Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 4.9e-100 367.9 191 100.0
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 1.5e-53 213.4 122 92.6
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 1.1e-51 207.2 120 90.0
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 1.9e-51 206.5 120 90.8
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 7.1e-51 204.5 129 83.7
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 1.2e-50 203.8 120 85.8
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 1.2e-50 203.8 120 90.0
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 2.1e-50 203.0 120 86.7
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 2.1e-50 203.0 129 82.9
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 2.7e-50 202.6 120 88.3
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 2.7e-50 202.6 120 88.3
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 3.5e-50 202.2 120 86.7
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 3.5e-50 202.2 129 80.6
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 3.5e-50 202.2 129 81.4
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 4.6e-50 201.8 120 85.8
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 6.0e-50 201.4 132 77.3
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 6.0e-50 201.4 129 83.7
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 6.0e-50 201.4 129 83.7
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 7.9e-50 201.1 129 83.7
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 7.9e-50 201.1 129 83.7
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 7.9e-50 201.1 129 83.7
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 7.9e-50 201.1 129 83.7
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 7.9e-50 201.1 129 82.2
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 1.0e-49 200.7 120 85.0
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 1.0e-49 200.7 129 81.4
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 1.0e-49 200.7 129 82.9
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 1.0e-49 200.7 120 87.5
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 1.3e-49 200.3 129 82.2
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 1.3e-49 200.3 118 89.0
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 1.3e-49 200.3 129 82.9
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.3e-49 200.3 120 87.5
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.3e-49 200.3 120 87.5
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.3e-49 200.3 120 87.5
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 1.8e-49 199.9 120 85.8
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 1.8e-49 199.9 120 85.8
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 2.3e-49 199.5 129 82.2
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 3.9e-49 198.7 120 86.7
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 3.9e-49 198.7 120 84.2
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 5.1e-49 198.4 120 84.2
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 1.1e-48 197.2 120 84.2
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.5e-48 196.8 128 79.7
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 1.9e-48 196.4 120 84.2
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 1.9e-48 196.4 129 78.3
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 1.9e-48 196.4 119 84.9
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.9e-48 196.4 120 83.3
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 2.5e-48 196.1 120 85.0
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 2.5e-48 196.1 120 82.5
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 3.3e-48 195.7 120 81.7
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 4.3e-48 195.3 129 76.7
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 5.7e-48 194.9 129 77.5
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 7.4e-48 194.5 129 76.7
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 7.4e-48 194.5 118 84.7
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 7.4e-48 194.5 118 84.7
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 7.4e-48 194.5 129 76.0
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 9.6e-48 194.1 129 76.0
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 9.6e-48 194.1 129 76.7
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 9.6e-48 194.1 129 76.0
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 9.6e-48 194.1 120 84.2
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 9.6e-48 194.1 120 82.5
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 1.3e-47 193.7 120 81.7
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.6e-47 193.4 115 85.2
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 1.6e-47 193.4 120 84.2
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 1.6e-47 193.4 120 84.2
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 1.6e-47 193.4 120 84.2
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 1.6e-47 193.4 129 78.3
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 2.1e-47 193.0 129 76.7
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 2.1e-47 193.0 118 84.7
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 2.8e-47 192.6 129 79.1
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 3.7e-47 192.2 129 76.0
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 4.8e-47 191.8 122 78.7
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 4.8e-47 191.8 120 82.5
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 6.3e-47 191.4 129 72.9
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 6.3e-47 191.4 129 72.9
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 6.3e-47 191.4 120 81.7
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 6.3e-47 191.4 129 76.0
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 8.2e-47 191.0 120 80.8
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 1.1e-46 190.7 129 72.9
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 1.1e-46 190.7 129 72.9
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 1.4e-46 190.3 112 86.6
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 1.4e-46 190.3 120 81.7
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 1.4e-46 190.3 118 81.4
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 1.4e-46 190.3 120 80.8
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 1.4e-46 190.3 120 80.0
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 1.8e-46 189.9 129 73.6
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 1.8e-46 189.9 129 72.1
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 1.8e-46 189.9 129 73.6
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 1.8e-46 189.9 129 72.1
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 1.8e-46 189.9 118 84.7
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 1.8e-46 189.9 118 82.2
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 1.8e-46 189.9 118 82.2
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 1.8e-46 189.9 118 82.2
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 4.1e-46 188.7 130 78.5
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 4.1e-46 188.7 120 80.8
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 6.9e-46 188.0 129 76.7
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 1.2e-45 187.2 120 80.0
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.5e-45 186.8 110 89.1
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 1.5e-45 186.8 120 78.3
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 2.6e-45 186.0 120 80.0
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 3.4e-45 185.7 120 79.2
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 4.5e-45 185.3 120 80.0
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 4.5e-45 185.3 127 74.8
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 7.6e-45 184.5 120 78.3
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 1.7e-44 183.3 107 87.9
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 2.2e-44 183.0 120 77.5
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 2.9e-44 182.6 129 75.2
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 2.9e-44 182.6 129 75.2
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 3.8e-44 182.2 129 73.6
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 3.2e-43 179.1 110 84.5
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 9.3e-43 177.6 120 75.0
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 1.0e-41 174.1 129 70.5
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 5.1e-41 171.8 129 72.1
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 1.9e-40 169.9 107 80.4
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 1.9e-40 169.9 129 70.5
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 1.3e-39 167.2 106 82.1
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 1.3e-39 167.2 116 70.7
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 2.4e-38 162.9 118 66.1
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 9.1e-38 161.0 95 85.3
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 4.5e-37 158.7 115 66.1
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 2.2e-36 156.4 95 83.2
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 5.0e-36 155.2 117 70.1
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 6.5e-36 154.8 120 67.5
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 1.1e-35 154.1 120 63.3
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 5.1e-33 145.2 125 62.4
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 1.9e-27 126.7 76 82.9
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 4.1e-22 109.0 119 44.5
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.7e-15 87.0 106 50.9


User provided reference genes

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