Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0042 Trochodendron aralioides HOM05D005273 ORTHO05D006195 5.9e-233 810.4 396 100.0
Nn1g06518 Nelumbo nucifera HOM05D005273 ORTHO05D006195 2.4e-178 629.0 392 79.3
QL08p039365 Quercus lobata HOM05D005273 ORTHO05D006195 1.4e-173 613.2 392 76.8
GSVIVG01020564001 Vitis vinifera HOM05D005273 ORTHO05D006195 3.4e-172 608.6 362 82.6
CSS0011944 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 5.8e-172 607.8 393 75.8
CSS0048709 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 5.8e-172 607.8 393 75.8
FvH4_6g26410 Fragaria vesca HOM05D005273 ORTHO05D006195 7.6e-172 607.4 392 76.5
Hma1.2p1_0002F.1_g002020 Hydrangea macrophylla HOM05D005273 ORTHO05D006195 2.2e-171 605.9 376 79.0
Nn1g04120 Nelumbo nucifera HOM05D005273 ORTHO05D006195 2.2e-171 605.9 362 82.9
RcHm_v2.0_Chr2g0127911 Rosa chinensis HOM05D005273 ORTHO05D006195 1.0e-168 597.0 393 75.1
CDE08G0645 Ceratophyllum demersum HOM05D005273 ORTHO05D006195 6.6e-168 594.3 393 74.6
Duzib264G0403 Durio zibethinus HOM05D005273 ORTHO05D006195 1.1e-167 593.6 388 75.8
Gohir.A11G060000 Gossypium hirsutum HOM05D005273 ORTHO05D006195 1.1e-167 593.6 388 75.5
Sabra07G0113000 Salix brachista HOM05D005273 ORTHO05D006195 1.9e-167 592.8 391 75.7
Atru.chr6.2972 Acer truncatum HOM05D005273 ORTHO05D006195 3.3e-167 592.0 392 74.0
Gorai.007G069300 Gossypium raimondii HOM05D005273 ORTHO05D006195 3.3e-167 592.0 388 74.7
Aqoxy6G00048 Aquilegia oxysepala HOM05D005273 ORTHO05D006195 4.3e-167 591.7 386 76.2
CANSAT64G2205 Cannabis sativa HOM05D005273 ORTHO05D006195 5.6e-167 591.3 392 75.0
PSO782G4868 Papaver somniferum HOM05D005273 ORTHO05D006195 7.3e-167 590.9 382 77.2
Duzib147G0196 Durio zibethinus HOM05D005273 ORTHO05D006195 1.3e-166 590.1 378 76.7
PSO478G2492 Papaver somniferum HOM05D005273 ORTHO05D006195 1.3e-166 590.1 384 76.6
Migut.D02068 Erythranthe guttata HOM05D005273 ORTHO05D006195 2.1e-166 589.3 404 72.8
MD09G1233100 Malus domestica HOM05D005273 ORTHO05D006195 4.8e-166 588.2 392 73.5
Prupe.3G131200 Prunus persica HOM05D005273 ORTHO05D006195 4.8e-166 588.2 392 73.7
FAN05G3218 Fragaria x ananassa HOM05D005273 ORTHO05D006195 6.2e-166 587.8 361 79.8
Sc21g0002980 Simmondsia chinensis HOM05D005273 ORTHO05D006195 8.1e-166 587.4 392 73.0
TWI59G0041 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 1.1e-165 587.0 392 74.2
MSTRG.21306 Avicennia marina HOM05D005273 ORTHO05D006195 2.4e-165 585.9 392 73.7
COL.COLO4_33584 Corchorus olitorius HOM05D005273 ORTHO05D006195 1.5e-164 583.2 378 75.1
Solyc02g072105.1 Solanum lycopersicum HOM05D005273 ORTHO05D006195 1.5e-164 583.2 392 72.4
Ciclev10015816m.g Citrus clementina HOM05D005273 ORTHO05D006195 3.4e-164 582.0 361 79.2
Sabra07G0117800 Salix brachista HOM05D005273 ORTHO05D006195 9.9e-164 580.5 408 72.3
Eucgr.K01040 Eucalyptus grandis HOM05D005273 ORTHO05D006195 2.2e-163 579.3 391 73.1
Manes.02G045100 Manihot esculenta HOM05D005273 ORTHO05D006195 2.2e-163 579.3 361 77.8
Potri.007G139700 Populus trichocarpa HOM05D005273 ORTHO05D006195 2.9e-163 578.9 362 78.2
HanXRQChr15g0466031 Helianthus annuus HOM05D005273 ORTHO05D006195 3.8e-163 578.6 391 72.6
Gohir.D11G064100 Gossypium hirsutum HOM05D005273 ORTHO05D006195 1.4e-162 576.6 360 78.1
arahy.Tifrunner.gnm1.ann1.EEV1KR Arachis hypogaea HOM05D005273 ORTHO05D006195 3.2e-162 575.5 376 74.5
ClCG10G015250 Citrullus lanatus HOM05D005273 ORTHO05D006195 3.2e-162 575.5 391 72.4
Carub.0007s1834 Capsella rubella HOM05D005273 ORTHO05D006195 5.4e-162 574.7 395 71.4
Sopen02g021070 Solanum pennellii HOM05D005273 ORTHO05D006195 7.1e-162 574.3 361 77.0
arahy.Tifrunner.gnm1.ann1.RDE8QD Arachis hypogaea HOM05D005273 ORTHO05D006195 9.3e-162 573.9 376 74.2
A03p53890 Brassica napus HOM05D005273 ORTHO05D006195 1.2e-161 573.5 395 71.9
Haze_12807 Corylus avellana HOM05D005273 ORTHO05D006195 3.5e-161 572.0 375 76.0
PGR142G4354 Punica granatum HOM05D005273 ORTHO05D006195 3.5e-161 572.0 362 76.8
AL7G30590 Arabidopsis lyrata HOM05D005273 ORTHO05D006195 6.0e-161 571.2 394 71.3
Cc06_g20460 Coffea canephora HOM05D005273 ORTHO05D006195 6.0e-161 571.2 384 73.4
BraA03t14458Z Brassica rapa HOM05D005273 ORTHO05D006195 7.9e-161 570.9 398 71.4
arahy.Tifrunner.gnm1.ann1.891C6J Arachis hypogaea HOM05D005273 ORTHO05D006195 1.8e-160 569.7 376 73.9
CANSAT64G2383 Cannabis sativa HOM05D005273 ORTHO05D006195 1.8e-160 569.7 361 77.3
PGSC0003DMG400028417 Solanum tuberosum HOM05D005273 ORTHO05D006195 3.9e-160 568.5 361 75.9
CAN.G411.45 Capsicum annuum HOM05D005273 ORTHO05D006195 6.7e-160 567.8 368 75.3
DCAR_013064 Daucus carota HOM05D005273 ORTHO05D006195 6.7e-160 567.8 362 74.0
CiPaw.04G127500 Carya illinoinensis HOM05D005273 ORTHO05D006195 8.7e-160 567.4 366 76.8
BolC7t45723H Brassica oleracea HOM05D005273 ORTHO05D006195 1.5e-159 566.6 396 71.2
SalBow1G7481 Salvia bowleyana HOM05D005273 ORTHO05D006195 1.5e-159 566.6 379 73.6
Carub.0001s3611 Capsella rubella HOM05D005273 ORTHO05D006195 2.5e-159 565.8 394 70.3
Sed0018091 Sechium edule HOM05D005273 ORTHO05D006195 4.3e-159 565.1 374 74.1
ATR0737G119 Amborella trichopoda HOM05D005273 ORTHO05D006195 5.6e-159 564.7 361 77.3
BcaNung01659 Brassica carinata HOM05D005273 ORTHO05D006195 1.3e-158 563.5 397 70.5
CARHR229970 Cardamine hirsuta HOM05D005273 ORTHO05D006195 1.3e-158 563.5 379 72.0
C07p52300 Brassica napus HOM05D005273 ORTHO05D006195 2.8e-158 562.4 396 70.7
Glyma.12G114500 Glycine max HOM05D005273 ORTHO05D006195 2.8e-158 562.4 359 76.3
CsaV3_3G041260 Cucumis sativus L. HOM05D005273 ORTHO05D006195 3.7e-158 562.0 374 74.1
ECA246G2010 Erigeron canadensis HOM05D005273 ORTHO05D006195 3.7e-158 562.0 361 75.6
Lsat_1_v5_gn_4_66761 Lactuca sativa HOM05D005273 ORTHO05D006195 3.7e-158 562.0 361 75.3
SalBow1G1167 Salvia bowleyana HOM05D005273 ORTHO05D006195 6.2e-158 561.2 361 76.2
A01p14180 Brassica napus HOM05D005273 ORTHO05D006195 8.1e-158 560.8 392 70.4
Thhalv10025474m.g Eutrema salsugineum HOM05D005273 ORTHO05D006195 1.1e-157 560.5 360 76.1
Aa31LG2G13370 Aethionema arabicum HOM05D005273 ORTHO05D006195 2.4e-157 559.3 394 68.8
Hund09652 Selenicereus undatus HOM05D005273 ORTHO05D006195 5.3e-157 558.1 392 70.4
VMungo1127G0137 Vigna mungo HOM05D005273 ORTHO05D006195 6.9e-157 557.8 362 74.9
AT4G22930 Arabidopsis thaliana HOM05D005273 ORTHO05D006195 9.0e-157 557.4 394 70.1
Sp7g21020 Schrenkiella parvula HOM05D005273 ORTHO05D006195 9.0e-157 557.4 360 75.6
SGA_v2.0_scaffold25G10971 Striga asiatica HOM05D005273 ORTHO05D006195 9.0e-157 557.4 403 69.2
BraA01t01367Z Brassica rapa HOM05D005273 ORTHO05D006195 2.0e-156 556.2 369 73.2
THA.LOC104823543 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 3.4e-156 555.4 365 74.8
Phvul.011G119600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 4.5e-156 555.1 358 75.7
MELO3C009854.2 Cucumis melo HOM05D005273 ORTHO05D006195 1.3e-155 553.5 383 72.1
Lalb_Chr03g0027211 Lupinus albus HOM05D005273 ORTHO05D006195 2.2e-155 552.7 358 74.6
arahy.Tifrunner.gnm1.ann1.YR7R6W Arachis hypogaea HOM05D005273 ORTHO05D006195 2.9e-155 552.4 354 75.7
Ah.11g045620 Amaranthus hybridus HOM05D005273 ORTHO05D006195 6.4e-155 551.2 361 74.8
unitig_899.g15313 Utricularia gibba HOM05D005273 ORTHO05D006195 6.4e-155 551.2 367 74.1
Ca_18943_v3 Cicer arietinum L. HOM05D005273 ORTHO05D006195 8.4e-155 550.8 358 74.3
Phvul.010G107600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 1.1e-154 550.4 358 75.4
AUR62012902 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.9e-154 549.7 362 73.5
Lj3g0011026 Lotus japonicus HOM05D005273 ORTHO05D006195 2.4e-154 549.3 358 74.6
Zm00001eb153030 Zea mays HOM05D005273 ORTHO05D006195 4.2e-154 548.5 360 74.2
AUR62011776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.2e-153 547.0 428 65.9
Os01g0747500 Oryza sativa ssp. japonica HOM05D005273 ORTHO05D006195 1.6e-153 546.6 360 72.8
Glyma.06G291600 Glycine max HOM05D005273 ORTHO05D006195 1.3e-152 543.5 358 73.5
Medtr4g078370 Medicago truncatula HOM05D005273 ORTHO05D006195 1.3e-152 543.5 358 73.5
vmacro12316 Vaccinium macrocarpon HOM05D005273 ORTHO05D006195 2.3e-152 542.7 457 61.9
EL10Ac3g07435 Beta vulgaris HOM05D005273 ORTHO05D006195 3.9e-152 542.0 375 72.5
Psat7g169200 Pisum sativum HOM05D005273 ORTHO05D006195 3.9e-152 542.0 358 73.5
THA.LOC104814179 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 1.9e-151 539.7 358 73.5
HPP92_004898 Vanilla planifolia HOM05D005273 ORTHO05D006195 2.1e-150 536.2 361 73.7
Dinv04937 Davidia involucrata HOM05D005273 ORTHO05D006195 3.7e-150 535.4 379 71.2
TWI18G0085 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 4.0e-149 531.9 361 74.5
Rhsim06G0140600 Rhododendron simsii HOM05D005273 ORTHO05D006195 6.9e-149 531.2 499 56.5
MBI07_g30188_MAGBIO Magnolia biondii HOM05D005273 ORTHO05D006195 3.9e-144 515.4 393 67.4
SHI10390 Sapria himalayana HOM05D005273 ORTHO05D006195 2.4e-141 506.1 374 66.0
C01p17440 Brassica napus HOM05D000022 ORTHO05D006195 2.6e-140 502.7 375 67.7
BcaC09g51057 Brassica carinata HOM05D000022 ORTHO05D006195 1.3e-139 500.4 403 63.0
Lj5g0005541 Lotus japonicus HOM05D005273 ORTHO05D006195 7.9e-137 491.1 321 74.8
Cpa.g.sc83.46 Carica papaya HOM05D005273 ORTHO05D006195 6.7e-136 488.0 372 66.4
SMO347G0496 Selaginella moellendorffii HOM05D005273 ORTHO05D006195 2.5e-135 486.1 358 67.3
Pp3c13_8930 Physcomitrium patens HOM05D005273 ORTHO05D006195 3.4e-132 475.7 357 65.8
Mapoly0001s0029 Marchantia polymorpha HOM05D005273 ORTHO05D006195 1.3e-131 473.8 356 65.7
Thecc.01G150900 Theobroma cacao HOM05D005273 ORTHO05D006195 3.1e-125 452.6 287 78.4
Cfa014627 Carpinus fangiana HOM05D005273 ORTHO05D006195 1.1e-119 434.1 404 58.4
CBR_g21229 Chara braunii HOM05D005273 ORTHO05D006195 1.5e-119 433.7 346 61.6
AUR62011723 Chenopodium quinoa HOM05D005273 ORTHO05D006195 8.0e-113 411.4 276 71.7
AUR62024621 Chenopodium quinoa HOM05D005273 ORTHO05D006195 2.3e-112 409.8 272 74.6
CSS0013056 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 1.2e-111 407.5 380 57.6
Thecc.K0007100 Theobroma cacao HOM05D005273 ORTHO05D006195 3.3e-111 406.0 228 86.0
Cre11.g467550 Chlamydomonas reinhardtii HOM05D005273 ORTHO05D006195 5.7e-111 405.2 356 57.6
Nitab4.5_0000437g0040 Nicotiana tabacum HOM05D005273 ORTHO05D006195 2.2e-110 403.3 329 63.8
Nitab4.5_0006070g0020 Nicotiana tabacum HOM05D005273 ORTHO05D006195 1.1e-109 401.0 329 63.2
CSS0022573 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 1.0e-99 367.9 375 54.4
MCO16G183 Micromonas commoda HOM05D005273 ORTHO05D006195 2.9e-99 366.3 357 52.1
BolC1t01684H Brassica oleracea HOM05D005273 ORTHO05D006195 8.6e-99 364.8 249 70.3
FAN02G4311 Fragaria x ananassa HOM05D005273 ORTHO05D006195 8.0e-97 358.2 220 80.5
QL08p039454 Quercus lobata HOM05D005273 ORTHO05D006195 8.0e-97 358.2 254 72.0
PRCOL_00003989 Prasinoderma coloniale HOM05D005273 ORTHO05D006195 4.4e-95 352.4 373 49.9
AagrBONN_evm.TU.Sc2ySwM_117.50 Anthoceros agrestis HOM05D005273 ORTHO05D006195 1.3e-94 350.9 227 75.3
Lj1C718T2 Lonicera japonica HOM05D005273 ORTHO05D006195 1.3e-91 340.9 190 85.8
Haze_27262 Corylus avellana HOM05D005273 ORTHO05D006195 2.0e-87 327.0 356 48.9
Actinidia11084 Actinidia chinensis HOM05D005273 ORTHO05D006195 2.7e-68 263.5 191 67.5
Peaxi162Scf00112g00113 Petunia axillaris HOM05D005273 ORTHO05D006195 2.4e-64 250.4 158 78.5
SEGI_10566 Sequoiadendron giganteum HOM05D005273 ORTHO05D006195 2.4e-64 250.4 156 76.3
Atru.chr6.2977 Acer truncatum HOM05D005273 ORTHO05D006195 8.9e-64 248.4 236 57.6
Oeu007130.1 Olea europaea HOM05D005273 ORTHO05D006195 5.6e-50 202.6 362 36.7
Atru.chr6.2976 Acer truncatum HOM05D005273 ORTHO05D006195 4.3e-42 176.4 99 84.8
EL10Ac9g21222 Beta vulgaris HOM05D005273 ORTHO05D006195 8.1e-41 172.2 248 44.4
TPR.G7356 Trifolium pratense HOM05D005273 ORTHO05D006195 1.1e-40 171.8 94 85.1
Peaxi162Scf00112g00110 Petunia axillaris HOM05D005273 ORTHO05D006195 1.2e-39 168.3 132 62.1
Lj1A718G26 Lonicera japonica HOM05D005273 ORTHO05D006195 7.6e-39 165.6 131 62.6
Cfa022577 Carpinus fangiana HOM05D005273 ORTHO05D006195 6.0e-36 156.0 370 31.6
Lj3g0005703 Lotus japonicus HOM05D002777 ORTHO05D001516 9.0e-24 115.5 81 72.8
AUR62036776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 5.0e-22 109.8 169 43.8
Lalb_Chr09g0333161 Lupinus albus HOM05D005273 ORTHO05D006195 2.5e-18 97.4 87 58.6
BcaNung01011 Brassica carinata HOM05D005273 ORTHO05D006195 1.0e-14 85.5 67 73.1
AUR62041872 Chenopodium quinoa HOM05D005273 ORTHO05D006195 6.5e-14 82.8 77 54.5
TPR.G31736 Trifolium pratense HOM05D005273 ORTHO05D006195 2.5e-13 80.9 45 84.4
Lj5A796T26 Lonicera japonica HOM05D005273 ORTHO05D006195 8.8e-11 72.4 41 73.2


User provided reference genes

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