Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 1.1e-183 646.4 304 100.0
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 5.5e-162 574.3 304 88.2
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 9.3e-162 573.5 304 87.5
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 9.3e-162 573.5 306 86.9
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 7.9e-161 570.5 304 87.2
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 1.3e-160 569.7 304 86.5
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 1.3e-160 569.7 301 88.0
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 2.3e-160 568.9 306 87.3
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 3.0e-160 568.5 304 87.2
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 3.9e-160 568.2 304 85.9
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 1.5e-159 566.2 303 85.5
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 1.5e-159 566.2 303 85.8
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 2.5e-159 565.5 306 85.6
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 7.4e-159 563.9 304 86.8
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 2.1e-158 562.4 304 85.5
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 2.8e-158 562.0 302 86.1
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 3.7e-158 561.6 306 85.9
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 3.7e-158 561.6 306 85.9
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 6.2e-158 560.8 304 86.2
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 1.1e-157 560.1 303 85.5
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 6.9e-157 557.4 302 86.1
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 7.6e-156 553.9 304 83.2
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 1.3e-155 553.1 304 84.9
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 3.8e-155 551.6 304 83.9
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 8.4e-155 550.4 306 84.0
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 8.4e-155 550.4 304 83.9
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 1.9e-154 549.3 304 83.2
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 4.2e-154 548.1 298 86.6
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 5.5e-154 547.7 298 86.6
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 1.6e-153 546.2 301 83.7
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 2.7e-153 545.4 304 83.2
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 4.6e-153 544.7 302 83.4
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 4.6e-153 544.7 301 84.1
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 1.0e-152 543.5 298 85.2
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 1.8e-152 542.7 304 82.6
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 1.8e-152 542.7 301 83.7
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 5.1e-152 541.2 297 84.2
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 4.3e-151 538.1 304 81.6
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 4.8e-150 534.6 305 82.3
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 6.3e-150 534.3 304 81.6
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 6.3e-150 534.3 299 80.9
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 1.4e-149 533.1 298 81.5
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 1.4e-149 533.1 304 81.6
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 1.8e-149 532.7 293 85.3
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 4.1e-149 531.6 310 78.7
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 5.3e-149 531.2 304 81.2
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 9.0e-149 530.4 304 81.6
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 1.5e-148 529.6 310 78.1
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 3.4e-148 528.5 310 78.1
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 3.4e-148 528.5 293 84.0
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 4.5e-148 528.1 304 80.9
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 1.0e-147 526.9 308 78.2
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 1.7e-147 526.2 310 77.7
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 1.9e-146 522.7 303 80.9
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 1.9e-146 522.7 304 82.6
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 9.4e-146 520.4 304 79.6
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 1.6e-145 519.6 307 78.5
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 1.6e-145 519.6 300 79.3
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 1.4e-144 516.5 301 78.7
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 2.3e-144 515.8 301 78.7
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 5.1e-144 514.6 301 78.4
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 5.1e-144 514.6 301 78.4
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 5.1e-144 514.6 301 78.4
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 8.8e-144 513.8 296 78.7
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 2.0e-143 512.7 300 78.0
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 4.3e-143 511.5 408 64.2
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 9.7e-143 510.4 354 70.3
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 2.2e-139 499.2 301 78.1
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 6.1e-137 491.1 280 81.8
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 7.9e-137 490.7 302 75.5
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 1.8e-133 479.6 271 82.7
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 1.2e-132 476.9 293 77.5
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 3.6e-129 465.3 256 84.8
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 4.8e-126 454.9 304 73.0
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 3.1e-125 452.2 296 73.3
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 2.9e-123 445.7 301 70.8
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 1.1e-122 443.7 320 66.9
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 1.9e-122 443.0 264 78.4
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 1.1e-117 427.2 257 77.8
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 6.1e-113 411.4 296 62.5
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 5.5e-106 388.3 331 60.4
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 1.5e-95 353.6 301 60.5
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 4.4e-95 352.1 269 65.4
Nitab4.5_0009876g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 3.5e-92 342.4 178 87.6
Cpa.g.sc46.157 Carica papaya HOM05D005968 ORTHO05D007158 1.8e-88 330.1 170 89.4
Lalb_Chr12g0198711 Lupinus albus HOM05D005968 ORTHO05D007158 1.8e-88 330.1 168 88.7
GSVIVG01023606001 Vitis vinifera HOM05D005968 ORTHO05D007158 3.1e-88 329.3 168 89.3
Cc06_g14950 Coffea canephora HOM05D005968 ORTHO05D007158 3.4e-87 325.9 168 89.3
TPR.G24830 Trifolium pratense HOM05D005968 ORTHO05D007158 3.4e-87 325.9 168 86.9
Oeu038140.1 Olea europaea HOM05D005968 ORTHO05D007158 7.5e-87 324.7 165 88.5
RcHm_v2.0_Chr2g0085611 Rosa chinensis HOM05D005968 ORTHO05D007158 3.7e-86 322.4 168 85.7
Medtr4g130830 Medicago truncatula HOM05D005968 ORTHO05D007158 6.4e-86 321.6 168 86.9
MSTRG.26272 Avicennia marina HOM05D005968 ORTHO05D007158 1.9e-85 320.1 165 87.3
Lsat_1_v5_gn_4_18721 Lactuca sativa HOM05D005968 ORTHO05D007158 3.2e-85 319.3 178 82.0
Sopen07g001720 Solanum pennellii HOM05D005968 ORTHO05D007158 4.1e-85 318.9 168 86.3
CAN.G160.61 Capsicum annuum HOM05D005968 ORTHO05D007158 5.4e-85 318.5 168 85.7
Eucgr.C02540 Eucalyptus grandis HOM05D005968 ORTHO05D007158 1.6e-84 317.0 168 85.7
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 3.5e-84 315.8 185 82.2
Sc17g0006690 Simmondsia chinensis HOM05D005968 ORTHO05D007158 3.5e-84 315.8 163 88.3
FAN28G0447 Fragaria x ananassa HOM05D005968 ORTHO05D007158 4.6e-84 315.5 168 84.5
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 6.8e-80 301.6 248 55.6
vmacro06082 Vaccinium macrocarpon HOM05D005968 ORTHO05D007158 9.9e-79 297.7 185 75.7
Haze_19205 Corylus avellana HOM05D005968 ORTHO05D007158 7.3e-74 281.6 144 90.3
GSVIVG01023605001 Vitis vinifera HOM05D005968 ORTHO05D007158 3.2e-61 239.6 122 90.2
Dinv43246 Davidia involucrata HOM05D005968 ORTHO05D007158 3.3e-58 229.6 120 89.2
Lalb_Chr12g0198701 Lupinus albus HOM05D005968 ORTHO05D007158 5.6e-58 228.8 118 88.1
TPR.G24874 Trifolium pratense HOM05D005968 ORTHO05D007158 3.6e-57 226.1 118 85.6
RcHm_v2.0_Chr2g0085621 Rosa chinensis HOM05D005968 ORTHO05D007158 6.2e-57 225.3 123 82.9
Medtr4g130840 Medicago truncatula HOM05D005968 ORTHO05D007158 1.4e-56 224.2 120 83.3
MELO3C010224.2 Cucumis melo HOM05D005968 ORTHO05D007158 6.9e-56 221.9 130 80.8
ClCG06G012410 Citrullus lanatus HOM05D005968 ORTHO05D007158 9.0e-56 221.5 130 80.8
RhsimUnG0158300 Rhododendron simsii HOM05D005968 ORTHO05D001263 1.2e-55 221.1 117 82.9
Cc06_g14960 Coffea canephora HOM05D005968 ORTHO05D007158 4.5e-55 219.2 119 83.2
TAR636G1721 Trochodendron aralioides HOM05D005968 ORTHO05D007158 7.6e-55 218.4 110 91.8
Sopen07g001730 Solanum pennellii HOM05D005968 ORTHO05D007158 1.3e-54 217.6 119 83.2
Solyc07g005620.2 Solanum lycopersicum HOM05D005968 ORTHO05D007158 2.9e-54 216.5 119 82.4
Oeu038141.1 Olea europaea HOM05D005968 ORTHO05D007158 3.2e-53 213.0 119 81.5
Cpa.g.sc46.156 Carica papaya HOM05D005968 ORTHO05D007158 2.5e-50 203.4 140 70.7
HPP92_004698 Vanilla planifolia HOM05D005968 ORTHO05D007158 2.1e-49 200.3 120 80.0
Os05g0279600 Oryza sativa ssp. japonica HOM05D005968 ORTHO05D007158 4.8e-49 199.1 120 75.0
Aa31LG2G19470 Aethionema arabicum HOM05D005968 ORTHO05D007158 1.1e-48 198.0 110 80.0
HPP92_004697 Vanilla planifolia HOM05D005968 ORTHO05D007158 2.4e-48 196.8 101 84.2
CDE04G1812 Ceratophyllum demersum HOM05D005968 ORTHO05D007158 2.2e-33 147.1 82 79.3
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 2.8e-33 146.7 254 36.6
TAR636G0142 Trochodendron aralioides HOM05D002374 ORTHO05D003594 3.4e-31 139.8 71 90.1
arahy.Tifrunner.gnm1.ann1.HW7BNQ Arachis hypogaea HOM05D005968 ORTHO05D007158 4.5e-31 139.4 69 92.8
Lsat_1_v5_gn_4_18741 Lactuca sativa HOM05D005968 ORTHO05D007158 7.2e-29 132.1 82 74.4
Nitab4.5_0006121g0010 Nicotiana tabacum HOM05D005968 ORTHO05D007158 2.5e-26 123.6 65 87.7
Eucgr.C02541 Eucalyptus grandis HOM05D005968 ORTHO05D007158 9.7e-18 95.1 64 70.3
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 3.7e-17 93.2 66 65.2
arahy.Tifrunner.gnm1.ann1.QXT71M Arachis hypogaea HOM05D005968 ORTHO05D007158 4.2e-13 79.7 40 85.0
arahy.Tifrunner.gnm1.ann1.HGKJ8P Arachis hypogaea HOM05D005968 ORTHO05D007158 6.1e-12 75.9 56 66.1
arahy.Tifrunner.gnm1.ann1.VCSM30 Arachis hypogaea HOM05D005968 ORTHO05D007158 2.3e-11 73.9 42 78.6
Haze_19213 Corylus avellana HOM05D000344 ORTHO05D005296 1.5e-10 71.2 34 91.2


User provided reference genes

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