Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 5.4e-90 334.3 172 100.0
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 2.2e-35 152.9 133 68.4
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 8.4e-35 151.0 126 65.1
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 2.5e-34 149.4 126 64.3
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 6.0e-33 144.8 124 66.9
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 1.5e-31 140.2 129 62.8
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 4.3e-31 138.7 132 65.9
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 5.7e-31 138.3 128 61.7
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 4.8e-30 135.2 124 62.1
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 4.8e-30 135.2 129 61.2
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 6.3e-30 134.8 134 59.7
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 3.1e-29 132.5 128 62.5
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 9.0e-29 131.0 128 63.3
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 2.6e-28 129.4 130 60.0
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 4.5e-28 128.6 129 56.6
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 4.5e-28 128.6 124 63.7
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 5.9e-28 128.3 133 58.6
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 7.6e-28 127.9 129 57.4
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 7.6e-28 127.9 129 58.1
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 7.6e-28 127.9 129 60.5
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 1.3e-27 127.1 124 62.1
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.3e-27 127.1 124 62.1
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 2.9e-27 125.9 130 60.0
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 2.9e-27 125.9 129 58.9
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 2.9e-27 125.9 130 61.5
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 5.0e-27 125.2 124 59.7
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 5.0e-27 125.2 128 59.4
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 6.5e-27 124.8 124 62.1
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 6.5e-27 124.8 122 59.0
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 8.5e-27 124.4 131 56.5
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 8.5e-27 124.4 133 59.4
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 8.5e-27 124.4 131 58.8
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 1.4e-26 123.6 128 56.2
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.9e-26 123.2 124 61.3
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 3.2e-26 122.5 131 55.7
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 3.2e-26 122.5 128 57.0
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 4.2e-26 122.1 131 61.1
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 4.2e-26 122.1 131 61.1
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 4.2e-26 122.1 130 55.4
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 5.5e-26 121.7 145 51.7
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 5.5e-26 121.7 129 56.6
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 7.2e-26 121.3 131 58.0
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 1.2e-25 120.6 129 54.3
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 2.1e-25 119.8 129 54.3
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.1e-25 119.8 124 60.5
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 2.1e-25 119.8 128 55.5
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 2.1e-25 119.8 130 57.7
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 2.7e-25 119.4 125 64.0
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 2.7e-25 119.4 130 56.2
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 4.6e-25 118.6 129 55.8
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 1.3e-24 117.1 132 56.8
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 1.3e-24 117.1 130 54.6
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 1.3e-24 117.1 139 57.6
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 1.8e-24 116.7 133 58.6
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 1.8e-24 116.7 130 55.4
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 3.0e-24 115.9 129 55.0
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 5.1e-24 115.2 130 54.6
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 8.7e-24 114.4 130 53.1
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 8.7e-24 114.4 129 57.4
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 1.9e-23 113.2 128 57.0
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 9.7e-23 110.9 125 56.8
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 2.8e-22 109.4 133 47.4
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 2.8e-22 109.4 127 55.9
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 4.8e-22 108.6 134 54.5
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 6.3e-22 108.2 126 57.9
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 6.3e-22 108.2 131 51.9
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 8.2e-22 107.8 134 52.2
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 1.4e-21 107.1 131 53.4
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 3.1e-21 105.9 128 54.7
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 4.1e-21 105.5 131 55.0
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 6.9e-21 104.8 133 50.4
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 6.9e-21 104.8 132 53.0
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 9.1e-21 104.4 125 55.2
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 1.5e-20 103.6 85 63.5
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 2.0e-20 103.2 139 51.1
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 2.0e-20 103.2 128 52.3
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 2.6e-20 102.8 132 54.5
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 3.4e-20 102.4 79 67.1
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 7.7e-20 101.3 131 51.1
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 1.0e-19 100.9 125 52.8
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 8.5e-19 97.8 131 51.1
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 1.1e-18 97.4 133 51.1
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 1.9e-18 96.7 122 52.5
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.9e-18 96.7 130 50.0
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 2.5e-18 96.3 67 71.6
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 3.2e-18 95.9 141 50.4
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 3.2e-18 95.9 104 55.8
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 4.2e-18 95.5 135 48.9
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 4.2e-18 95.5 125 50.4
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 5.5e-18 95.1 128 47.7
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 7.2e-18 94.7 128 47.7
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 7.2e-18 94.7 89 58.4
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 9.4e-18 94.4 88 59.1
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 9.4e-18 94.4 130 49.2
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 1.2e-17 94.0 135 49.6
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 1.6e-17 93.6 132 46.2
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 2.1e-17 93.2 88 58.0
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 2.1e-17 93.2 66 71.2
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 2.1e-17 93.2 132 43.9
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 4.7e-17 92.0 88 56.8
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 7.9e-17 91.3 88 56.8
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 1.4e-16 90.5 132 47.7
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 1.8e-16 90.1 129 48.8
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 3.0e-16 89.4 131 48.1
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 3.0e-16 89.4 131 48.1
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 3.0e-16 89.4 131 47.3
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 3.9e-16 89.0 74 60.8
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 1.5e-15 87.0 133 43.6
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 1.5e-15 87.0 133 43.6
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 2.0e-15 86.7 133 43.6
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 2.0e-15 86.7 91 57.1
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 3.3e-15 85.9 131 45.8
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 5.7e-15 85.1 122 44.3
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 1.3e-14 84.0 58 69.0
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 1.7e-14 83.6 56 73.2
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 4.8e-14 82.0 120 46.7
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 8.2e-14 81.3 79 54.4
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 1.1e-13 80.9 126 45.2
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 2.5e-10 69.7 63 58.7
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 3.2e-10 69.3 63 54.0
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 2.1e-09 66.6 91 48.4
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 4.7e-09 65.5 87 44.8
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 3.0e-08 62.8 68 50.0
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 3.9e-08 62.4 79 44.3
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 4.8e-06 55.5 38 65.8


User provided reference genes

Program Settings