Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G1919 Trochodendron aralioides HOM05D006426 ORTHO05D007737 9.0e-213 743.4 401 100.0
TAR627G1051 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.1e-122 444.1 459 57.1
Nn1g03877 Nelumbo nucifera HOM05D006426 ORTHO05D007737 4.6e-116 422.2 467 55.5
Dinv15495 Davidia involucrata HOM05D006426 ORTHO05D007737 8.6e-107 391.3 481 51.8
TAR629G2656 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.3e-102 377.5 419 56.6
QL08p037311 Quercus lobata HOM05D006426 ORTHO05D007737 6.4e-102 375.2 469 50.7
Cfa014544 Carpinus fangiana HOM05D006426 ORTHO05D007737 1.8e-96 357.1 464 49.4
Haze_13087 Corylus avellana HOM05D006426 ORTHO05D007737 2.4e-96 356.7 469 49.5
Actinidia09902 Actinidia chinensis HOM05D006426 ORTHO05D007737 9.3e-93 344.7 443 48.5
Cc05_g06260 Coffea canephora HOM05D006426 ORTHO05D007737 1.2e-92 344.4 489 45.2
TWI75G1119 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 1.2e-92 344.4 465 47.7
Gorai.005G205500 Gossypium raimondii HOM05D006426 ORTHO05D007737 1.6e-92 344.0 468 47.4
Gohir.D02G183100 Gossypium hirsutum HOM05D006426 ORTHO05D007737 2.1e-92 343.6 468 47.4
Gohir.A03G160000 Gossypium hirsutum HOM05D006426 ORTHO05D007737 7.9e-92 341.7 473 48.0
Actinidia12458 Actinidia chinensis HOM05D006426 ORTHO05D007737 5.1e-91 339.0 467 46.9
TWI36G1326 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 8.7e-91 338.2 466 48.5
Ciclev10015289m.g Citrus clementina HOM05D006426 ORTHO05D007737 1.6e-89 334.0 455 49.0
Hma1.2p1_0565F.1_g179550 Hydrangea macrophylla HOM05D006426 ORTHO05D007737 2.4e-88 330.1 463 46.7
CiPaw.04G122700 Carya illinoinensis HOM05D006426 ORTHO05D007737 5.8e-87 325.5 460 46.1
Rhsim06G0152100 Rhododendron simsii HOM05D006426 ORTHO05D007737 5.8e-87 325.5 486 45.1
Thecc.02G171600 Theobroma cacao HOM05D006426 ORTHO05D007737 7.6e-87 325.1 472 47.7
COL.COLO4_13683 Corchorus olitorius HOM05D006426 ORTHO05D007737 9.9e-87 324.7 476 46.8
TWI18G0136 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 1.3e-86 324.3 457 46.8
Manes.13G151600 Manihot esculenta HOM05D006426 ORTHO05D007737 2.9e-86 323.2 459 48.6
Nitab4.5_0001871g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 5.5e-85 318.9 483 45.3
Nitab4.5_0002370g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 1.2e-84 317.8 484 44.2
Prupe.3G231100 Prunus persica HOM05D006426 ORTHO05D007737 1.2e-84 317.8 473 45.9
Duzib248G1395 Durio zibethinus HOM05D006426 ORTHO05D007737 2.1e-84 317.0 473 46.5
Potri.013G147500 Populus trichocarpa HOM05D006426 ORTHO05D007737 3.5e-84 316.2 468 46.4
Duzib132G0414 Durio zibethinus HOM05D006426 ORTHO05D007737 7.9e-84 315.1 453 46.6
Sabra19G0136500 Salix brachista HOM05D006426 ORTHO05D007737 8.7e-83 311.6 465 44.7
Sabra19G0117200 Salix brachista HOM05D006426 ORTHO05D007737 2.5e-82 310.1 465 44.5
Potri.019G116200 Populus trichocarpa HOM05D006426 ORTHO05D007737 3.3e-82 309.7 463 44.7
Peaxi162Scf00007g00272 Petunia axillaris HOM05D006426 ORTHO05D007737 4.3e-82 309.3 483 44.1
Cpa.g.sc34.90 Carica papaya HOM05D006426 ORTHO05D007737 7.4e-82 308.5 470 44.9
PGSC0003DMG400018371 Solanum tuberosum HOM05D006426 ORTHO05D007737 4.8e-81 305.8 489 43.4
Sabra13G0119100 Salix brachista HOM05D006426 ORTHO05D007737 1.8e-80 303.9 466 45.7
Sopen07g028590 Solanum pennellii HOM05D006426 ORTHO05D007737 1.8e-80 303.9 489 43.6
Solyc07g054690.1 Solanum lycopersicum HOM05D006426 ORTHO05D007737 9.0e-80 301.6 489 43.4
Manes.12G083000 Manihot esculenta HOM05D006426 ORTHO05D007737 2.6e-79 300.1 456 44.1
PGR042G3565 Punica granatum HOM05D006426 ORTHO05D007737 2.2e-78 297.0 465 43.9
MD09G1096400 Malus domestica HOM05D006426 ORTHO05D007737 1.4e-77 294.3 475 42.3
MD17G1084500 Malus domestica HOM05D006426 ORTHO05D007737 5.5e-77 292.4 469 43.7
CAN.G508.22 Capsicum annuum HOM05D006426 ORTHO05D007737 7.9e-76 288.5 481 43.0
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 1.1e-74 284.6 478 41.0
Oeu025481.1 Olea europaea HOM05D006426 ORTHO05D007737 3.3e-74 283.1 515 39.0
MSTRG.14180 Avicennia marina HOM05D006426 ORTHO05D007737 5.7e-74 282.3 492 42.1
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 1.4e-72 277.7 482 42.1
PSO832G1174 Papaver somniferum HOM05D006426 ORTHO05D007737 1.4e-72 277.7 453 45.9
RcHm_v2.0_Chr2g0161781 Rosa chinensis HOM05D006426 ORTHO05D007737 1.8e-72 277.3 471 41.0
FvH4_6g44570 Fragaria vesca HOM05D006426 ORTHO05D007737 3.4e-71 273.1 467 41.8
FAN14G1414 Fragaria x ananassa HOM05D006426 ORTHO05D007737 3.4e-71 273.1 467 41.8
Aqoxy1G03895 Aquilegia oxysepala HOM05D006426 ORTHO05D007737 4.5e-71 272.7 514 41.1
Oeu018075.1 Olea europaea HOM05D006426 ORTHO05D007737 5.9e-71 272.3 485 41.2
FAN09G0359 Fragaria x ananassa HOM05D006426 ORTHO05D007737 1.0e-70 271.6 468 41.5
EL10Ac9g20938 Beta vulgaris HOM05D006426 ORTHO05D007737 1.7e-70 270.8 484 41.1
PSO210G4394 Papaver somniferum HOM05D006426 ORTHO05D007737 2.2e-70 270.4 450 43.8
MBI18_g45419_MAGBIO Magnolia biondii HOM05D006426 ORTHO05D007737 2.9e-70 270.0 468 42.9
FAN02G4384 Fragaria x ananassa HOM05D006426 ORTHO05D007737 1.1e-69 268.1 466 41.2
ClCG02G017320 Citrullus lanatus HOM05D006426 ORTHO05D007737 6.7e-67 258.8 469 40.5
PSO675G8522 Papaver somniferum HOM05D006426 ORTHO05D007737 8.7e-67 258.5 492 42.1
PSO541G1576 Papaver somniferum HOM05D006426 ORTHO05D007737 1.4e-64 251.1 493 41.4
Atru.chr6.3076 Acer truncatum HOM05D006426 ORTHO05D007737 1.2e-63 248.1 314 51.0
MELO3C013535.2 Cucumis melo HOM05D006426 ORTHO05D007737 2.6e-63 246.9 464 39.0
DCAR_009725 Daucus carota HOM05D006426 ORTHO05D007737 7.7e-63 245.4 471 39.7
Thhalv10025277m.g Eutrema salsugineum HOM05D006426 ORTHO05D007737 6.5e-62 242.3 431 40.1
Migut.H01020 Erythranthe guttata HOM05D006426 ORTHO05D007737 8.5e-62 241.9 498 38.6
THA.LOC104804065 Tarenaya hassleriana HOM05D006426 ORTHO05D007737 5.5e-61 239.2 457 38.5
CsaV3_6G012420 Cucumis sativus L. HOM05D006426 ORTHO05D007737 7.2e-61 238.8 464 39.2
Sed0007067 Sechium edule HOM05D006426 ORTHO05D007737 1.2e-60 238.0 466 39.7
SalBow1G4632 Salvia bowleyana HOM05D006426 ORTHO05D007737 3.7e-57 226.5 452 39.8
SGA_v2.0_scaffold49G18304 Striga asiatica HOM05D006426 ORTHO05D007737 6.3e-57 225.7 478 37.4
CARHR235940 Cardamine hirsuta HOM05D006426 ORTHO05D007737 1.8e-56 224.2 431 38.7
Lj8P117T60 Lonicera japonica HOM05D006426 ORTHO05D007737 2.4e-56 223.8 318 45.3
Sp7g26190 Schrenkiella parvula HOM05D006426 ORTHO05D007737 6.9e-56 222.2 445 38.7
AL7G24370 Arabidopsis lyrata HOM05D006426 ORTHO05D007737 7.7e-55 218.8 426 39.0
A01p19640 Brassica napus HOM05D006426 ORTHO05D007737 3.2e-53 213.4 416 38.9
Carub.0007s1253 Capsella rubella HOM05D006426 ORTHO05D007737 4.2e-53 213.0 427 38.2
Sc06g0009150 Simmondsia chinensis HOM05D006426 ORTHO05D007737 5.5e-53 212.6 467 38.1
AT4G28230 Arabidopsis thaliana HOM05D006426 ORTHO05D007737 7.2e-53 212.2 424 39.4
arahy.Tifrunner.gnm1.ann1.2866YZ Arachis hypogaea HOM05D006426 ORTHO05D007737 1.2e-52 211.5 489 35.8
Eucgr.A01776 Eucalyptus grandis HOM05D006426 ORTHO05D007737 1.2e-52 211.5 417 40.3
arahy.Tifrunner.gnm1.ann1.512YGT Arachis hypogaea HOM05D006426 ORTHO05D007737 2.1e-52 210.7 489 35.4
BcaNung01587 Brassica carinata HOM05D006426 ORTHO05D007737 4.7e-52 209.5 413 38.7
Aa31LG2G22090 Aethionema arabicum HOM05D006426 ORTHO05D007737 2.3e-51 207.2 408 38.5
unitig_52.g17339 Utricularia gibba HOM05D006426 ORTHO05D007737 3.3e-50 203.4 454 38.5
BraA01t01897Z Brassica rapa HOM05D006426 ORTHO05D007737 4.4e-50 203.0 414 37.9
DCAR_012977 Daucus carota HOM05D006426 ORTHO05D007737 1.3e-46 191.4 448 35.7
HanXRQChr15g0488091 Helianthus annuus HOM05D006426 ORTHO05D007737 1.7e-46 191.0 424 38.0
BolC1t02416H Brassica oleracea HOM05D006426 ORTHO05D007737 1.1e-45 188.3 415 37.3
C01p24670 Brassica napus HOM05D006426 ORTHO05D007737 1.5e-45 188.0 415 37.3
BcaC09g50504 Brassica carinata HOM05D006426 ORTHO05D007737 2.7e-44 183.7 417 36.7
Lsat_1_v5_gn_4_69460 Lactuca sativa HOM05D006426 ORTHO05D007737 6.7e-43 179.1 440 35.9
SGA_v2.0_scaffold159G37625 Striga asiatica HOM05D006426 ORTHO05D007737 9.7e-42 175.3 398 36.4
Lj3g0000273 Lotus japonicus HOM05D006426 ORTHO05D007737 4.1e-40 169.9 465 35.5
VMungo1080G0900 Vigna mungo HOM05D006426 ORTHO05D007737 6.5e-38 162.5 408 36.3
Phvul.005G017100 Phaseolus vulgaris HOM05D006426 ORTHO05D007737 1.1e-37 161.8 406 36.7
Glyma.11G158800 Glycine max HOM05D006426 ORTHO05D007737 3.2e-37 160.2 406 35.0
CDE10G0475 Ceratophyllum demersum HOM05D006426 ORTHO05D007737 4.2e-37 159.8 501 30.7
ECA232G2383 Erigeron canadensis HOM05D006426 ORTHO05D007737 3.6e-36 156.8 456 36.2
Glyma.04G132700 Glycine max HOM05D006426 ORTHO05D007737 6.8e-35 152.5 414 33.1
Sed0009175 Sechium edule HOM05D006426 ORTHO05D007737 2.6e-34 150.6 353 35.4
Lalb_Chr01g0017281 Lupinus albus HOM05D006426 ORTHO05D007737 8.3e-33 145.6 378 34.9
ATR0693G210 Amborella trichopoda HOM05D006426 ORTHO05D007737 2.7e-31 140.6 519 29.9
Medtr3g013540 Medicago truncatula HOM05D006426 ORTHO05D007737 1.0e-27 128.6 454 31.1
HPP92_011122 Vanilla planifolia HOM05D006426 ORTHO05D007737 3.0e-27 127.1 402 33.1
GSVIVG01030006001 Vitis vinifera HOM05D006426 ORTHO05D007737 1.1e-24 118.6 157 45.9
Psat5g223040 Pisum sativum HOM05D006426 ORTHO05D007737 5.4e-24 116.3 448 31.0
Ca_18074_v3 Cicer arietinum L. HOM05D006426 ORTHO05D007737 5.0e-22 109.8 424 33.3
HPP92_011117 Vanilla planifolia HOM05D006426 ORTHO05D007737 6.6e-22 109.4 420 29.0
Oeu029930.1 Olea europaea HOM05D006426 ORTHO05D007737 2.8e-20 104.0 147 40.8
Oeu035359.1 Olea europaea HOM05D006426 ORTHO05D007737 4.7e-20 103.2 151 41.7
TPR.G1458 Trifolium pratense HOM05D006426 ORTHO05D007737 2.3e-19 100.9 426 31.0
Oeu003230.1 Olea europaea HOM05D006426 ORTHO05D007737 1.5e-18 98.2 151 41.1
Lj1P736T39 Lonicera japonica HOM05D006426 ORTHO05D007737 4.4e-18 96.7 160 41.9
FvH4_6g44594 Fragaria vesca HOM05D006426 ORTHO05D007737 5.4e-16 89.7 148 41.2
unitig_62.g23190 Utricularia gibba HOM05D006426 ORTHO05D007737 2.1e-12 77.8 149 38.3
Atru.chr6.3075 Acer truncatum HOM05D006426 ORTHO05D007737 4.0e-11 73.6 69 58.0
SabraUnG0004200 Salix brachista HOM05D006426 ORTHO05D007737 5.2e-11 73.2 62 53.2
Zm00001eb273600 Zea mays HOM05D032587 ORTHO05D037111 6.4e-09 66.2 254 30.7
Lsat_1_v5_gn_5_187260 Lactuca sativa HOM05D006426 ORTHO05D007737 1.7e-06 58.2 160 36.2
Os06g0683900 Oryza sativa ssp. japonica HOM05D032587 ORTHO05D037111 2.3e-06 57.8 90 41.1


User provided reference genes

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