Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 6.4e-96 354.0 168 100.0
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 1.1e-60 236.9 160 71.2
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 1.4e-55 219.9 158 63.9
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 7.2e-55 217.6 144 72.2
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 1.2e-54 216.9 153 69.3
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 2.1e-54 216.1 161 63.4
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 2.5e-52 209.1 142 68.3
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 2.5e-52 209.1 144 66.7
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 4.3e-52 208.4 161 63.4
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 9.7e-52 207.2 157 61.8
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 1.3e-51 206.8 161 60.9
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 1.7e-51 206.5 140 68.6
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 3.7e-51 205.3 162 59.9
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 3.7e-51 205.3 141 66.7
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 3.7e-51 205.3 161 63.4
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 4.8e-51 204.9 146 67.8
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 6.3e-51 204.5 161 60.2
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 6.3e-51 204.5 157 63.1
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 1.4e-50 203.4 158 62.7
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 1.8e-50 203.0 165 61.2
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 6.9e-50 201.1 157 60.5
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 6.9e-50 201.1 150 64.0
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 9.1e-50 200.7 175 61.1
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 1.2e-49 200.3 157 61.8
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 1.2e-49 200.3 159 59.1
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 2.0e-49 199.5 163 61.3
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 2.6e-49 199.1 163 59.5
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 3.4e-49 198.7 155 61.9
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 4.5e-49 198.4 145 64.1
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 5.9e-49 198.0 163 59.5
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 5.9e-49 198.0 157 61.1
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 7.7e-49 197.6 137 65.7
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 7.7e-49 197.6 157 59.9
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 1.0e-48 197.2 164 59.8
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 1.3e-48 196.8 140 65.7
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 2.2e-48 196.1 154 63.0
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 2.2e-48 196.1 155 61.3
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 2.9e-48 195.7 149 65.1
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 2.9e-48 195.7 154 63.0
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 2.9e-48 195.7 154 61.0
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 3.8e-48 195.3 128 74.2
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 6.5e-48 194.5 154 60.4
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 1.9e-47 193.0 149 63.1
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 4.2e-47 191.8 151 63.6
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 7.2e-47 191.0 160 58.1
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 1.2e-46 190.3 157 58.0
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 1.2e-46 190.3 155 57.4
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 1.2e-46 190.3 155 57.4
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 6.1e-46 188.0 154 56.5
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 1.0e-45 187.2 139 65.5
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 1.0e-45 187.2 162 56.2
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 1.4e-45 186.8 126 70.6
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 1.4e-45 186.8 143 63.6
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 2.3e-45 186.0 154 55.8
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 2.3e-45 186.0 154 55.8
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 2.3e-45 186.0 150 59.3
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 3.0e-45 185.7 154 55.8
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 3.9e-45 185.3 126 69.8
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 5.1e-45 184.9 154 55.8
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 5.1e-45 184.9 154 55.8
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 5.1e-45 184.9 151 61.6
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 5.1e-45 184.9 155 54.8
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 8.8e-45 184.1 154 55.8
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 8.8e-45 184.1 142 57.7
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 8.8e-45 184.1 140 61.4
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 8.8e-45 184.1 150 62.7
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 8.8e-45 184.1 150 62.0
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 8.8e-45 184.1 157 56.1
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 1.5e-44 183.3 161 57.8
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 2.6e-44 182.6 163 56.4
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 3.3e-44 182.2 161 53.4
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 3.3e-44 182.2 148 59.5
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 4.8e-43 178.3 153 54.2
PGR142G2582 Punica granatum HOM05D006750 ORTHO05D008426 1.8e-42 176.4 148 55.4
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 5.3e-42 174.9 142 55.6
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 4.5e-41 171.8 156 55.1
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 1.0e-40 170.6 138 58.7
ECA246G4127 Erigeron canadensis HOM05D006750 ORTHO05D008426 3.8e-40 168.7 129 62.0
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 3.8e-40 168.7 142 57.0
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 3.8e-40 168.7 157 55.4
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 3.8e-40 168.7 159 50.9
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 3.8e-40 168.7 142 54.9
Os02g0168900 Oryza sativa ssp. japonica HOM05D006750 ORTHO05D008426 1.5e-39 166.8 157 52.2
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 5.5e-39 164.9 163 52.8
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 7.2e-39 164.5 140 54.3
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 1.2e-38 163.7 145 53.1
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 2.1e-38 162.9 136 55.9
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 2.3e-37 159.5 161 47.2
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 1.5e-36 156.8 161 46.6
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 2.6e-36 156.0 152 50.0
AUR62007362 Chenopodium quinoa HOM05D006750 ORTHO05D008426 3.3e-36 155.6 138 54.3
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 1.7e-35 153.3 154 49.4
AUR62018626 Chenopodium quinoa HOM05D006750 ORTHO05D008426 1.8e-34 149.8 138 52.9
Cfa000723 Carpinus fangiana HOM05D006750 ORTHO05D008426 3.1e-34 149.1 107 66.4
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 1.2e-33 147.1 172 44.2
COL.COLO4_30981 Corchorus olitorius HOM05D006750 ORTHO05D008426 5.9e-33 144.8 113 62.8
Sc05g0005750 Simmondsia chinensis HOM05D006750 ORTHO05D008426 1.2e-30 137.1 131 55.0
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 2.7e-30 136.0 109 59.6
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 3.0e-29 132.5 93 71.0
ATR0763G132 Amborella trichopoda HOM05D006750 ORTHO05D008426 6.8e-29 131.3 104 59.6
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 1.5e-28 130.2 148 50.7
SMO367G1186 Selaginella moellendorffii HOM05D006750 ORTHO05D008426 2.4e-26 122.9 128 40.6
Mapoly0007s0049 Marchantia polymorpha HOM05D006750 ORTHO05D008426 3.8e-24 115.5 141 41.8
CBR_g39953 Chara braunii HOM05D006750 ORTHO05D008426 5.0e-24 115.2 190 36.3
Pp3c2_9480 Physcomitrium patens HOM05D006750 ORTHO05D008426 2.5e-23 112.8 130 42.3
SHI31544 Sapria himalayana HOM05D006750 ORTHO05D008426 1.6e-22 110.2 213 33.8
CARHR087370 Cardamine hirsuta HOM05D006750 ORTHO05D008426 3.6e-22 109.0 87 58.6
Hund11170 Selenicereus undatus HOM05D006750 ORTHO05D008426 2.3e-21 106.3 84 56.0
Cpa.g.sc135.32 Carica papaya HOM05D006750 ORTHO05D008426 9.8e-20 100.9 87 59.8
Zm00001eb233030 Zea mays HOM05D006750 ORTHO05D008426 1.3e-19 100.5 157 36.3
AagrBONN_evm.TU.Sc2ySwM_344.3424 Anthoceros agrestis HOM05D006750 ORTHO05D008426 2.3e-16 89.7 102 41.2
Sopen02g018170 Solanum pennellii HOM05D006750 ORTHO05D008426 9.5e-15 84.3 60 70.0
Cre08.g378100 Chlamydomonas reinhardtii HOM05D006750 ORTHO05D008426 9.8e-12 74.3 128 33.6
Hund11169 Selenicereus undatus HOM05D006750 ORTHO05D008426 7.0e-10 68.2 84 44.0
Zm00001eb233050 Zea mays HOM05D006750 ORTHO05D008426 7.0e-10 68.2 151 32.5
MBI18_g36125_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D018396 5.9e-09 65.1 60 48.3
TPR.G24917 Trifolium pratense HOM05D006750 ORTHO05D008426 5.9e-09 65.1 56 53.6
PRCOL_00005799 Prasinoderma coloniale HOM05D006750 ORTHO05D008426 7.8e-09 64.7 124 29.8


User provided reference genes

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