Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0088 Trochodendron aralioides HOM05D006665 ORTHO05D008327 3.7e-224 781.2 378 100.0
Nn3g21119 Nelumbo nucifera HOM05D006665 ORTHO05D008327 2.5e-180 635.6 379 81.5
QL05p048519 Quercus lobata HOM05D006665 ORTHO05D008327 1.6e-171 606.3 380 76.1
GSVIVG01021249001 Vitis vinifera HOM05D006665 ORTHO05D008327 1.6e-166 589.7 375 74.9
Cfa000642 Carpinus fangiana HOM05D006665 ORTHO05D008327 2.3e-165 585.9 376 73.1
Dinv32346 Davidia involucrata HOM05D006665 ORTHO05D008327 2.1e-163 579.3 375 75.5
HanXRQChr15g0480791 Helianthus annuus HOM05D006665 ORTHO05D008327 1.4e-162 576.6 376 72.9
CSS0008142 Camellia sinensis var. sinensis HOM05D006665 ORTHO05D008327 4.0e-162 575.1 371 72.8
Thecc.06G166800 Theobroma cacao HOM05D006665 ORTHO05D008327 3.4e-161 572.0 376 72.1
PSO170G0566 Papaver somniferum HOM05D000074 ORTHO05D000220 2.9e-160 568.9 375 74.4
Aqoxy4G00257 Aquilegia oxysepala HOM05D006665 ORTHO05D008327 3.7e-160 568.5 375 73.3
Duzib235G0558 Durio zibethinus HOM05D006665 ORTHO05D008327 5.4e-159 564.7 376 70.2
PGR042G0915 Punica granatum HOM05D006665 ORTHO05D008327 5.9e-158 561.2 374 68.7
COL.COLO4_31251 Corchorus olitorius HOM05D006665 ORTHO05D008327 7.8e-158 560.8 395 67.3
Gohir.D10G035900 Gossypium hirsutum HOM05D006665 ORTHO05D008327 7.8e-158 560.8 377 69.8
Gohir.A10G035200 Gossypium hirsutum HOM05D006665 ORTHO05D008327 1.7e-157 559.7 377 69.5
Gorai.011G037800 Gossypium raimondii HOM05D006665 ORTHO05D008327 2.3e-157 559.3 377 69.5
MBI07_g09544_MAGBIO Magnolia biondii HOM05D006665 ORTHO05D008327 3.9e-157 558.5 379 71.8
TWI73G0293 Tripterygium wilfordii HOM05D006665 ORTHO05D008327 6.6e-157 557.8 373 70.0
Potri.011G069700 Populus trichocarpa HOM05D006665 ORTHO05D008327 8.6e-157 557.4 376 70.5
Sabra11G0053800 Salix brachista HOM05D006665 ORTHO05D008327 5.6e-156 554.7 376 70.5
Ciclev10015641m.g Citrus clementina HOM05D006665 ORTHO05D008327 7.3e-156 554.3 379 69.4
Prupe.4G065800 Prunus persica HOM05D006665 ORTHO05D008327 1.8e-154 549.7 377 71.1
Manes.17G058400 Manihot esculenta HOM05D006665 ORTHO05D008327 2.3e-154 549.3 372 69.9
THA.LOC104812882 Tarenaya hassleriana HOM05D006665 ORTHO05D008327 4.0e-154 548.5 379 69.1
Cc02_g15490 Coffea canephora HOM05D006665 ORTHO05D008327 2.0e-153 546.2 376 68.6
Eucgr.E04353 Eucalyptus grandis HOM05D006665 ORTHO05D008327 9.8e-153 543.9 373 69.7
Eucgr.E02766 Eucalyptus grandis HOM05D006665 ORTHO05D008327 2.2e-152 542.7 373 69.4
FAN23G0824 Fragaria x ananassa HOM05D006665 ORTHO05D008327 2.2e-152 542.7 375 71.2
FvH4_1g07520 Fragaria vesca HOM05D006665 ORTHO05D008327 2.4e-151 539.3 375 70.4
RcHm_v2.0_Chr5g0011451 Rosa chinensis HOM05D006665 ORTHO05D008327 5.4e-151 538.1 375 70.9
FAN26G0384 Fragaria x ananassa HOM05D006665 ORTHO05D008327 1.6e-150 536.6 375 69.9
CANSAT80G2447 Cannabis sativa HOM05D000074 ORTHO05D000220 2.7e-150 535.8 373 69.2
PGSC0003DMG400028425 Solanum tuberosum HOM05D006665 ORTHO05D008327 2.7e-150 535.8 375 67.5
Sed0010934 Sechium edule HOM05D006665 ORTHO05D008327 1.0e-149 533.9 373 68.1
FAN19G1242 Fragaria x ananassa HOM05D006665 ORTHO05D008327 2.3e-149 532.7 376 69.9
CiPaw.09G072200 Carya illinoinensis HOM05D006665 ORTHO05D008327 3.0e-149 532.3 376 67.8
Sopen02g021210 Solanum pennellii HOM05D006665 ORTHO05D008327 3.0e-149 532.3 375 66.9
Solyc02g072230.3 Solanum lycopersicum HOM05D006665 ORTHO05D008327 8.6e-149 530.8 375 66.4
Nitab4.5_0000437g0180 Nicotiana tabacum HOM05D006665 ORTHO05D008327 1.1e-148 530.4 382 66.2
Lalb_Chr13g0295211 Lupinus albus HOM05D006665 ORTHO05D008327 9.5e-148 527.3 373 68.6
MD05G1296500 Malus domestica HOM05D006665 ORTHO05D008327 1.6e-147 526.6 373 68.4
CsaV3_1G033140 Cucumis sativus L. HOM05D006665 ORTHO05D008327 1.1e-146 523.9 374 66.3
Nitab4.5_0008526g0030 Nicotiana tabacum HOM05D006665 ORTHO05D008327 6.8e-146 521.2 375 66.1
AT5G45760 Arabidopsis thaliana HOM05D006665 ORTHO05D008327 1.2e-145 520.4 380 64.2
AL8G12850 Arabidopsis lyrata HOM05D006665 ORTHO05D008327 2.0e-145 519.6 380 65.3
Carub.0008s0223 Capsella rubella HOM05D006665 ORTHO05D008327 2.6e-145 519.2 376 64.9
MSTRG.7424 Avicennia marina HOM05D006665 ORTHO05D008327 9.8e-145 517.3 375 66.4
CARHR176220 Cardamine hirsuta HOM05D006665 ORTHO05D008327 1.7e-144 516.5 380 64.7
ECA236G1698 Erigeron canadensis HOM05D000074 ORTHO05D000220 3.7e-144 515.4 372 66.4
Sp2g10670 Schrenkiella parvula HOM05D006665 ORTHO05D008327 1.6e-142 510.0 377 64.2
DCAR_005186 Daucus carota HOM05D006665 ORTHO05D008327 2.1e-142 509.6 371 64.2
Lj2C318T4 Lonicera japonica HOM05D006665 ORTHO05D008327 1.0e-141 507.3 375 67.2
Sabra11G0057300 Salix brachista HOM05D000074 ORTHO05D000220 1.7e-141 506.5 351 68.7
A09p21920 Brassica napus HOM05D006665 ORTHO05D008327 7.3e-140 501.1 371 64.7
Migut.M01013 Erythranthe guttata HOM05D006665 ORTHO05D008327 2.1e-139 499.6 374 63.4
BolC9t55679H Brassica oleracea HOM05D006665 ORTHO05D008327 1.1e-138 497.3 370 64.1
C09p28090 Brassica napus HOM05D006665 ORTHO05D008327 6.8e-138 494.6 370 64.1
FAN26G1216 Fragaria x ananassa HOM05D006665 ORTHO05D008327 3.4e-137 492.3 375 66.1
BraA09t37795Z Brassica rapa HOM05D006665 ORTHO05D008327 8.4e-136 487.6 362 64.6
BcaB07g30869 Brassica carinata HOM05D006665 ORTHO05D008327 1.2e-134 483.8 368 62.8
Thhalv10000923m.g Eutrema salsugineum HOM05D006665 ORTHO05D008327 1.2e-134 483.8 400 59.5
Phvul.002G240300 Phaseolus vulgaris HOM05D006665 ORTHO05D008327 1.7e-133 479.9 377 61.5
BcaC04g21745 Brassica carinata HOM05D006665 ORTHO05D008327 2.3e-133 479.6 362 63.5
Sc05g0006960 Simmondsia chinensis HOM05D006665 ORTHO05D008327 3.0e-133 479.2 368 62.2
Medtr8g086605 Medicago truncatula HOM05D006665 ORTHO05D008327 5.1e-133 478.4 380 60.5
Glyma.05G160032 Glycine max HOM05D006665 ORTHO05D008327 1.1e-132 477.2 378 61.9
ClCG03G007500 Citrullus lanatus HOM05D000074 ORTHO05D000220 1.5e-132 476.9 368 63.3
Aa31LG9G7310 Aethionema arabicum HOM05D006665 ORTHO05D008327 2.1e-131 473.0 384 60.9
Peaxi162Scf00371g00319 Petunia axillaris HOM05D006665 ORTHO05D008327 2.1e-131 473.0 373 61.4
Glyma.08G117600 Glycine max HOM05D006665 ORTHO05D008327 1.8e-130 469.9 377 60.2
TPR.G6756 Trifolium pratense HOM05D006665 ORTHO05D008327 2.6e-129 466.1 374 59.1
Lj4g0005276 Lotus japonicus HOM05D000074 ORTHO05D008327 4.4e-129 465.3 371 62.3
EL10Ac8g20571 Beta vulgaris HOM05D006665 ORTHO05D008327 7.1e-127 458.0 377 59.7
Os01g0205100 Oryza sativa ssp. japonica HOM05D006665 ORTHO05D008327 3.9e-125 452.2 375 59.5
arahy.Tifrunner.gnm1.ann1.L41MS4 Arachis hypogaea HOM05D006665 ORTHO05D008327 3.3e-124 449.1 373 61.4
arahy.Tifrunner.gnm1.ann1.UF726L Arachis hypogaea HOM05D006665 ORTHO05D008327 1.3e-120 437.2 367 60.8
AUR62027710 Chenopodium quinoa HOM05D006665 ORTHO05D008327 2.1e-118 429.9 368 56.8
Actinidia07650 Actinidia chinensis HOM05D006665 ORTHO05D008327 1.2e-113 414.1 252 74.6
ATR0012G051 Amborella trichopoda HOM05D006665 ORTHO05D008327 1.3e-107 394.0 312 63.8
SalBow8G2667 Salvia bowleyana HOM05D000074 ORTHO05D000220 3.4e-105 386.0 356 54.5
SEGI_17628 Sequoiadendron giganteum HOM05D006665 ORTHO05D008327 9.3e-103 377.9 379 48.8
Ah.14g087040 Amaranthus hybridus HOM05D006665 ORTHO05D008327 3.2e-95 352.8 403 48.6
CDE06G0006 Ceratophyllum demersum HOM05D006665 ORTHO05D008327 2.8e-91 339.7 354 54.2
Pp3c18_2320 Physcomitrium patens HOM05D006665 ORTHO05D008327 5.7e-84 315.5 380 43.4
Zm00001eb120830 Zea mays HOM05D006665 ORTHO05D008327 2.0e-81 307.0 293 53.6
vmacro16044 Vaccinium macrocarpon HOM05D006665 ORTHO05D008327 3.0e-77 293.1 223 65.0
Mapoly0020s0147 Marchantia polymorpha HOM05D006665 ORTHO05D008327 1.1e-76 291.2 376 42.8
Atru.chr10.1583 Acer truncatum HOM05D006665 ORTHO05D008327 1.8e-74 283.9 181 70.7
Rhsim02G0145600 Rhododendron simsii HOM05D006665 ORTHO05D008327 4.0e-69 266.2 208 65.9
Lsat_1_v5_gn_7_25921 Lactuca sativa HOM05D006665 ORTHO05D008327 4.4e-68 262.7 208 64.9
AagrBONN_evm.TU.Sc2ySwM_117.2766 Anthoceros agrestis HOM05D006665 ORTHO05D008327 3.1e-66 256.5 315 43.2
SMO118G0425 Selaginella moellendorffii HOM05D006665 ORTHO05D008327 3.5e-65 253.1 380 38.2
Haze_06187 Corylus avellana HOM05D006665 ORTHO05D008327 4.5e-65 252.7 185 70.8
Dinv12760 Davidia involucrata HOM05D006665 ORTHO05D008327 3.8e-64 249.6 233 57.1
Atru.chr10.1584 Acer truncatum HOM05D006665 ORTHO05D008327 8.5e-64 248.4 187 67.4
VMungo0251G1318 Vigna mungo HOM05D006665 ORTHO05D008327 1.2e-62 244.6 220 56.8
CBR_g34019 Chara braunii HOM05D006665 ORTHO05D008327 8.0e-62 241.9 413 37.3
Cpa.g.sc7.98 Carica papaya HOM05D006665 ORTHO05D008327 4.8e-59 232.6 149 69.1
BcaB06g27285 Brassica carinata HOM05D006665 ORTHO05D008327 3.5e-57 226.5 249 48.2
AUR62039464 Chenopodium quinoa HOM05D006665 ORTHO05D008327 7.2e-55 218.8 187 60.4
Hma1.2p1_0113F.1_g055090 Hydrangea macrophylla HOM05D006665 ORTHO05D008327 1.6e-54 217.6 212 55.7
Hma1.2p1_0113F.1_g055096 Hydrangea macrophylla HOM05D006665 ORTHO05D008327 1.6e-54 217.6 212 55.7
Hund25815 Selenicereus undatus HOM05D006665 ORTHO05D008327 1.3e-51 208.0 181 62.4
SGA_v2.0_scaffold1G00072 Striga asiatica HOM05D006665 ORTHO05D008327 1.5e-44 184.5 126 60.3
Oeu043117.1 Olea europaea HOM05D006665 ORTHO05D008327 3.4e-44 183.3 148 66.2
BcaB04g18653 Brassica carinata HOM05D006665 ORTHO05D008327 8.3e-43 178.7 151 58.3
vmacro16043 Vaccinium macrocarpon HOM05D006665 ORTHO05D008327 3.9e-40 169.9 100 72.0
Psat2g000080 Pisum sativum HOM05D006665 ORTHO05D008327 5.0e-40 169.5 140 60.0
Psat7g069040 Pisum sativum HOM05D006665 ORTHO05D008327 3.3e-39 166.8 265 40.8
Psat7g069080 Pisum sativum HOM05D006665 ORTHO05D008327 2.8e-38 163.7 122 58.2
Haze_06186 Corylus avellana HOM05D006665 ORTHO05D008327 4.7e-38 162.9 142 55.6
RcHm_v2.0_Chr5g0011471 Rosa chinensis HOM05D006665 ORTHO05D008327 4.6e-33 146.4 173 48.0
SEGI_34445 Sequoiadendron giganteum HOM05D006665 ORTHO05D008327 8.6e-24 115.5 100 49.0
Cre16.g678400 Chlamydomonas reinhardtii HOM05D006665 ORTHO05D008327 3.3e-23 113.6 295 30.5
arahy.Tifrunner.gnm1.ann1.XDX40G Arachis hypogaea HOM05D006665 ORTHO05D008327 2.8e-22 110.5 78 60.3
arahy.Tifrunner.gnm1.ann1.H6TAT4 Arachis hypogaea HOM05D006665 ORTHO05D008327 4.4e-20 103.2 98 51.0
MCO11G387 Micromonas commoda HOM05D006665 ORTHO05D008327 4.9e-19 99.8 350 26.6
FAN25G1258 Fragaria x ananassa HOM05D006665 ORTHO05D008327 1.1e-18 98.6 73 67.1
FvH4_3g07410 Fragaria vesca HOM05D006665 ORTHO05D008327 1.3e-16 91.7 162 41.4
Sabra04G0038600 Salix brachista HOM05D000074 ORTHO05D000220 2.3e-16 90.9 116 46.6
VMungo0251G0552 Vigna mungo HOM05D006665 ORTHO05D008327 8.1e-14 82.4 77 49.4
FAN11G1287 Fragaria x ananassa HOM05D006665 ORTHO05D008327 1.8e-13 81.3 202 33.2
arahy.Tifrunner.gnm1.ann1.IN0C4L Arachis hypogaea HOM05D006665 ORTHO05D012122 1.5e-07 61.6 80 43.8


User provided reference genes

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