Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0203 Trochodendron aralioides HOM05D006050 ORTHO05D007457 1.5e-292 1008.8 521 100.0
Nn3g20737 Nelumbo nucifera HOM05D006050 ORTHO05D007457 1.3e-184 650.2 523 67.3
Atru.chr10.1253 Acer truncatum HOM05D006050 ORTHO05D007457 7.1e-178 627.9 521 65.1
Aqoxy4G00089 Aquilegia oxysepala HOM05D006050 ORTHO05D007457 1.3e-176 623.6 492 67.5
PSO017G0250 Papaver somniferum HOM05D006050 ORTHO05D007457 8.2e-174 614.4 520 65.6
MD05G1284800 Malus domestica HOM05D006050 ORTHO05D007457 5.3e-173 611.7 531 65.0
PGR083G2192 Punica granatum HOM05D006050 ORTHO05D007457 2.0e-172 609.8 520 62.7
Thecc.06G151800 Theobroma cacao HOM05D006050 ORTHO05D007457 3.4e-172 609.0 511 64.0
MD10G1263200 Malus domestica HOM05D006050 ORTHO05D007457 2.2e-171 606.3 527 64.7
QL05p058532 Quercus lobata HOM05D006050 ORTHO05D007457 6.5e-171 604.7 517 64.8
FvH4_3g05720 Fragaria vesca HOM05D006050 ORTHO05D007457 1.9e-170 603.2 477 66.7
GSVIVG01021436001 Vitis vinifera HOM05D006050 ORTHO05D007457 1.9e-170 603.2 468 67.3
PSO170G3783 Papaver somniferum HOM05D006050 ORTHO05D007457 2.5e-170 602.8 519 65.3
Dinv30732 Davidia involucrata HOM05D006050 ORTHO05D007457 9.3e-170 600.9 410 73.2
RcHm_v2.0_Chr5g0013951 Rosa chinensis HOM05D006050 ORTHO05D007457 3.9e-168 595.5 529 62.9
Manes.17G069500 Manihot esculenta HOM05D006050 ORTHO05D007457 8.2e-166 587.8 499 62.5
Potri.011G080600 Populus trichocarpa HOM05D006050 ORTHO05D007457 4.1e-165 585.5 512 61.9
CiPaw.09G124900 Carya illinoinensis HOM05D006050 ORTHO05D007457 6.9e-165 584.7 460 67.2
Actinidia19520 Actinidia chinensis HOM05D006050 ORTHO05D007457 1.4e-162 577.0 508 62.2
Sabra11G0069700 Salix brachista HOM05D006050 ORTHO05D007457 9.4e-162 574.3 483 64.2
Gorai.009G155500 Gossypium raimondii HOM05D006050 ORTHO05D007457 1.2e-161 573.9 521 60.5
ClCG03G007090 Citrullus lanatus HOM05D006050 ORTHO05D007457 6.7e-160 568.2 472 63.6
CsaV3_1G032660 Cucumis sativus L. HOM05D006050 ORTHO05D007457 6.7e-160 568.2 470 63.4
Gohir.D05G151500 Gossypium hirsutum HOM05D006050 ORTHO05D007457 1.1e-159 567.4 521 59.9
Eucgr.D00300 Eucalyptus grandis HOM05D006050 ORTHO05D007457 1.5e-159 567.0 498 59.6
Hma1.2p1_0286F.1_g114100 Hydrangea macrophylla HOM05D006050 ORTHO05D007457 2.0e-159 566.6 420 68.6
Solyc02g070560.3 Solanum lycopersicum HOM05D006050 ORTHO05D007457 2.0e-159 566.6 520 60.2
Gohir.A05G149000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 3.3e-159 565.8 521 59.9
Sed0022060 Sechium edule HOM05D006050 ORTHO05D007457 9.7e-159 564.3 460 63.3
Rhsim13G0194500 Rhododendron simsii HOM05D006050 ORTHO05D007457 1.3e-158 563.9 519 62.0
CAN.G650.1 Capsicum annuum HOM05D006050 ORTHO05D007457 6.3e-158 561.6 496 61.7
TWI73G0574 Tripterygium wilfordii HOM05D006050 ORTHO05D007457 6.3e-158 561.6 448 67.6
Oeu052380.1 Olea europaea HOM05D006050 ORTHO05D007457 3.1e-157 559.3 451 67.2
Migut.M00918 Erythranthe guttata HOM05D006050 ORTHO05D007457 6.9e-157 558.1 502 58.6
Lj2C306G12 Lonicera japonica HOM05D006050 ORTHO05D007457 2.6e-156 556.2 532 58.5
Peaxi162Scf00170g00718 Petunia axillaris HOM05D006050 ORTHO05D007457 2.2e-155 553.1 450 64.4
Nitab4.5_0002275g0100 Nicotiana tabacum HOM05D006050 ORTHO05D007457 1.1e-154 550.8 539 57.3
Haze_05583 Corylus avellana HOM05D006050 ORTHO05D007457 2.7e-153 546.2 544 58.6
vmacro04186 Vaccinium macrocarpon HOM05D006050 ORTHO05D007457 6.1e-153 545.0 368 73.9
Nitab4.5_0009607g0030 Nicotiana tabacum HOM05D006050 ORTHO05D007457 2.0e-151 540.0 540 56.1
Sabra11G0067500 Salix brachista HOM05D006050 ORTHO05D007457 7.4e-151 538.1 522 58.4
Cc09_g09460 Coffea canephora HOM05D006050 ORTHO05D007457 2.2e-150 536.6 472 59.7
Glyma.15G094900 Glycine max HOM05D006050 ORTHO05D007457 4.8e-150 535.4 510 59.2
HanXRQChr02g0047351 Helianthus annuus HOM05D006050 ORTHO05D007457 1.2e-148 530.8 521 57.2
FAN21G0460 Fragaria x ananassa HOM05D006050 ORTHO05D007457 2.9e-147 526.2 477 61.8
FAN25G0090 Fragaria x ananassa HOM05D006050 ORTHO05D007457 3.2e-146 522.7 477 61.2
Lj6g0009694 Lotus japonicus HOM05D006050 ORTHO05D007457 3.2e-146 522.7 458 60.0
VMungo0540G2452 Vigna mungo HOM05D006050 ORTHO05D007457 9.4e-146 521.2 491 58.0
Ca_00551_v3 Cicer arietinum L. HOM05D006050 ORTHO05D007457 8.0e-145 518.1 522 56.3
Phvul.006G163900 Phaseolus vulgaris HOM05D006050 ORTHO05D007457 3.0e-144 516.2 519 56.1
Duzib192G0778 Durio zibethinus HOM05D006050 ORTHO05D007457 1.1e-143 514.2 525 56.6
Sc05g0006350 Simmondsia chinensis HOM05D006050 ORTHO05D007457 8.2e-142 508.1 511 56.0
Psat1g190800 Pisum sativum HOM05D006050 ORTHO05D007457 1.1e-141 507.7 459 58.8
Duzib235G1544 Durio zibethinus HOM05D006050 ORTHO05D007457 1.7e-139 500.4 527 55.0
Medtr2g019630 Medicago truncatula HOM05D006050 ORTHO05D007457 8.5e-139 498.0 521 53.7
TPR.G28613 Trifolium pratense HOM05D006050 ORTHO05D007457 1.1e-138 497.7 502 53.8
MELO3C002716.2 Cucumis melo HOM05D006050 ORTHO05D007457 1.5e-138 497.3 425 62.8
Gorai.011G043000 Gossypium raimondii HOM05D006050 ORTHO05D007457 1.6e-137 493.8 382 64.9
Ciclev10017950m.g Citrus clementina HOM05D006050 ORTHO05D007457 3.6e-137 492.7 433 59.6
Sp7g15790 Schrenkiella parvula HOM05D006050 ORTHO05D007457 1.0e-136 491.1 476 57.4
ECA248G2274 Erigeron canadensis HOM05D006050 ORTHO05D007457 2.0e-135 486.9 421 62.0
ATR0044G011 Amborella trichopoda HOM05D006050 ORTHO05D007457 2.6e-135 486.5 410 61.7
arahy.Tifrunner.gnm1.ann1.9VA34X Arachis hypogaea HOM05D006050 ORTHO05D007457 4.1e-133 479.2 507 53.8
Thhalv10025036m.g Eutrema salsugineum HOM05D006050 ORTHO05D007457 4.1e-133 479.2 479 56.2
AT4G18270 Arabidopsis thaliana HOM05D006050 ORTHO05D007457 1.2e-132 477.6 514 53.3
AL7G36120 Arabidopsis lyrata HOM05D006050 ORTHO05D007457 1.0e-131 474.6 470 55.7
arahy.Tifrunner.gnm1.ann1.49YCVY Arachis hypogaea HOM05D006050 ORTHO05D007457 1.0e-131 474.6 517 52.8
Cpa.g.sc166.17 Carica papaya HOM05D006050 ORTHO05D007457 2.2e-131 473.4 338 72.5
DCAR_003921 Daucus carota HOM05D006050 ORTHO05D007457 8.5e-131 471.5 442 60.2
SalBow8G2368 Salvia bowleyana HOM05D006050 ORTHO05D007457 1.9e-130 470.3 414 61.8
THA.LOC104812850 Tarenaya hassleriana HOM05D006050 ORTHO05D007457 1.2e-129 467.6 520 53.1
EL10Ac8g19724 Beta vulgaris HOM05D006050 ORTHO05D007457 2.7e-129 466.5 475 53.3
Lsat_1_v5_gn_1_97741 Lactuca sativa HOM05D006050 ORTHO05D007457 4.7e-129 465.7 418 60.5
Ah.09g232650 Amaranthus hybridus HOM05D006050 ORTHO05D007457 6.1e-129 465.3 518 51.0
HPP92_021321 Vanilla planifolia HOM05D006050 ORTHO05D007457 7.5e-127 458.4 374 61.5
A03p51180 Brassica napus HOM05D006050 ORTHO05D007457 4.8e-126 455.7 486 52.1
BraA03t14200Z Brassica rapa HOM05D006050 ORTHO05D007457 4.1e-125 452.6 486 51.9
BolC7t45462H Brassica oleracea HOM05D006050 ORTHO05D007457 4.5e-124 449.1 453 54.7
C07p49580 Brassica napus HOM05D006050 ORTHO05D007457 7.7e-124 448.4 453 54.7
AagrBONN_evm.TU.Sc2ySwM_228.2617 Anthoceros agrestis HOM05D006050 ORTHO05D007457 2.9e-123 446.4 388 58.2
SGA_v2.0_scaffold1G00164 Striga asiatica HOM05D006050 ORTHO05D007457 2.0e-119 433.7 441 54.2
HPP92_008747 Vanilla planifolia HOM05D006050 ORTHO05D007457 2.0e-119 433.7 395 55.7
SMO239G0146 Selaginella moellendorffii HOM05D006050 ORTHO05D007457 7.0e-117 425.2 326 67.2
FvH4_3g05710 Fragaria vesca HOM05D006050 ORTHO05D007457 7.8e-116 421.8 359 63.0
Aa31LG6G960 Aethionema arabicum HOM05D006050 ORTHO05D007457 4.3e-114 416.0 480 51.0
AUR62027517 Chenopodium quinoa HOM05D006050 ORTHO05D007457 2.8e-113 413.3 578 43.9
Mapoly0001s0010 Marchantia polymorpha HOM05D006050 ORTHO05D007457 3.9e-107 392.9 363 56.7
CBR_g3965 Chara braunii HOM05D006050 ORTHO05D007457 2.6e-95 353.6 376 50.0
SGA_v2.0_scaffold333G48995 Striga asiatica HOM05D001706 ORTHO05D007457 4.4e-87 326.2 486 45.1
MBI10_g02215_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 3.0e-83 313.5 280 60.7
MBI10_g02216_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 2.8e-81 307.0 212 73.6
Prupe.4G079600 Prunus persica HOM05D006050 ORTHO05D007457 1.1e-80 305.1 294 56.1
Glyma.13G217500 Glycine max HOM05D006050 ORTHO05D007457 3.0e-75 287.0 295 52.9
COL.COLO4_31087 Corchorus olitorius HOM05D006050 ORTHO05D007457 3.9e-75 286.6 329 49.5
AUR62030211 Chenopodium quinoa HOM05D006050 ORTHO05D007457 1.3e-73 281.6 344 48.5
Carub.0007s2301 Capsella rubella HOM05D006050 ORTHO05D007457 3.8e-70 270.0 193 71.0
Lalb_Chr18g0055521 Lupinus albus HOM05D006050 ORTHO05D007457 1.1e-69 268.5 264 53.0
Lalb_Chr18g0055531 Lupinus albus HOM05D006050 ORTHO05D007457 3.5e-68 263.5 190 70.0
PGSC0003DMG401021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 2.1e-65 254.2 166 77.1
BcaNung05669 Brassica carinata HOM05D006050 ORTHO05D007457 5.3e-56 223.0 166 68.1
PRCOL_00000982 Prasinoderma coloniale HOM05D006050 ORTHO05D007457 5.3e-56 223.0 324 42.9
Gohir.A10G040000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 6.9e-56 222.6 185 58.9
PGSC0003DMG402021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 6.9e-56 222.6 182 62.1
Gohir.D10G040800 Gossypium hirsutum HOM05D006050 ORTHO05D007457 2.2e-54 217.6 185 58.4
Carub.0007s2300 Capsella rubella HOM05D006050 ORTHO05D007457 1.1e-53 215.3 304 44.4
Zm00001eb120180 Zea mays HOM05D006050 ORTHO05D007457 1.9e-53 214.5 270 43.7
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 6.1e-52 209.5 220 47.3
FAN11G0378 Fragaria x ananassa HOM05D006050 ORTHO05D007457 3.3e-50 203.8 144 70.8
SEGI_21633 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 2.4e-48 197.6 152 63.2
Cpa.g.sc166.18 Carica papaya HOM05D006050 ORTHO05D007457 9.4e-45 185.7 137 73.0
CARHR225070 Cardamine hirsuta HOM05D006050 ORTHO05D007457 1.8e-43 181.4 260 43.8
DCAR_029765 Daucus carota HOM05D006050 ORTHO05D007457 2.3e-43 181.0 173 56.6
MCO07G478 Micromonas commoda HOM05D006050 ORTHO05D007457 2.0e-42 177.9 353 38.8
SEGI_20862 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 3.3e-42 177.2 123 68.3
Pp3c6_19460 Physcomitrium patens HOM05D006050 ORTHO05D007457 2.4e-40 171.0 174 49.4
unitig_32.g11518 Utricularia gibba HOM05D006050 ORTHO05D007457 1.7e-38 164.9 235 43.8
Sopen02g019650 Solanum pennellii HOM05D006050 ORTHO05D007457 3.3e-34 150.6 325 36.6
Mapoly0042s0029 Marchantia polymorpha HOM05D006050 ORTHO05D007457 1.6e-31 141.7 154 50.0
AUR62030212 Chenopodium quinoa HOM05D006050 ORTHO05D007457 7.7e-31 139.4 144 53.5
PSO063G2775 Papaver somniferum HOM05D006050 ORTHO05D007457 5.5e-29 133.3 104 69.2
CSS0017405 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 1.7e-25 121.7 69 89.9
CSS0043541 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 3.8e-22 110.5 77 70.1
DCAR_011844 Daucus carota HOM05D006050 ORTHO05D007457 8.0e-20 102.8 89 58.4
COL.COLO4_31088 Corchorus olitorius HOM05D006050 ORTHO05D007457 3.8e-14 84.0 59 69.5
CSS0030855 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 1.6e-12 78.6 45 73.3
CSS0036908 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 1.6e-12 78.6 45 73.3
CSS0038270 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 3.7e-09 67.4 75 48.0
Cpa.g.sc166.16 Carica papaya HOM05D006050 ORTHO05D007457 7.7e-07 59.7 111 39.6


User provided reference genes

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