Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G1943 Trochodendron aralioides HOM05D000010 ORTHO05D415063 4.7e-45 184.1 90 100.0
TAR371G0082 Trochodendron aralioides HOM05D000010 ORTHO05D000302 6.4e-26 120.6 75 81.3
TAR629G1248 Trochodendron aralioides HOM05D000010 ORTHO05D000302 1.6e-16 89.4 67 67.2
TAR622G1012 Trochodendron aralioides HOM05D000010 ORTHO05D000302 3.9e-15 84.7 67 64.2
TAR374G0330 Trochodendron aralioides HOM05D000010 ORTHO05D000302 2.5e-14 82.0 79 58.2
Nn4g23226 Nelumbo nucifera HOM05D000010 ORTHO05D000302 8.1e-13 77.0 67 56.7
Dinv38734 Davidia involucrata HOM05D000010 ORTHO05D000302 3.1e-12 75.1 67 52.2
Dinv10646 Davidia involucrata HOM05D000010 ORTHO05D000302 6.9e-12 73.9 79 49.4
Thecc.04G086100 Theobroma cacao HOM05D000010 ORTHO05D000302 6.9e-12 73.9 66 53.0
COL.COLO4_00334 Corchorus olitorius HOM05D000010 ORTHO05D000302 2.6e-11 72.0 67 55.2
Aqoxy3G03452 Aquilegia oxysepala HOM05D000010 ORTHO05D000302 4.4e-11 71.2 70 55.7
Thecc.03G092300 Theobroma cacao HOM05D000010 ORTHO05D000302 5.8e-11 70.9 67 53.7
Manes.02G047801 Manihot esculenta HOM05D000010 ORTHO05D000302 9.9e-11 70.1 64 51.6
COL.COLO4_10337 Corchorus olitorius HOM05D000010 ORTHO05D000302 1.3e-10 69.7 63 54.0
Cpa.g.sc14.101 Carica papaya HOM05D000010 ORTHO05D000302 2.2e-10 68.9 67 49.3
Manes.06G090500 Manihot esculenta HOM05D000010 ORTHO05D000302 2.9e-10 68.6 67 53.7
QL02p084656 Quercus lobata HOM05D000010 ORTHO05D000302 2.9e-10 68.6 77 46.8
Duzib084G1190 Durio zibethinus HOM05D000010 ORTHO05D000302 3.8e-10 68.2 78 44.9
Potri.017G086200 Populus trichocarpa HOM05D000010 ORTHO05D000302 4.9e-10 67.8 78 46.2
Prupe.3G264600 Prunus persica HOM05D000010 ORTHO05D000302 6.4e-10 67.4 66 51.5
MBI02_g12279_MAGBIO Magnolia biondii HOM05D000010 ORTHO05D000302 8.4e-10 67.0 67 52.2
Atru.chr8.301 Acer truncatum HOM05D000010 ORTHO05D000302 1.1e-09 66.6 67 49.3
Ciclev10012093m.g Citrus clementina HOM05D000010 ORTHO05D000302 1.1e-09 66.6 66 47.0
Manes.01G093200 Manihot esculenta HOM05D000010 ORTHO05D000302 1.1e-09 66.6 68 47.1
QL10p017381 Quercus lobata HOM05D000010 ORTHO05D000302 1.1e-09 66.6 75 46.7
Ciclev10020480m.g Citrus clementina HOM05D000010 ORTHO05D000302 1.4e-09 66.2 68 50.0
Manes.14G080400 Manihot esculenta HOM05D000010 ORTHO05D000302 2.4e-09 65.5 67 47.8
CSS0038906 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000302 4.2e-09 64.7 78 44.9
CiPaw.04G015600 Carya illinoinensis HOM05D000010 ORTHO05D000302 4.2e-09 64.7 65 49.2
Sabra17G0076000 Salix brachista HOM05D000010 ORTHO05D000302 4.2e-09 64.7 66 53.0
CiPaw.11G046500 Carya illinoinensis HOM05D000010 ORTHO05D000302 5.4e-09 64.3 67 47.8
Duzib264G0152 Durio zibethinus HOM05D000010 ORTHO05D000302 9.3e-09 63.5 66 48.5
Sabra15G0015200 Salix brachista HOM05D000010 ORTHO05D000302 9.3e-09 63.5 67 50.7
Potri.015G020000 Populus trichocarpa HOM05D000010 ORTHO05D000302 1.2e-08 63.2 67 50.7
Duzib147G0963 Durio zibethinus HOM05D000010 ORTHO05D000302 1.6e-08 62.8 63 49.2
Duzib205G0167 Durio zibethinus HOM05D000010 ORTHO05D000302 1.6e-08 62.8 67 49.3
Hma1.2p1_0060F.1_g033610 Hydrangea macrophylla HOM05D000010 ORTHO05D000302 2.1e-08 62.4 66 51.5
Lj9C465T8 Lonicera japonica HOM05D000010 ORTHO05D000302 2.7e-08 62.0 66 50.0
FAN09G1635 Fragaria x ananassa HOM05D000010 ORTHO05D000302 4.6e-08 61.2 70 48.6
Duzib187G0419 Durio zibethinus HOM05D000010 ORTHO05D000302 6.0e-08 60.8 63 47.6
Glyma.17G101500 Glycine max HOM05D000010 ORTHO05D000302 7.8e-08 60.5 67 49.3
Haze_07306 Corylus avellana HOM05D000010 ORTHO05D000302 1.0e-07 60.1 67 52.2
AUR62018102 Chenopodium quinoa HOM05D000010 ORTHO05D000302 1.3e-07 59.7 79 45.6
RcHm_v2.0_Chr2g0167461 Rosa chinensis HOM05D000010 ORTHO05D000302 1.7e-07 59.3 68 48.5
Sabra12G0019900 Salix brachista HOM05D000010 ORTHO05D000302 1.7e-07 59.3 63 52.4
FAN05G5413 Fragaria x ananassa HOM05D000010 ORTHO05D000302 2.3e-07 58.9 70 47.1
Glyma.05G025500 Glycine max HOM05D000010 ORTHO05D000302 2.3e-07 58.9 67 47.8
Gohir.D12G181100 Gossypium hirsutum HOM05D000010 ORTHO05D000302 2.3e-07 58.9 66 43.9
Gorai.008G194400 Gossypium raimondii HOM05D000010 ORTHO05D000302 2.3e-07 58.9 66 43.9
Potri.012G001400 Populus trichocarpa HOM05D000010 ORTHO05D000302 2.3e-07 58.9 67 49.3
CSS0033241 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000302 3.9e-07 58.2 81 42.0
CSS0036452 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000302 3.9e-07 58.2 81 42.0
MD09G1053700 Malus domestica HOM05D000010 ORTHO05D000302 3.9e-07 58.2 68 48.5
Peaxi162Scf00274g00443 Petunia axillaris HOM05D000010 ORTHO05D000302 3.9e-07 58.2 67 41.8
CSS0011366 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000302 5.1e-07 57.8 67 43.3
Prupe.5G196000 Prunus persica HOM05D000010 ORTHO05D000302 5.1e-07 57.8 69 46.4
Phvul.003G189000 Phaseolus vulgaris HOM05D000010 ORTHO05D000302 6.6e-07 57.4 67 46.3
Dinv11513 Davidia involucrata HOM05D000010 ORTHO05D000302 8.7e-07 57.0 75 46.7
Gohir.A12G178600 Gossypium hirsutum HOM05D000010 ORTHO05D000302 8.7e-07 57.0 66 43.9
Duzib068G1144 Durio zibethinus HOM05D000010 ORTHO05D000302 1.1e-06 56.6 67 44.8
Hma1.2p1_0409F.1_g146810 Hydrangea macrophylla HOM05D000010 ORTHO05D000302 1.5e-06 56.2 78 44.9
FvH4_6g48120 Fragaria vesca HOM05D000010 ORTHO05D000302 1.9e-06 55.8 70 45.7
FAN02G1818 Fragaria x ananassa HOM05D000010 ORTHO05D000302 1.9e-06 55.8 70 45.7
MD17G1051600 Malus domestica HOM05D000010 ORTHO05D000302 1.9e-06 55.8 79 43.0
Cfa007581 Carpinus fangiana HOM05D000010 ORTHO05D000302 2.5e-06 55.5 67 43.3
MD06G1196100 Malus domestica HOM05D000010 ORTHO05D000302 3.3e-06 55.1 69 43.5
VMungo1215G2361 Vigna mungo HOM05D000010 ORTHO05D000302 3.3e-06 55.1 67 44.8
Haze_14506 Corylus avellana HOM05D000010 ORTHO05D000302 4.3e-06 54.7 78 41.0
Medtr4g108760 Medicago truncatula HOM05D000010 ORTHO05D000302 4.3e-06 54.7 67 46.3
Phvul.009G186000 Phaseolus vulgaris HOM05D000010 ORTHO05D000302 4.3e-06 54.7 67 44.8
Glyma.06G195500 Glycine max HOM05D000010 ORTHO05D000302 5.6e-06 54.3 70 41.4
MD14G1203000 Malus domestica HOM05D000010 ORTHO05D000302 5.6e-06 54.3 69 43.5
FAN14G1082 Fragaria x ananassa HOM05D000010 ORTHO05D000302 7.3e-06 53.9 71 43.7
Glyma.04G167200 Glycine max HOM05D000010 ORTHO05D000302 7.3e-06 53.9 69 42.0
Ca_21813_v3 Cicer arietinum L. HOM05D000010 ORTHO05D000302 9.6e-06 53.5 67 44.8
Sc11g0007150 Simmondsia chinensis HOM05D000010 ORTHO05D000302 9.6e-06 53.5 78 41.0


User provided reference genes

Program Settings