Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0061 Trochodendron aralioides HOM05D005059 ORTHO05D004248 5.5e-78 294.3 152 100.0
TAR627G0439 Trochodendron aralioides HOM05D005059 ORTHO05D004248 3.6e-29 132.1 85 89.4
TAR624G0872 Trochodendron aralioides HOM05D005059 ORTHO05D004248 4.4e-19 98.6 85 69.4
TAR626G0600 Trochodendron aralioides HOM05D005059 ORTHO05D004248 1.7e-18 96.7 85 67.1
TAR624G0770 Trochodendron aralioides HOM05D005059 ORTHO05D004248 6.3e-18 94.7 85 67.1
TAR629G2882 Trochodendron aralioides HOM05D005059 ORTHO05D004248 7.0e-17 91.3 85 62.4
Aqoxy4G00224 Aquilegia oxysepala HOM05D005059 ORTHO05D004248 1.7e-15 86.7 82 58.5
Nn6g34461 Nelumbo nucifera HOM05D005059 ORTHO05D004248 2.9e-15 85.9 85 58.8
Dinv18371 Davidia involucrata HOM05D000126 ORTHO05D000085 4.7e-13 78.6 84 60.7
Nn3g21078 Nelumbo nucifera HOM05D005059 ORTHO05D004248 1.8e-12 76.6 86 53.5
Dinv15004 Davidia involucrata HOM05D005059 ORTHO05D004248 1.2e-11 73.9 64 67.2
Haze_06169 Corylus avellana HOM05D005059 ORTHO05D004248 2.0e-11 73.2 87 54.0
Dinv32337 Davidia involucrata HOM05D005059 ORTHO05D004248 4.4e-11 72.0 88 48.9
Thecc.06G165400 Theobroma cacao HOM05D005059 ORTHO05D004248 1.3e-10 70.5 85 50.6
CiPaw.09G073100 Carya illinoinensis HOM05D005059 ORTHO05D004248 6.4e-10 68.2 86 46.5
Hma1.2p1_1016F.1_g248040 Hydrangea macrophylla HOM05D005059 ORTHO05D004248 1.4e-09 67.0 85 50.6
Hma1.2p1_0113F.1_g055120 Hydrangea macrophylla HOM05D005059 ORTHO05D004248 2.4e-09 66.2 81 49.4
QL05p049931 Quercus lobata HOM05D005059 ORTHO05D004248 2.4e-09 66.2 84 45.2
Glyma.08G118500 Glycine max HOM05D005059 ORTHO05D004248 4.1e-09 65.5 84 51.2
MBI06_g16696_MAGBIO Magnolia biondii HOM05D005059 ORTHO05D004248 5.4e-09 65.1 85 49.4
Gohir.D05G156000 Gossypium hirsutum HOM05D005059 ORTHO05D004248 7.0e-09 64.7 87 48.3
Gorai.009G160500 Gossypium raimondii HOM05D005059 ORTHO05D004248 7.0e-09 64.7 87 48.3
Cfa000656 Carpinus fangiana HOM05D005059 ORTHO05D004248 1.6e-08 63.5 89 50.6
Gohir.A05G153400 Gossypium hirsutum HOM05D005059 ORTHO05D004248 1.6e-08 63.5 87 48.3
Potri.004G061300 Populus trichocarpa HOM05D005059 ORTHO05D004248 1.6e-08 63.5 96 45.8
Rhsim04G0027000 Rhododendron simsii HOM05D002453 ORTHO05D008746 5.9e-08 61.6 71 46.5
Atru.chr10.1568 Acer truncatum HOM05D005059 ORTHO05D004248 7.8e-08 61.2 86 51.2
Phvul.002G241108 Phaseolus vulgaris HOM05D005059 ORTHO05D004248 7.8e-08 61.2 85 49.4
Rhsim13G0187800 Rhododendron simsii HOM05D005059 ORTHO05D004248 7.8e-08 61.2 87 47.1
COL.COLO4_31233 Corchorus olitorius HOM05D005059 ORTHO05D004248 1.0e-07 60.8 90 46.7
Glyma.05G161100 Glycine max HOM05D005059 ORTHO05D004248 1.3e-07 60.5 85 49.4
Oeu060173.1 Olea europaea HOM05D005059 ORTHO05D004248 1.3e-07 60.5 86 44.2
Rhsim13G0187700 Rhododendron simsii HOM05D005059 ORTHO05D004248 1.3e-07 60.5 86 51.2
Ciclev10018148m.g Citrus clementina HOM05D005059 ORTHO05D004248 2.3e-07 59.7 89 50.6
Eucgr.D00466 Eucalyptus grandis HOM05D005059 ORTHO05D004248 2.3e-07 59.7 89 48.3
MD10G1275500 Malus domestica HOM05D005059 ORTHO05D004248 3.0e-07 59.3 78 46.2
Oeu043118.1 Olea europaea HOM05D005059 ORTHO05D004248 3.0e-07 59.3 86 43.0
CSS0004272 Camellia sinensis var. sinensis HOM05D005059 ORTHO05D004248 5.0e-07 58.5 87 43.7
CAN.G411.50 Capsicum annuum HOM05D005059 ORTHO05D004248 6.6e-07 58.2 80 46.2
Medtr8g087390 Medicago truncatula HOM05D005059 ORTHO05D004248 6.6e-07 58.2 89 44.9
SalBow7G3765 Salvia bowleyana HOM05D005059 ORTHO05D004248 6.6e-07 58.2 86 40.7
FAN11G2282 Fragaria x ananassa HOM05D005059 ORTHO05D004248 8.6e-07 57.8 90 44.4
Prupe.4G067000 Prunus persica HOM05D005059 ORTHO05D004248 8.6e-07 57.8 86 44.2
FvH4_3g07300 Fragaria vesca HOM05D005059 ORTHO05D004248 1.1e-06 57.4 90 44.4
Thecc.07G128200 Theobroma cacao HOM05D008890 ORTHO05D004248 1.1e-06 57.4 86 46.5
Manes.16G042800 Manihot esculenta HOM05D005059 ORTHO05D004248 1.9e-06 56.6 89 47.2
Sopen02g021130 Solanum pennellii HOM05D005059 ORTHO05D004248 1.9e-06 56.6 76 46.1
FAN21G0043 Fragaria x ananassa HOM05D005059 ORTHO05D004248 2.5e-06 56.2 90 44.4
FAN25G1124 Fragaria x ananassa HOM05D005059 ORTHO05D004248 2.5e-06 56.2 90 44.4
Oeu060178.1 Olea europaea HOM05D005059 ORTHO05D004248 2.5e-06 56.2 86 40.7
PGR042G3020 Punica granatum HOM05D005059 ORTHO05D004248 2.5e-06 56.2 85 48.2
RcHm_v2.0_Chr5g0011661 Rosa chinensis HOM05D005059 ORTHO05D004248 2.5e-06 56.2 90 42.2
Sabra04G0040600 Salix brachista HOM05D005059 ORTHO05D004248 2.5e-06 56.2 94 44.7
CSS0038855 Camellia sinensis var. sinensis HOM05D005059 ORTHO05D004248 3.3e-06 55.8 86 43.0
Dinv12752 Davidia involucrata HOM05D005059 ORTHO05D004248 3.3e-06 55.8 56 51.8
PGSC0003DMG400028485 Solanum tuberosum HOM05D005059 ORTHO05D004248 3.3e-06 55.8 80 47.5
Ca_17896_v3 Cicer arietinum L. HOM05D005059 ORTHO05D004248 4.3e-06 55.5 84 41.7
FAN16G0464 Fragaria x ananassa HOM05D005059 ORTHO05D004248 5.6e-06 55.1 90 43.3
Thecc.07G128300 Theobroma cacao HOM05D008890 ORTHO05D004248 5.6e-06 55.1 85 43.5
Oeu040922.1 Olea europaea HOM05D005059 ORTHO05D004248 7.3e-06 54.7 83 42.2
CiPaw.10G061800 Carya illinoinensis HOM05D005059 ORTHO05D004248 9.5e-06 54.3 87 42.5


User provided reference genes

Program Settings