Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0175 Trochodendron aralioides HOM05D007784 ORTHO05D008654 9.6e-132 473.8 290 100.0
TAR627G0444 Trochodendron aralioides HOM05D007784 ORTHO05D008654 8.1e-123 444.1 290 94.1
Nn1g04167 Nelumbo nucifera HOM05D007784 ORTHO05D008654 4.1e-34 149.4 251 54.2
QL08p022546 Quercus lobata HOM05D007784 ORTHO05D008654 8.1e-30 135.2 255 45.9
Nn1g06458 Nelumbo nucifera HOM05D007784 ORTHO05D008654 5.2e-29 132.5 247 47.4
Cfa020564 Carpinus fangiana HOM05D007784 ORTHO05D008654 1.9e-26 124.0 260 46.5
Gohir.A01G061700 Gossypium hirsutum HOM05D007784 ORTHO05D008654 4.6e-25 119.4 258 43.0
Gohir.D01G048300 Gossypium hirsutum HOM05D007784 ORTHO05D008654 1.3e-24 117.9 262 43.1
Gorai.002G068100 Gossypium raimondii HOM05D007784 ORTHO05D008654 1.3e-24 117.9 262 43.1
Potri.001G398000 Populus trichocarpa HOM05D007784 ORTHO05D008654 2.3e-24 117.1 262 40.1
CiPaw.11G171500 Carya illinoinensis HOM05D007784 ORTHO05D008654 3.0e-24 116.7 280 41.8
Thecc.07G095100 Theobroma cacao HOM05D007784 ORTHO05D008654 3.9e-24 116.3 258 43.0
Duzib268G0159 Durio zibethinus HOM05D007784 ORTHO05D008654 5.1e-24 115.9 257 44.0
Potri.011G116600 Populus trichocarpa HOM05D007784 ORTHO05D008654 1.5e-23 114.4 261 42.1
Duzib213G0720 Durio zibethinus HOM05D007784 ORTHO05D008654 1.2e-22 111.3 252 43.3
Ciclev10010505m.g Citrus clementina HOM05D007784 ORTHO05D008654 8.1e-22 108.6 260 39.6
Sabra11G0102100 Salix brachista HOM05D007784 ORTHO05D008654 3.1e-21 106.7 261 39.8
Aqoxy1G02344 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 5.2e-21 105.9 231 42.9
Aqoxy5G00008 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 8.9e-21 105.1 231 42.4
MSTRG.15239 Avicennia marina HOM05D007784 ORTHO05D008654 5.8e-20 102.4 175 53.1
Sabra16G0260800 Salix brachista HOM05D007784 ORTHO05D008654 7.6e-20 102.1 262 38.2
COL.COLO4_36703 Corchorus olitorius HOM05D007784 ORTHO05D008654 1.3e-19 101.3 260 40.8
Prupe.4G177000 Prunus persica HOM05D007784 ORTHO05D008654 1.3e-19 101.3 249 43.4
CiPaw.12G119800 Carya illinoinensis HOM05D007784 ORTHO05D008654 3.8e-19 99.8 237 42.2
Hma1.2p1_0387F.1_g141980 Hydrangea macrophylla HOM05D007784 ORTHO05D008654 8.4e-19 98.6 258 34.1
MD03G1230800 Malus domestica HOM05D007784 ORTHO05D008654 1.1e-18 98.2 261 40.2
ClCG11G017920 Citrullus lanatus HOM05D007784 ORTHO05D008654 4.2e-18 96.3 265 33.6
PGR031G1623 Punica granatum HOM05D007784 ORTHO05D008654 2.3e-16 90.5 278 36.7
Gohir.D13G151926 Gossypium hirsutum HOM05D007784 ORTHO05D008654 3.0e-16 90.1 187 46.0
Cc05_g11830 Coffea canephora HOM05D007784 ORTHO05D008654 5.1e-16 89.4 256 39.5
Manes.03G106700 Manihot esculenta HOM05D007784 ORTHO05D008654 5.1e-16 89.4 276 38.0
RcHm_v2.0_Chr5g0032821 Rosa chinensis HOM05D007784 ORTHO05D008654 8.7e-16 88.6 262 40.1
Manes.15G088900 Manihot esculenta HOM05D007784 ORTHO05D008654 1.1e-15 88.2 204 44.1
CSS0002410 Camellia sinensis var. sinensis HOM05D007784 ORTHO05D008654 3.3e-15 86.7 250 38.0
Cpa.g.c36086 Carica papaya HOM05D007784 ORTHO05D008654 3.3e-15 86.7 268 39.2
FAN21G3158 Fragaria x ananassa HOM05D007784 ORTHO05D008654 3.1e-13 80.1 261 37.5
Solyc07g062960.1 Solanum lycopersicum HOM05D007784 ORTHO05D008654 3.1e-13 80.1 199 43.2
CAN.G162.41 Capsicum annuum HOM05D007784 ORTHO05D008654 5.3e-13 79.3 256 33.2
FvH4_3g19630 Fragaria vesca HOM05D007784 ORTHO05D008654 6.9e-13 79.0 261 37.5
FAN11G2265 Fragaria x ananassa HOM05D007784 ORTHO05D008654 6.9e-13 79.0 261 37.5
Sopen07g031150 Solanum pennellii HOM05D007784 ORTHO05D008654 6.9e-13 79.0 197 42.6
MELO3C025600.2 Cucumis melo HOM05D007784 ORTHO05D008654 1.2e-12 78.2 266 35.7
PGSC0003DMG400012442 Solanum tuberosum HOM05D007784 ORTHO05D008654 1.2e-12 78.2 267 36.0
FAN25G3654 Fragaria x ananassa HOM05D007784 ORTHO05D008654 2.0e-12 77.4 261 39.8
PSO541G4378 Papaver somniferum HOM05D007784 ORTHO05D008654 2.0e-12 77.4 250 40.8
Lalb_Chr03g0030731 Lupinus albus HOM05D007784 ORTHO05D008654 5.8e-12 75.9 252 35.7
Sc16g0007130 Simmondsia chinensis HOM05D007784 ORTHO05D008654 7.6e-12 75.5 226 33.2
Actinidia09697 Actinidia chinensis HOM05D007784 ORTHO05D008654 9.9e-12 75.1 181 44.8
Migut.M00785 Erythranthe guttata HOM05D007784 ORTHO05D008654 9.9e-12 75.1 182 44.0
Oeu051079.1 Olea europaea HOM05D007784 ORTHO05D008654 1.3e-11 74.7 175 46.9
CsaV3_4G033550 Cucumis sativus L. HOM05D007784 ORTHO05D008654 1.7e-11 74.3 264 38.3
FAN16G2579 Fragaria x ananassa HOM05D007784 ORTHO05D008654 2.2e-11 73.9 251 36.7
PGR083G0236 Punica granatum HOM05D007784 ORTHO05D008654 2.9e-11 73.6 180 32.8
EL10Ac4g08222 Beta vulgaris HOM05D007784 ORTHO05D008654 4.9e-11 72.8 266 40.2
AL3G27640 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 6.4e-11 72.4 239 32.6
CARHR090230 Cardamine hirsuta HOM05D009851 ORTHO05D008654 1.1e-10 71.6 238 31.1
Psat4g131560 Pisum sativum HOM05D007784 ORTHO05D008654 1.4e-10 71.2 244 29.1
AT3G15250 Arabidopsis thaliana HOM05D009851 ORTHO05D008654 7.1e-10 68.9 251 32.7
Carub.0003s1490 Capsella rubella HOM05D009851 ORTHO05D008654 1.2e-09 68.2 237 35.4
Gorai.013G169700 Gossypium raimondii HOM05D007784 ORTHO05D008654 1.2e-09 68.2 145 49.7
Atru.chr2.2433 Acer truncatum HOM05D007784 ORTHO05D008654 2.1e-09 67.4 281 33.1
Dinv14932 Davidia involucrata HOM05D007784 ORTHO05D008654 2.1e-09 67.4 248 30.2
Lalb_Chr01g0006591 Lupinus albus HOM05D007784 ORTHO05D008654 2.1e-09 67.4 235 34.0
BcaB06g29548 Brassica carinata HOM05D009851 ORTHO05D008654 2.7e-09 67.0 249 36.1
TWI38G0880 Tripterygium wilfordii HOM05D007784 ORTHO05D008654 2.7e-09 67.0 183 41.0
AUR62036175 Chenopodium quinoa HOM05D007784 ORTHO05D008654 4.6e-09 66.2 262 26.7
Haze_09448 Corylus avellana HOM05D007784 ORTHO05D008654 7.9e-09 65.5 108 45.4
Peaxi162Scf00069g01710 Petunia axillaris HOM05D007784 ORTHO05D008654 1.0e-08 65.1 175 33.7
Rhsim06G0201400 Rhododendron simsii HOM05D007784 ORTHO05D008654 1.3e-08 64.7 205 39.5
Sp3g13450 Schrenkiella parvula HOM05D009851 ORTHO05D008654 2.3e-08 63.9 230 38.3
Thhalv10021913m.g Eutrema salsugineum HOM05D009851 ORTHO05D008654 3.9e-08 63.2 235 34.9
BcaB06g29549 Brassica carinata HOM05D009851 ORTHO05D008654 8.7e-08 62.0 225 34.2
BolC5t33884H Brassica oleracea HOM05D009851 ORTHO05D008654 1.9e-07 60.8 227 31.7
C05p51990 Brassica napus HOM05D009851 ORTHO05D008654 3.3e-07 60.1 227 32.2
Ah.06g184500 Amaranthus hybridus HOM05D007784 ORTHO05D008654 7.4e-07 58.9 209 30.6
A05p34230 Brassica napus HOM05D009851 ORTHO05D008654 9.6e-07 58.5 223 33.6
BraA05t22243Z Brassica rapa HOM05D009851 ORTHO05D008654 9.6e-07 58.5 223 33.6
CANSAT56G4083 Cannabis sativa HOM05D007784 ORTHO05D008654 2.1e-06 57.4 290 35.9
Ca_23050_v3 Cicer arietinum L. HOM05D007784 ORTHO05D008654 2.8e-06 57.0 235 33.2
Medtr0598s0020 Medicago truncatula HOM05D007784 ORTHO05D008654 4.8e-06 56.2 188 37.2
DCAR_019564 Daucus carota HOM05D007784 ORTHO05D008654 8.1e-06 55.5 185 41.6


User provided reference genes

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