Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G1971 Trochodendron aralioides HOM05D005904 ORTHO05D007074 3.8e-143 511.5 264 100.0
TAR383G0617 Trochodendron aralioides HOM05D005904 ORTHO05D007074 2.7e-93 345.9 236 77.5
Nn6g35465 Nelumbo nucifera HOM05D005904 ORTHO05D007074 7.7e-80 301.2 237 69.6
CANSAT56G1468 Cannabis sativa HOM05D005904 ORTHO05D007074 1.5e-70 270.4 227 62.6
Dinv30384 Davidia involucrata HOM05D005904 ORTHO05D007074 1.5e-70 270.4 237 64.6
GSVIVG01016848001 Vitis vinifera HOM05D005904 ORTHO05D007074 3.3e-70 269.2 235 62.6
QL05p012810 Quercus lobata HOM05D005904 ORTHO05D007074 5.6e-70 268.5 232 63.4
ECA234G0674 Erigeron canadensis HOM05D005904 ORTHO05D007074 2.1e-69 266.5 226 62.4
HanXRQChr10g0310911 Helianthus annuus HOM05D005904 ORTHO05D007074 3.6e-69 265.8 232 62.1
PSO210G1067 Papaver somniferum HOM05D005904 ORTHO05D007074 1.0e-68 264.2 227 63.4
CSS0014810 Camellia sinensis var. sinensis HOM05D005904 ORTHO05D007074 1.8e-68 263.5 232 62.9
MELO3C013052.2 Cucumis melo HOM05D005904 ORTHO05D007074 1.8e-68 263.5 241 61.4
Thecc.06G110900 Theobroma cacao HOM05D005904 ORTHO05D007074 1.8e-68 263.5 229 61.1
CsaV3_3G043900 Cucumis sativus L. HOM05D005904 ORTHO05D007074 1.5e-67 260.4 245 60.4
Gohir.A10G060500 Gossypium hirsutum HOM05D005904 ORTHO05D007074 3.4e-67 259.2 229 60.3
ClCG07G013710 Citrullus lanatus HOM05D005904 ORTHO05D007074 5.8e-67 258.5 238 60.1
Lsat_1_v5_gn_5_134821 Lactuca sativa HOM05D005904 ORTHO05D007074 7.5e-67 258.1 229 61.6
Gorai.011G065700 Gossypium raimondii HOM05D005904 ORTHO05D007074 1.3e-66 257.3 229 59.8
CDE06G0040 Ceratophyllum demersum HOM05D005904 ORTHO05D007074 2.2e-66 256.5 230 60.0
Aqoxy7G04049 Aquilegia oxysepala HOM05D005904 ORTHO05D007074 2.9e-66 256.1 221 66.1
Sed0023540 Sechium edule HOM05D005904 ORTHO05D007074 2.9e-66 256.1 234 60.7
PSO210G2600 Papaver somniferum HOM05D005904 ORTHO05D007074 6.4e-66 255.0 209 66.0
Cc07_g04610 Coffea canephora HOM05D005904 ORTHO05D007074 8.3e-66 254.6 248 58.9
Gohir.D10G061500 Gossypium hirsutum HOM05D005904 ORTHO05D007074 1.4e-65 253.8 229 59.4
Duzib235G0974 Durio zibethinus HOM05D005904 ORTHO05D007074 3.2e-65 252.7 227 58.1
CiPaw.02G140600 Carya illinoinensis HOM05D005904 ORTHO05D007074 4.1e-65 252.3 228 61.4
Actinidia21754 Actinidia chinensis HOM05D005904 ORTHO05D007074 7.0e-65 251.5 215 63.3
TWI31G1228 Tripterygium wilfordii HOM05D005904 ORTHO05D007074 1.2e-64 250.8 227 60.4
Sabra01G0156900 Salix brachista HOM05D005904 ORTHO05D007074 2.0e-64 250.0 228 63.6
Eucgr.F03129 Eucalyptus grandis HOM05D005904 ORTHO05D007074 2.7e-64 249.6 243 57.2
PGR044G1952 Punica granatum HOM05D005904 ORTHO05D007074 3.5e-64 249.2 228 58.8
Cpa.g.sc25.58 Carica papaya HOM05D005904 ORTHO05D007074 4.6e-64 248.8 220 61.4
Manes.04G139100 Manihot esculenta HOM05D005904 ORTHO05D007074 6.0e-64 248.4 227 62.1
Potri.001G200300 Populus trichocarpa HOM05D005904 ORTHO05D007074 6.0e-64 248.4 231 61.5
Aa31LG10G930 Aethionema arabicum HOM05D005904 ORTHO05D007074 1.7e-63 246.9 232 58.6
Prupe.3G050600 Prunus persica HOM05D005904 ORTHO05D007074 1.7e-63 246.9 255 58.4
Rhsim08G0232900 Rhododendron simsii HOM05D005904 ORTHO05D007074 3.9e-63 245.7 225 62.2
Solyc03g121530.3 Solanum lycopersicum HOM05D005904 ORTHO05D007074 3.9e-63 245.7 230 57.4
MD09G1194100 Malus domestica HOM05D005904 ORTHO05D007074 6.6e-63 245.0 247 56.3
Glyma.15G023700 Glycine max HOM05D005904 ORTHO05D007074 1.9e-62 243.4 220 61.4
Lj5A45T77 Lonicera japonica HOM05D005904 ORTHO05D007074 4.3e-62 242.3 217 59.4
arahy.Tifrunner.gnm1.ann1.LV1MMJ Arachis hypogaea HOM05D005904 ORTHO05D007074 5.6e-62 241.9 233 57.5
Peaxi162Scf00038g01518 Petunia axillaris HOM05D005904 ORTHO05D007074 7.3e-62 241.5 151 78.1
Hund18723 Selenicereus undatus HOM05D005904 ORTHO05D007074 9.5e-62 241.1 232 58.2
Nitab4.5_0001295g0010 Nicotiana tabacum HOM05D005904 ORTHO05D007074 1.6e-61 240.4 207 61.4
RcHm_v2.0_Chr6g0267021 Rosa chinensis HOM05D005904 ORTHO05D007074 2.1e-61 240.0 260 55.0
CAN.G1389.13 Capsicum annuum HOM05D005904 ORTHO05D007074 2.8e-61 239.6 215 60.0
Oeu039966.1 Olea europaea HOM05D005904 ORTHO05D007074 2.8e-61 239.6 153 74.5
Thhalv10011744m.g Eutrema salsugineum HOM05D005904 ORTHO05D007074 1.1e-60 237.7 244 54.1
Phvul.005G160100 Phaseolus vulgaris HOM05D005904 ORTHO05D007074 1.1e-60 237.7 232 56.0
FAN07G2466 Fragaria x ananassa HOM05D005904 ORTHO05D007074 1.4e-60 237.3 237 57.8
Medtr2g100220 Medicago truncatula HOM05D005904 ORTHO05D007074 1.8e-60 236.9 227 58.1
THA.LOC104810344 Tarenaya hassleriana HOM05D005904 ORTHO05D007074 1.8e-60 236.9 208 62.0
Migut.O00807 Erythranthe guttata HOM05D005904 ORTHO05D007074 3.1e-60 236.1 217 58.1
FvH4_4g12940 Fragaria vesca HOM05D005904 ORTHO05D007074 6.8e-60 235.0 237 57.4
Lj3g0018823 Lotus japonicus HOM05D005904 ORTHO05D007074 6.8e-60 235.0 227 57.3
VMungo1080G0888 Vigna mungo HOM05D005904 ORTHO05D007074 6.8e-60 235.0 227 56.4
C03p92270 Brassica napus HOM05D005904 ORTHO05D007074 8.9e-60 234.6 194 64.4
Lj9A518G85 Lonicera japonica HOM05D005904 ORTHO05D007074 1.2e-59 234.2 233 60.5
Lalb_Chr24g0396341 Lupinus albus HOM05D005904 ORTHO05D007074 1.2e-59 234.2 237 55.7
CARHR044740 Cardamine hirsuta HOM05D005904 ORTHO05D007074 2.0e-59 233.4 224 56.7
Sc12g0010220 Simmondsia chinensis HOM05D005904 ORTHO05D007074 2.0e-59 233.4 244 55.7
HPP92_003969 Vanilla planifolia HOM05D005904 ORTHO05D007074 2.6e-59 233.0 216 59.7
Aa31LG8G920 Aethionema arabicum HOM05D005904 ORTHO05D007074 5.8e-59 231.9 235 55.7
arahy.Tifrunner.gnm1.ann1.21ET8L Arachis hypogaea HOM05D005904 ORTHO05D007074 5.8e-59 231.9 235 54.9
A08p00940 Brassica napus HOM05D005904 ORTHO05D007074 5.8e-59 231.9 206 61.2
Carub.0001s4364 Capsella rubella HOM05D005904 ORTHO05D007074 5.8e-59 231.9 236 54.2
DCAR_022713 Daucus carota HOM05D005904 ORTHO05D007074 5.8e-59 231.9 215 61.4
BcaC01g01466 Brassica carinata HOM05D005904 ORTHO05D007074 7.5e-59 231.5 194 63.9
BolC3t21541H Brassica oleracea HOM05D005904 ORTHO05D007074 7.5e-59 231.5 194 63.9
AUR62038130 Chenopodium quinoa HOM05D005904 ORTHO05D007074 7.5e-59 231.5 228 58.3
MBI01_g01270_MAGBIO Magnolia biondii HOM05D005904 ORTHO05D007074 7.5e-59 231.5 152 77.6
Ah.08g216180 Amaranthus hybridus HOM05D005904 ORTHO05D007074 9.8e-59 231.1 250 53.6
BraA08t32149Z Brassica rapa HOM05D005904 ORTHO05D007074 2.2e-58 229.9 238 56.7
AUR62009818 Chenopodium quinoa HOM05D005904 ORTHO05D007074 2.2e-58 229.9 232 56.0
Sp3g11940 Schrenkiella parvula HOM05D005904 ORTHO05D007074 2.2e-58 229.9 223 57.8
AL3G25790 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 2.9e-58 229.6 222 56.8
EL10Ac7g15769 Beta vulgaris HOM05D005904 ORTHO05D007074 2.9e-58 229.6 163 70.6
A05p35680 Brassica napus HOM05D005904 ORTHO05D007074 2.9e-58 229.6 223 57.4
BraA05t22375Z Brassica rapa HOM05D005904 ORTHO05D007074 2.9e-58 229.6 223 57.4
Psat5g293640 Pisum sativum HOM05D005904 ORTHO05D007074 2.9e-58 229.6 224 58.5
BolC5t34074H Brassica oleracea HOM05D005904 ORTHO05D007074 3.7e-58 229.2 221 57.0
Sp1g40800 Schrenkiella parvula HOM05D005904 ORTHO05D007074 3.7e-58 229.2 235 54.0
Carub.0003s1326 Capsella rubella HOM05D005904 ORTHO05D007074 8.3e-58 228.0 224 55.8
BcaNung06385 Brassica carinata HOM05D005904 ORTHO05D007074 1.1e-57 227.6 221 57.0
C05p54090 Brassica napus HOM05D005904 ORTHO05D007074 1.1e-57 227.6 221 57.0
Thhalv10021279m.g Eutrema salsugineum HOM05D005904 ORTHO05D007074 1.1e-57 227.6 225 57.3
AL1G63140 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 1.9e-57 226.9 231 54.1
AT1G55140 Arabidopsis thaliana HOM05D005904 ORTHO05D007074 2.4e-57 226.5 220 57.3
MSTRG.22589 Avicennia marina HOM05D005904 ORTHO05D007074 5.4e-57 225.3 202 59.4
Os11g0237700 Oryza sativa ssp. japonica HOM05D005904 ORTHO05D007074 5.4e-57 225.3 167 64.7
BcaB06g25441 Brassica carinata HOM05D005904 ORTHO05D007074 7.1e-57 224.9 221 56.1
AT3G13740 Arabidopsis thaliana HOM05D005904 ORTHO05D007074 2.1e-56 223.4 220 54.5
Os05g0318300 Oryza sativa ssp. japonica HOM05D005904 ORTHO05D007074 2.1e-56 223.4 167 64.7
SalBow6G4349 Salvia bowleyana HOM05D005904 ORTHO05D007074 6.0e-56 221.9 244 54.5
FAN12G1666 Fragaria x ananassa HOM05D005904 ORTHO05D007074 7.8e-56 221.5 267 51.3
DCAR_016164 Daucus carota HOM05D001529 ORTHO05D003309 1.0e-55 221.1 260 50.4
Zm00001eb120860 Zea mays HOM05D005904 ORTHO05D007074 5.1e-55 218.8 231 51.9
BcaB04g16991 Brassica carinata HOM05D005904 ORTHO05D007074 1.9e-54 216.9 232 53.0
COL.COLO4_30653 Corchorus olitorius HOM05D005904 ORTHO05D007074 2.1e-53 213.4 203 57.1
Nn8g38876 Nelumbo nucifera HOM05D005904 ORTHO05D007074 3.6e-53 212.6 145 73.8
Atru.chr1.3688 Acer truncatum HOM05D005904 ORTHO05D007074 5.8e-51 205.3 232 51.7
SGA_v2.0_scaffold45G16976 Striga asiatica HOM05D005904 ORTHO05D007074 9.9e-51 204.5 201 58.2
Ciclev10026243m.g Citrus clementina HOM05D005904 ORTHO05D007074 1.3e-50 204.1 213 58.2
unitig_0.g2872 Utricularia gibba HOM05D005904 ORTHO05D007074 5.4e-49 198.7 136 69.1
vmacro18789 Vaccinium macrocarpon HOM05D005904 ORTHO05D007074 2.8e-45 186.4 232 50.0
Mapoly0003s0025 Marchantia polymorpha HOM05D005904 ORTHO05D007074 6.8e-44 181.8 173 53.2
AagrBONN_evm.TU.Sc2ySwM_344.3620 Anthoceros agrestis HOM05D005904 ORTHO05D007074 5.8e-43 178.7 131 64.1
SEGI_12033 Sequoiadendron giganteum HOM05D005904 ORTHO05D007074 4.9e-42 175.6 125 68.8
Pp3c14_13400 Physcomitrium patens HOM05D005904 ORTHO05D007074 6.4e-42 175.3 137 57.7
ATR0661G556 Amborella trichopoda HOM05D005904 ORTHO05D007074 1.1e-41 174.5 139 67.6
PGSC0003DMG400002591 Solanum tuberosum HOM05D005904 ORTHO05D007074 7.8e-40 168.3 208 47.1
CBR_g18726 Chara braunii HOM05D005904 ORTHO05D007074 5.6e-38 162.2 136 55.1
SMO134G0002 Selaginella moellendorffii HOM05D005904 ORTHO05D007074 1.3e-37 161.0 132 56.8
Haze_15945 Corylus avellana HOM05D005904 ORTHO05D007074 6.2e-37 158.7 156 54.5
Nitab4.5_0007429g0020 Nicotiana tabacum HOM05D005904 ORTHO05D007074 9.0e-36 154.8 136 57.4
AL180U10010 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 2.7e-32 143.3 159 50.9
Sopen03g040340 Solanum pennellii HOM05D005904 ORTHO05D007074 3.5e-32 142.9 100 72.0
Actinidia32143 Actinidia chinensis HOM05D005904 ORTHO05D007074 3.3e-30 136.3 174 49.4
FAN17G1021 Fragaria x ananassa HOM05D005904 ORTHO05D007074 1.3e-29 134.4 98 70.4
Ca_01193_v3 Cicer arietinum L. HOM05D005904 ORTHO05D007074 7.6e-27 125.2 64 87.5
CARHR088470 Cardamine hirsuta HOM05D005904 ORTHO05D007074 1.6e-24 117.5 135 49.6
Atru.chr1.3683 Acer truncatum HOM05D005904 ORTHO05D007074 2.9e-18 96.7 122 49.2
PGR044G2333 Punica granatum HOM05D005904 ORTHO05D007074 4.9e-18 95.9 54 77.8
MCO11G030 Micromonas commoda HOM05D005904 ORTHO05D007074 9.3e-17 91.7 135 36.3
TPR.G6604 Trifolium pratense HOM05D005904 ORTHO05D007074 1.3e-15 87.8 72 61.1
CSS0026651 Camellia sinensis var. sinensis HOM05D005904 ORTHO05D007074 3.9e-15 86.3 50 78.0
CSS0024966 Camellia sinensis var. sinensis HOM05D005904 ORTHO05D007074 2.5e-14 83.6 122 45.1
Potri.003G038400 Populus trichocarpa HOM05D005904 ORTHO05D007074 1.8e-12 77.4 96 46.9
SGA_v2.0_scaffold71G23779 Striga asiatica HOM05D005904 ORTHO05D007074 4.2e-09 66.2 128 36.7
MCO01G154 Micromonas commoda HOM05D005904 ORTHO05D268674 3.9e-07 59.7 151 27.8
Oeu002508.1 Olea europaea HOM05D004582 ORTHO05D005507 3.3e-06 56.6 35 71.4


User provided reference genes

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