Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0066 Trochodendron aralioides HOM05D000965 ORTHO05D000842 7.7e-73 276.9 130 100.0
TAR624G0211 Trochodendron aralioides HOM05D000965 ORTHO05D000842 3.3e-15 85.5 69 68.1
TAR627G0688 Trochodendron aralioides HOM05D000965 ORTHO05D000842 1.6e-14 83.2 71 63.4
TWI38G0946 Tripterygium wilfordii HOM05D000965 ORTHO05D000842 2.0e-12 76.3 67 58.2
TAR626G0308 Trochodendron aralioides HOM05D000965 ORTHO05D000842 4.4e-12 75.1 71 59.2
Ciclev10007809m.g Citrus clementina HOM05D000965 ORTHO05D000842 1.3e-11 73.6 69 52.2
arahy.Tifrunner.gnm1.ann1.CB1PHB Arachis hypogaea HOM05D000965 ORTHO05D000842 6.4e-11 71.2 70 48.6
Ca_04017_v3 Cicer arietinum L. HOM05D000965 ORTHO05D000842 6.4e-11 71.2 71 53.5
Glyma.13G272000 Glycine max HOM05D000965 ORTHO05D000842 8.4e-11 70.9 71 53.5
MD03G1238700 Malus domestica HOM05D000965 ORTHO05D000842 1.1e-10 70.5 66 54.5
Aqoxy1G02200 Aquilegia oxysepala HOM05D000965 ORTHO05D000842 1.4e-10 70.1 84 50.0
PSO063G0347 Papaver somniferum HOM05D000965 ORTHO05D000842 1.4e-10 70.1 52 61.5
PSO782G4953 Papaver somniferum HOM05D000965 ORTHO05D000842 1.4e-10 70.1 52 61.5
QL08p019383 Quercus lobata HOM05D000965 ORTHO05D000842 1.4e-10 70.1 67 53.7
GSVIVG01014240001 Vitis vinifera HOM05D000965 ORTHO05D000842 1.9e-10 69.7 69 55.1
GSVIVG01014243001 Vitis vinifera HOM05D000965 ORTHO05D000842 1.9e-10 69.7 69 55.1
arahy.Tifrunner.gnm1.ann1.L0FSAX Arachis hypogaea HOM05D000965 ORTHO05D000842 2.4e-10 69.3 70 47.1
Prupe.4G171300 Prunus persica HOM05D000965 ORTHO05D000842 2.4e-10 69.3 68 50.0
HPP92_000589 Vanilla planifolia HOM05D000965 ORTHO05D000842 2.4e-10 69.3 81 40.7
Lj3g0011696 Lotus japonicus HOM05D000965 ORTHO05D000842 3.2e-10 68.9 75 50.7
Prupe.4G171400 Prunus persica HOM05D000965 ORTHO05D000842 3.2e-10 68.9 67 49.3
Duzib268G1342 Durio zibethinus HOM05D000965 ORTHO05D000842 5.4e-10 68.2 73 53.4
VMungo1080G0104 Vigna mungo HOM05D000965 ORTHO05D000842 5.4e-10 68.2 71 52.1
Duzib264G0320 Durio zibethinus HOM05D000965 ORTHO05D000842 9.3e-10 67.4 69 53.6
Phvul.005G068100 Phaseolus vulgaris HOM05D000965 ORTHO05D000842 1.2e-09 67.0 71 50.7
SGA_v2.0_scaffold73G24206 Striga asiatica HOM05D000965 ORTHO05D000842 1.2e-09 67.0 68 48.5
MD03G1238600 Malus domestica HOM05D000965 ORTHO05D000842 1.6e-09 66.6 83 44.6
Thecc.01G241900 Theobroma cacao HOM05D000965 ORTHO05D000842 1.6e-09 66.6 68 47.1
Cpa.g.sc131.74 Carica papaya HOM05D000965 ORTHO05D000842 2.1e-09 66.2 70 45.7
FvH4_3g18770 Fragaria vesca HOM05D000965 ORTHO05D000842 2.1e-09 66.2 70 45.7
Gohir.D11G306200 Gossypium hirsutum HOM05D000965 ORTHO05D000842 2.1e-09 66.2 73 52.1
GSVIVG01020661001 Vitis vinifera HOM05D000965 ORTHO05D000842 2.1e-09 66.2 69 49.3
Aqoxy1G02202 Aquilegia oxysepala HOM05D000965 ORTHO05D000842 2.7e-09 65.9 83 45.8
arahy.Tifrunner.gnm1.ann1.44QEU2 Arachis hypogaea HOM05D000965 ORTHO05D000842 2.7e-09 65.9 71 49.3
Psat5g240640 Pisum sativum HOM05D000965 ORTHO05D000842 2.7e-09 65.9 70 50.0
FAN11G3471 Fragaria x ananassa HOM05D000965 ORTHO05D000842 3.5e-09 65.5 66 45.5
FAN11G3520 Fragaria x ananassa HOM05D000965 ORTHO05D000842 3.5e-09 65.5 70 45.7
FAN16G2744 Fragaria x ananassa HOM05D000965 ORTHO05D000842 3.5e-09 65.5 66 47.0
Hma1.2p1_0791F.1_g218510 Hydrangea macrophylla HOM05D000965 ORTHO05D000842 3.5e-09 65.5 69 52.2
MBI06_g25723_MAGBIO Magnolia biondii HOM05D000965 ORTHO05D000842 3.5e-09 65.5 68 50.0
QL08p019424 Quercus lobata HOM05D000965 ORTHO05D000842 3.5e-09 65.5 67 46.3
RcHm_v2.0_Chr5g0031601 Rosa chinensis HOM05D000965 ORTHO05D000842 3.5e-09 65.5 89 38.2
FAN16G1734 Fragaria x ananassa HOM05D000965 ORTHO05D000842 4.6e-09 65.1 71 46.5
Gorai.007G325800 Gossypium raimondii HOM05D000965 ORTHO05D000842 4.6e-09 65.1 73 50.7
Manes.15G090800 Manihot esculenta HOM05D000965 ORTHO05D000842 4.6e-09 65.1 68 50.0
vmacro09506 Vaccinium macrocarpon HOM05D000965 ORTHO05D000842 4.6e-09 65.1 77 46.8
PGR031G0785 Punica granatum HOM05D000965 ORTHO05D000842 6.0e-09 64.7 71 50.7
RcHm_v2.0_Chr5g0031591 Rosa chinensis HOM05D000965 ORTHO05D000842 6.0e-09 64.7 84 39.3
TWI39G0273 Tripterygium wilfordii HOM05D000965 ORTHO05D000842 6.0e-09 64.7 65 47.7
Psat3g066960 Pisum sativum HOM05D000965 ORTHO05D000842 7.8e-09 64.3 71 47.9
arahy.Tifrunner.gnm1.ann1.R06BW0 Arachis hypogaea HOM05D000965 ORTHO05D000842 1.0e-08 63.9 70 48.6
Gohir.A11G286900 Gossypium hirsutum HOM05D000965 ORTHO05D000842 1.0e-08 63.9 73 49.3
PGR083G1443 Punica granatum HOM05D000965 ORTHO05D000842 1.0e-08 63.9 71 47.9
vmacro11905 Vaccinium macrocarpon HOM05D000965 ORTHO05D000842 1.0e-08 63.9 71 46.5
Atru.chr2.2309 Acer truncatum HOM05D000965 ORTHO05D000842 1.3e-08 63.5 71 42.3
CSS0004325 Camellia sinensis var. sinensis HOM05D000965 ORTHO05D000842 1.3e-08 63.5 71 46.5
Duzib213G0448 Durio zibethinus HOM05D000965 ORTHO05D000842 1.3e-08 63.5 48 62.5
FvH4_3g18760 Fragaria vesca HOM05D000965 ORTHO05D000842 1.3e-08 63.5 66 45.5
TPR.G9225 Trifolium pratense HOM05D000965 ORTHO05D000842 1.3e-08 63.5 70 47.1
CiPaw.12G115400 Carya illinoinensis HOM05D000965 ORTHO05D000842 1.7e-08 63.2 67 47.8
Lalb_Chr01g0016711 Lupinus albus HOM05D000965 ORTHO05D000842 1.7e-08 63.2 70 51.4
Prupe.3G125200 Prunus persica HOM05D000965 ORTHO05D000842 1.7e-08 63.2 49 57.1
QL08p041117 Quercus lobata HOM05D000965 ORTHO05D000842 1.7e-08 63.2 51 60.8
COL.COLO4_37527 Corchorus olitorius HOM05D000965 ORTHO05D000842 2.3e-08 62.8 68 45.6
MELO3C025627.2 Cucumis melo HOM05D000965 ORTHO05D000842 2.3e-08 62.8 82 42.7
Dinv14961 Davidia involucrata HOM05D000965 ORTHO05D000842 2.3e-08 62.8 69 46.4
Lalb_Chr25g0286041 Lupinus albus HOM05D000965 ORTHO05D000842 2.3e-08 62.8 70 48.6
Zm00001eb238560 Zea mays HOM05D000965 ORTHO05D000842 2.3e-08 62.8 66 45.5
Actinidia18786 Actinidia chinensis HOM05D000965 ORTHO05D000842 3.0e-08 62.4 48 56.2
CANSAT35G0063 Cannabis sativa HOM05D000965 ORTHO05D000842 3.0e-08 62.4 74 45.9
CiPaw.03G184200 Carya illinoinensis HOM05D000965 ORTHO05D000842 3.0e-08 62.4 67 46.3
MD11G1258400 Malus domestica HOM05D000965 ORTHO05D000842 3.0e-08 62.4 68 47.1
vmacro11906 Vaccinium macrocarpon HOM05D000965 ORTHO05D000842 3.0e-08 62.4 56 50.0
Actinidia12551 Actinidia chinensis HOM05D000965 ORTHO05D000842 3.9e-08 62.0 66 45.5
Cc05_g11460 Coffea canephora HOM05D000965 ORTHO05D000842 3.9e-08 62.0 69 52.2
Eucgr.F01191 Eucalyptus grandis HOM05D000965 ORTHO05D000842 3.9e-08 62.0 68 45.6
MBI02_g29715_MAGBIO Magnolia biondii HOM05D000965 ORTHO05D000842 3.9e-08 62.0 66 42.4
Nitab4.5_0003202g0060 Nicotiana tabacum HOM05D000965 ORTHO05D000842 3.9e-08 62.0 74 44.6
Rhsim04G0023900 Rhododendron simsii HOM05D000965 ORTHO05D000842 3.9e-08 62.0 69 47.8
Sed0018014 Sechium edule HOM05D000965 ORTHO05D000842 3.9e-08 62.0 70 48.6
Zm00001eb120100 Zea mays HOM05D000965 ORTHO05D000842 3.9e-08 62.0 66 47.0
CiPaw.11G165000 Carya illinoinensis HOM05D000965 ORTHO05D000842 5.1e-08 61.6 74 45.9
PSO675G5407 Papaver somniferum HOM05D000965 ORTHO05D000842 5.1e-08 61.6 47 57.4
ATR0602G194 Amborella trichopoda HOM05D000965 ORTHO05D000842 6.6e-08 61.2 66 48.5
ClCG11G017670 Citrullus lanatus HOM05D000965 ORTHO05D000842 6.6e-08 61.2 68 47.1
Sed0024855 Sechium edule HOM05D000965 ORTHO05D000842 6.6e-08 61.2 70 48.6
Thecc.07G103400 Theobroma cacao HOM05D000965 ORTHO05D000842 6.6e-08 61.2 48 60.4
FAN25G3132 Fragaria x ananassa HOM05D000965 ORTHO05D000842 8.7e-08 60.8 66 42.4
Medtr2g078240 Medicago truncatula HOM05D000965 ORTHO05D000842 8.7e-08 60.8 71 46.5
Os01g0212400 Oryza sativa ssp. japonica HOM05D000965 ORTHO05D000842 8.7e-08 60.8 66 43.9
Actinidia35227 Actinidia chinensis HOM05D000965 ORTHO05D000842 1.1e-07 60.5 69 44.9
Ciclev10018123m.g Citrus clementina HOM05D000965 ORTHO05D000842 1.1e-07 60.5 67 50.7
Haze_13316 Corylus avellana HOM05D000965 ORTHO05D000842 1.1e-07 60.5 69 40.6
CsaV3_4G033290 Cucumis sativus L. HOM05D000965 ORTHO05D000842 1.1e-07 60.5 70 45.7
Migut.M00754 Erythranthe guttata HOM05D000965 ORTHO05D000842 1.1e-07 60.5 68 44.1
Eucgr.L03257 Eucalyptus grandis HOM05D000965 ORTHO05D000842 1.1e-07 60.5 69 40.6
MD17G1233800 Malus domestica HOM05D000965 ORTHO05D000842 1.1e-07 60.5 49 55.1
RcHm_v2.0_Chr5g0031571 Rosa chinensis HOM05D000965 ORTHO05D000842 1.1e-07 60.5 66 42.4
Sabra16G0247300 Salix brachista HOM05D000965 ORTHO05D000842 1.1e-07 60.5 67 44.8
Atru.chr2.2271 Acer truncatum HOM05D000965 ORTHO05D000842 1.5e-07 60.1 68 36.8
Cfa014696 Carpinus fangiana HOM05D000965 ORTHO05D000842 1.5e-07 60.1 68 42.6
Cfa019607 Carpinus fangiana HOM05D000965 ORTHO05D000842 1.5e-07 60.1 72 44.4
Haze_09362 Corylus avellana HOM05D000965 ORTHO05D000842 1.5e-07 60.1 73 43.8
Gohir.D01G045200 Gossypium hirsutum HOM05D000965 ORTHO05D000842 1.5e-07 60.1 73 47.9
Gorai.002G064800 Gossypium raimondii HOM05D000965 ORTHO05D000842 1.5e-07 60.1 73 47.9
SGA_v2.0_scaffold34G13766 Striga asiatica HOM05D000965 ORTHO05D000842 1.5e-07 60.1 70 44.3
Cfa019605 Carpinus fangiana HOM05D000965 ORTHO05D000842 1.9e-07 59.7 72 45.8
COL.COLO4_04892 Corchorus olitorius HOM05D000965 ORTHO05D000842 1.9e-07 59.7 47 57.4
Gohir.A01G059100 Gossypium hirsutum HOM05D000965 ORTHO05D000842 1.9e-07 59.7 48 56.2
MBI02_g29716_MAGBIO Magnolia biondii HOM05D000965 ORTHO05D000842 1.9e-07 59.7 66 45.5
PSO541G0589 Papaver somniferum HOM05D000965 ORTHO05D000842 1.9e-07 59.7 46 58.7
Rhsim06G0204400 Rhododendron simsii HOM05D000965 ORTHO05D000842 1.9e-07 59.7 69 44.9
Rhsim06G0204600 Rhododendron simsii HOM05D000965 ORTHO05D000842 1.9e-07 59.7 70 41.4
RcHm_v2.0_Chr2g0128851 Rosa chinensis HOM05D000965 ORTHO05D000842 1.9e-07 59.7 46 54.3
Solyc07g062700.3 Solanum lycopersicum HOM05D000965 ORTHO05D000842 1.9e-07 59.7 71 46.5
Sopen07g030930 Solanum pennellii HOM05D000965 ORTHO05D000842 1.9e-07 59.7 71 46.5
Aqoxy1G02203 Aquilegia oxysepala HOM05D000965 ORTHO05D000842 2.5e-07 59.3 59 42.4
Aqoxy4G01678 Aquilegia oxysepala HOM05D000965 ORTHO05D000842 2.5e-07 59.3 59 42.4
DCAR_017161 Daucus carota HOM05D000965 ORTHO05D000842 2.5e-07 59.3 84 34.5
Atru.chr2.2261 Acer truncatum HOM05D000965 ORTHO05D000842 3.3e-07 58.9 71 39.4
Rhsim06G0204200 Rhododendron simsii HOM05D000965 ORTHO05D000842 3.3e-07 58.9 69 42.0
Thecc.07G102700 Theobroma cacao HOM05D000965 ORTHO05D000842 3.3e-07 58.9 69 46.4
BcaC01g01370 Brassica carinata HOM05D000965 ORTHO05D000842 5.6e-07 58.2 69 46.4
C03p91260 Brassica napus HOM05D000965 ORTHO05D000842 5.6e-07 58.2 69 46.4
BolC3t21441H Brassica oleracea HOM05D000965 ORTHO05D000842 5.6e-07 58.2 69 46.4
Thhalv10011341m.g Eutrema salsugineum HOM05D000965 ORTHO05D000842 5.6e-07 58.2 71 45.1
FAN21G0207 Fragaria x ananassa HOM05D000965 ORTHO05D000842 5.6e-07 58.2 50 50.0
Nn7g36644 Nelumbo nucifera HOM05D000965 ORTHO05D000842 5.6e-07 58.2 56 46.4
Peaxi162Scf00000g02517 Petunia axillaris HOM05D000965 ORTHO05D000842 5.6e-07 58.2 71 42.3
Actinidia12550 Actinidia chinensis HOM05D000965 ORTHO05D000842 7.3e-07 57.8 48 52.1
Eucgr.A01890 Eucalyptus grandis HOM05D000965 ORTHO05D000842 7.3e-07 57.8 55 49.1
SalBow8G0695 Salvia bowleyana HOM05D000965 ORTHO05D000842 7.3e-07 57.8 66 48.5
PGSC0003DMG400012434 Solanum tuberosum HOM05D000965 ORTHO05D000842 7.3e-07 57.8 87 36.8
BcaB02g10940 Brassica carinata HOM05D000965 ORTHO05D000842 9.6e-07 57.4 69 44.9
BcaC08g44061 Brassica carinata HOM05D000965 ORTHO05D000842 9.6e-07 57.4 69 44.9
A05p18480 Brassica napus HOM05D000965 ORTHO05D000842 9.6e-07 57.4 69 44.9
A08p01750 Brassica napus HOM05D000965 ORTHO05D000842 9.6e-07 57.4 69 44.9
BolC6t36638H Brassica oleracea HOM05D000965 ORTHO05D000842 9.6e-07 57.4 69 44.9
BraA05t20740Z Brassica rapa HOM05D000965 ORTHO05D000842 9.6e-07 57.4 69 44.9
BraA08t32227Z Brassica rapa HOM05D000965 ORTHO05D000842 9.6e-07 57.4 69 44.9
CSS0002036 Camellia sinensis var. sinensis HOM05D000965 ORTHO05D000842 9.6e-07 57.4 71 46.5
PGR042G0068 Punica granatum HOM05D000965 ORTHO05D000842 9.6e-07 57.4 83 37.3
THA.LOC104798750 Tarenaya hassleriana HOM05D000965 ORTHO05D000842 9.6e-07 57.4 69 49.3
ECA234G0892 Erigeron canadensis HOM05D000965 ORTHO05D000842 1.3e-06 57.0 71 45.1
HanXRQChr17g0545001 Helianthus annuus HOM05D000965 ORTHO05D000842 1.3e-06 57.0 71 47.9
Lsat_1_v5_gn_7_103000 Lactuca sativa HOM05D000965 ORTHO05D000842 1.3e-06 57.0 71 46.5
Nitab4.5_0005445g0010 Nicotiana tabacum HOM05D000965 ORTHO05D000842 1.3e-06 57.0 71 42.3
Peaxi162Scf00069g01928 Petunia axillaris HOM05D000965 ORTHO05D000842 1.3e-06 57.0 73 39.7
BcaB07g33346 Brassica carinata HOM05D000965 ORTHO05D000842 1.6e-06 56.6 69 44.9
CAN.G162.25 Capsicum annuum HOM05D000965 ORTHO05D000842 1.6e-06 56.6 69 43.5
AT1G53210 Arabidopsis thaliana HOM05D000965 ORTHO05D000842 2.1e-06 56.2 69 47.8
BcaC08g43512 Brassica carinata HOM05D000965 ORTHO05D000842 2.1e-06 56.2 69 44.9
A06p01120 Brassica napus HOM05D000965 ORTHO05D000842 2.1e-06 56.2 69 44.9
C06p09000 Brassica napus HOM05D000965 ORTHO05D000842 2.1e-06 56.2 69 44.9
BolC6t35978H Brassica oleracea HOM05D000965 ORTHO05D000842 2.1e-06 56.2 69 44.9
BraA06t23339Z Brassica rapa HOM05D000965 ORTHO05D000842 2.1e-06 56.2 69 44.9
CiPaw.11G164000 Carya illinoinensis HOM05D000965 ORTHO05D000842 2.1e-06 56.2 76 42.1
Nn1g04327 Nelumbo nucifera HOM05D000965 ORTHO05D000842 2.1e-06 56.2 55 45.5
Atru.chr2.770 Acer truncatum HOM05D000965 ORTHO05D000842 2.8e-06 55.8 87 36.8
CSS0017134 Camellia sinensis var. sinensis HOM05D000965 ORTHO05D000842 2.8e-06 55.8 79 46.8
Lsat_1_v5_gn_5_129040 Lactuca sativa HOM05D000965 ORTHO05D000842 2.8e-06 55.8 69 44.9
Nitab4.5_0003077g0010 Nicotiana tabacum HOM05D000965 ORTHO05D000842 2.8e-06 55.8 71 42.3
MSTRG.14948 Avicennia marina HOM05D000965 ORTHO05D000842 3.6e-06 55.5 66 45.5
C06p14600 Brassica napus HOM05D000965 ORTHO05D000842 3.6e-06 55.5 69 43.5
Lj8C104T6 Lonicera japonica HOM05D000965 ORTHO05D000842 3.6e-06 55.5 68 39.7
Sp1g39790 Schrenkiella parvula HOM05D000965 ORTHO05D000842 3.6e-06 55.5 69 44.9
Zm00001eb246500 Zea mays HOM05D000965 ORTHO05D000842 3.6e-06 55.5 66 40.9
BcaB04g17104 Brassica carinata HOM05D000965 ORTHO05D000842 4.8e-06 55.1 68 41.2
Carub.0001s4240 Capsella rubella HOM05D000965 ORTHO05D000842 4.8e-06 55.1 69 44.9
FAN02G0846 Fragaria x ananassa HOM05D000965 ORTHO05D000842 4.8e-06 55.1 46 58.7
FAN05G0729 Fragaria x ananassa HOM05D000965 ORTHO05D000842 4.8e-06 55.1 46 58.7
HanXRQChr10g0304751 Helianthus annuus HOM05D000965 ORTHO05D000842 4.8e-06 55.1 71 40.8
MD10G1284900 Malus domestica HOM05D000965 ORTHO05D000842 4.8e-06 55.1 71 42.3
Zm00001eb338370 Zea mays HOM05D000965 ORTHO05D000842 4.8e-06 55.1 66 40.9


User provided reference genes

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