Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0216 Trochodendron aralioides HOM05D001687 ORTHO05D001608 2.7e-83 312.0 162 100.0
TAR626G1266 Trochodendron aralioides HOM05D001687 ORTHO05D001608 1.2e-27 127.1 130 56.2
Nn1g06620 Nelumbo nucifera HOM05D001687 ORTHO05D001608 9.7e-25 117.5 149 51.0
Nn1g04007 Nelumbo nucifera HOM05D001687 ORTHO05D001608 4.4e-17 92.0 103 56.3
PSO675G3603 Papaver somniferum HOM05D001687 ORTHO05D001608 2.2e-16 89.7 111 51.4
QL05p039326 Quercus lobata HOM05D001687 ORTHO05D001608 2.4e-15 86.3 144 40.3
QL10p057203 Quercus lobata HOM05D001687 ORTHO05D001608 4.1e-15 85.5 144 40.3
Aqoxy1G02572 Aquilegia oxysepala HOM05D001687 ORTHO05D001608 5.4e-15 85.1 122 45.1
Cpa.g.sc1028.3 Carica papaya HOM05D001687 ORTHO05D001608 1.6e-14 83.6 118 43.2
Dinv07530 Davidia involucrata HOM05D001687 ORTHO05D001608 2.0e-14 83.2 124 43.5
Haze_06508 Corylus avellana HOM05D001687 ORTHO05D001608 4.5e-14 82.0 149 40.3
CSS0001834 Camellia sinensis var. sinensis HOM05D001687 ORTHO05D001608 7.7e-14 81.3 118 46.6
Dinv40533 Davidia involucrata HOM05D002794 ORTHO05D001608 1.3e-13 80.5 121 45.5
CiPaw.09G056500 Carya illinoinensis HOM05D001687 ORTHO05D001608 1.7e-13 80.1 137 39.4
TWI38G0660 Tripterygium wilfordii HOM05D001687 ORTHO05D001608 8.5e-13 77.8 112 46.4
Cfa000408 Carpinus fangiana HOM05D001687 ORTHO05D001608 3.2e-12 75.9 148 37.2
Duzib235G0687 Durio zibethinus HOM05D001687 ORTHO05D001608 1.0e-10 70.9 112 41.1
Thecc.06G191700 Theobroma cacao HOM05D001687 ORTHO05D001608 1.0e-10 70.9 108 40.7
TWI63G0456 Tripterygium wilfordii HOM05D001687 ORTHO05D001608 1.0e-10 70.9 109 43.1
COL.COLO4_31512 Corchorus olitorius HOM05D001687 ORTHO05D001608 1.2e-09 67.4 108 42.6
Duzib160G0473 Durio zibethinus HOM05D001687 ORTHO05D001608 1.5e-09 67.0 112 39.3
Prupe.4G042800 Prunus persica HOM05D001687 ORTHO05D001608 2.0e-09 66.6 133 36.8
Hma1.2p1_0191F.1_g083100 Hydrangea macrophylla HOM05D001687 ORTHO05D001608 2.6e-09 66.2 140 41.4
CSS0012129 Camellia sinensis var. sinensis HOM05D001687 ORTHO05D001608 3.4e-09 65.9 73 47.9
CSS0038135 Camellia sinensis var. sinensis HOM05D001687 ORTHO05D001608 3.4e-09 65.9 73 47.9
GSVIVG01002627001 Vitis vinifera HOM05D001687 ORTHO05D001608 5.7e-09 65.1 113 41.6
Potri.004G039300 Populus trichocarpa HOM05D001687 ORTHO05D001608 7.5e-09 64.7 107 39.3
Actinidia05610 Actinidia chinensis HOM05D001687 ORTHO05D001608 2.2e-08 63.2 117 44.4
Manes.16G024800 Manihot esculenta HOM05D001687 ORTHO05D001608 2.2e-08 63.2 91 42.9
Potri.011G047700 Populus trichocarpa HOM05D001687 ORTHO05D001608 2.8e-08 62.8 105 39.0
RcHm_v2.0_Chr5g0007781 Rosa chinensis HOM05D001687 ORTHO05D001608 2.8e-08 62.8 134 35.8
Sabra11G0033100 Salix brachista HOM05D001687 ORTHO05D001608 4.9e-08 62.0 105 39.0
MD05G1317900 Malus domestica HOM05D001687 ORTHO05D001608 6.3e-08 61.6 153 33.3
Ciclev10015246m.g Citrus clementina HOM05D001687 ORTHO05D001608 1.8e-07 60.1 119 36.1
Sabra04G0024100 Salix brachista HOM05D001687 ORTHO05D001608 2.4e-07 59.7 105 38.1
DCAR_008050 Daucus carota HOM05D001687 ORTHO05D001608 4.1e-07 58.9 122 35.2
MSTRG.14685 Avicennia marina HOM05D001687 ORTHO05D001608 9.2e-07 57.8 89 39.3
CANSAT35G0025 Cannabis sativa HOM05D001687 ORTHO05D001608 1.6e-06 57.0 160 31.2
Actinidia01899 Actinidia chinensis HOM05D001687 ORTHO05D001608 2.0e-06 56.6 74 45.9
Actinidia07575 Actinidia chinensis HOM05D001687 ORTHO05D001608 2.0e-06 56.6 105 44.8
Gohir.A06G125400 Gossypium hirsutum HOM05D001687 ORTHO05D001608 4.5e-06 55.5 96 38.5
Gohir.D06G130500 Gossypium hirsutum HOM05D001687 ORTHO05D001608 4.5e-06 55.5 96 40.6


User provided reference genes

Program Settings