.2
Oeu022106.1 Olea europaea HOM05D000184 ORTHO05D000032 6.0e-15 85.5 143 43.4
C03p53380 Brassica napus HOM05D000184 ORTHO05D000032 1.3e-14 84.3 228 37.7
vmacro15527 Vaccinium macrocarpon HOM05D000184 ORTHO05D000032 3.9e-14 82.8 182 37.9
Peaxi162Scf00652g00422 Petunia axillaris HOM05D000184 ORTHO05D000032 5.1e-14 82.4 130 46.2
C08p07880 Brassica napus HOM05D000184 ORTHO05D000032 1.9e-13 80.5 246 32.5
BolC7t41771H Brassica oleracea HOM05D002843 ORTHO05D003086 2.4e-11 73.6 233 34.3
BraA01t03231Z Brassica rapa HOM05D002843 ORTHO05D003086 3.1e-11 73.2 131 45.8
SGA_v2.0_scaffold57G20106 Striga asiatica HOM05D000184 ORTHO05D000032 5.8e-10 68.9 227 35.2
Sc13g0002730 Simmondsia chinensis HOM05D000184 ORTHO05D000032 7.6e-10 68.6 188 33.5
A07p08290 Brassica napus HOM05D002843 ORTHO05D003086 4.9e-09 65.9 122 45.1
Duzib177G0153 Durio zibethinus HOM05D000184 ORTHO05D000032 2.4e-08 63.5 72 52.8
FAN23G2232 Fragaria x ananassa HOM05D000184 ORTHO05D000032 3.2e-08 63.2 58 62.1
FAN26G2253 Fragaria x ananassa HOM05D000184 ORTHO05D000032 3.2e-08 63.2 58 62.1
MBI19_g09313_MAGBIO Magnolia biondii HOM05D000184 ORTHO05D000032 3.2e-08 63.2 128 37.5
ATR0751G189 Amborella trichopoda HOM05D000184 ORTHO05D000032 5.4e-08 62.4 236 28.8
TAR636G0798 Trochodendron aralioides HOM05D000059 ORTHO05D000528 9.3e-08 61.6 35 80.0
GSVIVG01033381001 Vitis vinifera HOM05D000184 ORTHO05D000032 1.2e-07 61.2 58 60.3
EL10Ac3g06975 Beta vulgaris HOM05D000184 ORTHO05D000032 4.6e-07 59.3 83 48.2
Nitab4.5_0001933g0010 Nicotiana tabacum HOM05D000184 ORTHO05D000032 4.6e-07 59.3 59 55.9
AUR62025961 Chenopodium quinoa HOM05D000184 ORTHO05D000032 6.0e-07 58.9 98 43.9
AUR62024357 Chenopodium quinoa HOM05D000184 ORTHO05D000032 7.9e-07 58.5 98 43.9
Lj3g0024590 Lotus japonicus HOM05D000184 ORTHO05D000032 7.9e-07 58.5 126 38.9
Lalb_Chr20g0108411 Lupinus albus HOM05D000184 ORTHO05D000032 7.9e-07 58.5 126 38.9
Lalb_Chr25g0284331 Lupinus albus HOM05D000184 ORTHO05D000032 7.9e-07 58.5 126 38.9
Phvul.005G047600 Phaseolus vulgaris HOM05D000184 ORTHO05D000032 7.9e-07 58.5 126 38.9
VMungo1080G1552 Vigna mungo HOM05D000184 ORTHO05D000032 7.9e-07 58.5 126 38.9
Ca_03181_v3 Cicer arietinum L. HOM05D000184 ORTHO05D000032 1.0e-06 58.2 118 39.8
Glyma.02G070900 Glycine max HOM05D000184 ORTHO05D000032 1.0e-06 58.2 59 55.9
MBI14_g12727_MAGBIO Magnolia biondii HOM05D000184 ORTHO05D000032 1.0e-06 58.2 256 28.9
Medtr6g444980 Medicago truncatula HOM05D000184 ORTHO05D000032 1.0e-06 58.2 118 39.8
Ca_02461_v3 Cicer arietinum L. HOM05D000184 ORTHO05D000032 1.3e-06 57.8 118 39.8
Glyma.12G089100 Glycine max HOM05D000184 ORTHO05D000032 1.7e-06 57.4 192 32.3
Psat4g146200 Pisum sativum HOM05D000184 ORTHO05D000032 1.7e-06 57.4 118 39.8
TPR.G7027 Trifolium pratense HOM05D000184 ORTHO05D000032 1.7e-06 57.4 126 38.1
TAR626G1612 Trochodendron aralioides HOM05D000184 ORTHO05D000032 1.7e-06 57.4 126 38.9
Gohir.D08G230600 Gossypium hirsutum HOM05D000184 ORTHO05D000032 2.3e-06 57.0 161 34.8
CARHR194820 Cardamine hirsuta HOM05D000184 ORTHO05D000032 3.9e-06 56.2 95 41.1
HanXRQChr03g0090381 Helianthus annuus HOM05D000184 ORTHO05D000032 3.9e-06 56.2 110 40.0
Sed0020367 Sechium edule HOM05D000184 ORTHO05D000032 5.1e-06 55.8 103 42.7
Solyc10g083340.3 Solanum lycopersicum HOM05D000184 ORTHO05D000032 6.6e-06 55.5 107 39.3
AT5G18240 Arabidopsis thaliana HOM05D000184 ORTHO05D000032 8.7e-06 55.1 56 60.7
Nitab4.5_0003610g0020 Nicotiana tabacum HOM05D000184 ORTHO05D000032 8.7e-06 55.1 94 44.7
TPR.G9394 Trifolium pratense HOM05D000184 ORTHO05D000032 8.7e-06 55.1 118 38.1


User provided reference genes

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