Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G1848 Trochodendron aralioides HOM05D006171 ORTHO05D007294 4.2e-167 591.3 298 100.0
CAN.G1008.12 Capsicum annuum HOM05D006171 ORTHO05D007294 4.6e-137 491.5 299 80.3
Peaxi162Scf00314g01040 Petunia axillaris HOM05D006171 ORTHO05D007294 4.6e-137 491.5 308 78.6
Nn2g12468 Nelumbo nucifera HOM05D006171 ORTHO05D007294 3.0e-136 488.8 301 81.1
Nitab4.5_0002700g0080 Nicotiana tabacum HOM05D006171 ORTHO05D007294 4.3e-135 485.0 307 77.9
CiPaw.01G256900 Carya illinoinensis HOM05D006171 ORTHO05D007294 2.8e-134 482.3 295 79.0
Duzib235G0222 Durio zibethinus HOM05D006171 ORTHO05D007294 4.7e-134 481.5 269 85.1
Thecc.06G048100 Theobroma cacao HOM05D006171 ORTHO05D007294 1.8e-133 479.6 267 86.1
TWI12G1342 Tripterygium wilfordii HOM05D006171 ORTHO05D007294 1.8e-133 479.6 305 76.7
Solyc03g117740.3 Solanum lycopersicum HOM05D006171 ORTHO05D007294 3.1e-133 478.8 299 78.6
PGR102G1595 Punica granatum HOM05D006171 ORTHO05D007294 5.2e-133 478.0 269 85.1
Cfa001846 Carpinus fangiana HOM05D006171 ORTHO05D007294 6.8e-133 477.6 301 79.1
Lj5C82T4 Lonicera japonica HOM05D006171 ORTHO05D007294 1.2e-132 476.9 267 86.5
Sopen03g036650 Solanum pennellii HOM05D006171 ORTHO05D007294 1.2e-132 476.9 299 78.3
Aqoxy7G02339 Aquilegia oxysepala HOM05D006171 ORTHO05D007294 1.5e-132 476.5 268 85.4
CSS0034221 Camellia sinensis var. sinensis HOM05D006171 ORTHO05D007294 2.0e-132 476.1 309 77.7
Manes.11G069800 Manihot esculenta HOM05D006171 ORTHO05D007294 3.4e-132 475.3 268 84.3
SalBow1G2136 Salvia bowleyana HOM05D006171 ORTHO05D007294 4.4e-132 474.9 307 76.5
Potri.003G185754 Populus trichocarpa HOM05D006171 ORTHO05D007294 1.3e-131 473.4 284 82.0
PGSC0003DMG400014158 Solanum tuberosum HOM05D006171 ORTHO05D007294 2.2e-131 472.6 297 77.8
Ah.09g231760 Amaranthus hybridus HOM05D006171 ORTHO05D007294 2.9e-131 472.2 285 80.0
Potri.003G185501 Populus trichocarpa HOM05D006171 ORTHO05D007294 2.9e-131 472.2 269 84.8
FvH4_6g28180 Fragaria vesca HOM05D006171 ORTHO05D007294 8.3e-131 470.7 291 78.4
FAN14G3270 Fragaria x ananassa HOM05D006171 ORTHO05D007294 8.3e-131 470.7 291 78.4
Prupe.3G104600 Prunus persica HOM05D006171 ORTHO05D007294 8.3e-131 470.7 263 84.8
Potri.003G185901 Populus trichocarpa HOM05D006171 ORTHO05D007294 1.1e-130 470.3 264 86.0
Eucgr.F03988 Eucalyptus grandis HOM05D006171 ORTHO05D007294 1.4e-130 469.9 269 84.0
Cpa.g.sc95.67 Carica papaya HOM05D006171 ORTHO05D007294 1.9e-130 469.5 292 79.1
Nitab4.5_0004738g0050 Nicotiana tabacum HOM05D006171 ORTHO05D007294 2.4e-130 469.2 307 77.2
MSTRG.9390 Avicennia marina HOM05D006171 ORTHO05D007294 3.2e-130 468.8 299 78.3
FAN09G0753 Fragaria x ananassa HOM05D006171 ORTHO05D007294 3.2e-130 468.8 291 78.4
Sabra03G0135700 Salix brachista HOM05D006171 ORTHO05D007294 3.2e-130 468.8 276 83.7
COL.COLO4_26789 Corchorus olitorius HOM05D006171 ORTHO05D007294 9.2e-130 467.2 254 88.2
Lsat_1_v5_gn_4_84921 Lactuca sativa HOM05D006171 ORTHO05D007294 9.2e-130 467.2 311 73.6
Gohir.D05G117900 Gossypium hirsutum HOM05D006171 ORTHO05D007294 1.2e-129 466.8 310 74.8
Potri.001G040100 Populus trichocarpa HOM05D006171 ORTHO05D007294 2.7e-129 465.7 269 83.6
MD09G1228700 Malus domestica HOM05D006171 ORTHO05D007294 1.3e-128 463.4 263 84.4
RcHm_v2.0_Chr2g0132161 Rosa chinensis HOM05D006171 ORTHO05D007294 1.3e-128 463.4 303 76.2
Atru.chr1.2816 Acer truncatum HOM05D006171 ORTHO05D007294 1.7e-128 463.0 296 77.4
Rhsim12G0183500 Rhododendron simsii HOM05D006171 ORTHO05D007294 5.1e-128 461.5 255 86.3
THA.LOC104812426 Tarenaya hassleriana HOM05D006171 ORTHO05D007294 5.1e-128 461.5 269 82.5
CsaV3_7G031750 Cucumis sativus L. HOM05D006171 ORTHO05D007294 1.1e-127 460.3 289 77.2
Hund22405 Selenicereus undatus HOM05D006171 ORTHO05D007294 1.1e-127 460.3 262 84.7
Sc10g0006500 Simmondsia chinensis HOM05D006171 ORTHO05D007294 1.5e-127 459.9 269 81.8
Actinidia36860 Actinidia chinensis HOM05D006171 ORTHO05D007294 3.3e-127 458.8 265 82.6
MELO3C023482.2 Cucumis melo HOM05D006171 ORTHO05D007294 4.3e-127 458.4 289 76.8
Thhalv10008259m.g Eutrema salsugineum HOM05D006171 ORTHO05D007294 4.3e-127 458.4 281 77.9
Sp1g14390 Schrenkiella parvula HOM05D006171 ORTHO05D007294 7.3e-127 457.6 280 77.9
AL1G28240 Arabidopsis lyrata HOM05D006171 ORTHO05D007294 9.5e-127 457.2 269 80.3
AUR62002650 Chenopodium quinoa HOM05D006171 ORTHO05D007294 1.2e-126 456.8 265 81.1
ECA232G3902 Erigeron canadensis HOM05D006171 ORTHO05D007294 1.2e-126 456.8 268 81.3
AT1G16080 Arabidopsis thaliana HOM05D006171 ORTHO05D007294 2.1e-126 456.1 269 79.9
Carub.0001s1588 Capsella rubella HOM05D006171 ORTHO05D007294 2.1e-126 456.1 278 78.4
A09p61030 Brassica napus HOM05D000031 ORTHO05D007294 4.7e-126 454.9 268 79.5
BraA09t41476Z Brassica rapa HOM05D000031 ORTHO05D007294 4.7e-126 454.9 268 79.5
ClCG09G003450 Citrullus lanatus HOM05D006171 ORTHO05D007294 4.7e-126 454.9 289 75.8
Migut.D01148 Erythranthe guttata HOM05D006171 ORTHO05D007294 4.7e-126 454.9 308 73.1
Ciclev10025944m.g Citrus clementina HOM05D006171 ORTHO05D007294 8.1e-126 454.1 298 76.2
A06p12100 Brassica napus HOM05D006171 ORTHO05D007294 2.3e-125 452.6 281 77.9
HanXRQChr16g0499501 Helianthus annuus HOM05D006171 ORTHO05D007294 3.1e-125 452.2 291 77.3
BcaB02g06590 Brassica carinata HOM05D006171 ORTHO05D007294 4.0e-125 451.8 281 77.6
BolC5t30159H Brassica oleracea HOM05D006171 ORTHO05D007294 8.9e-125 450.7 281 76.9
BraA06t24379Z Brassica rapa HOM05D006171 ORTHO05D007294 1.2e-124 450.3 281 77.6
BcaC05g25605 Brassica carinata HOM05D006171 ORTHO05D007294 1.5e-124 449.9 281 76.9
SGA_v2.0_scaffold74G24604 Striga asiatica HOM05D006171 ORTHO05D007294 2.0e-124 449.5 310 73.5
CDE07G0158 Ceratophyllum demersum HOM05D006171 ORTHO05D007294 2.6e-124 449.1 298 73.2
VMungo0647G1588 Vigna mungo HOM05D006171 ORTHO05D007294 2.6e-124 449.1 280 76.8
Lalb_Chr25g0278721 Lupinus albus HOM05D006171 ORTHO05D007294 3.4e-124 448.7 301 74.8
Glyma.08G220900 Glycine max HOM05D006171 ORTHO05D007294 5.8e-124 448.0 295 74.6
arahy.Tifrunner.gnm1.ann1.B85C5A Arachis hypogaea HOM05D006171 ORTHO05D007294 7.6e-124 447.6 268 79.9
arahy.Tifrunner.gnm1.ann1.F1WQ27 Arachis hypogaea HOM05D006171 ORTHO05D007294 9.9e-124 447.2 268 79.9
Potri.001G041140 Populus trichocarpa HOM05D006171 ORTHO05D007294 1.3e-123 446.8 269 81.4
unitig_62.g23820 Utricularia gibba HOM05D006171 ORTHO05D007294 1.7e-123 446.4 299 74.2
vmacro16838 Vaccinium macrocarpon HOM05D006171 ORTHO05D007294 1.7e-123 446.4 251 86.1
C08p44630 Brassica napus HOM05D000031 ORTHO05D007294 2.2e-123 446.0 299 72.6
BolC8t52009H Brassica oleracea HOM05D000031 ORTHO05D007294 2.2e-123 446.0 299 72.6
Oeu003115.1 Olea europaea HOM05D006171 ORTHO05D007294 3.7e-123 445.3 243 86.8
Oeu003116.1 Olea europaea HOM05D006171 ORTHO05D007294 3.7e-123 445.3 243 86.8
C05p14280 Brassica napus HOM05D006171 ORTHO05D007294 4.9e-123 444.9 281 76.5
GSVIVG01016093001 Vitis vinifera HOM05D006171 ORTHO05D007294 4.9e-123 444.9 243 87.7
BcaB03g14506 Brassica carinata HOM05D000031 ORTHO05D007294 6.4e-123 444.5 269 78.1
Glyma.07G020900 Glycine max HOM05D006171 ORTHO05D007294 6.4e-123 444.5 300 74.0
Phvul.008G253700 Phaseolus vulgaris HOM05D006171 ORTHO05D007294 1.1e-122 443.7 263 79.5
HPP92_021945 Vanilla planifolia HOM05D006171 ORTHO05D007294 1.4e-122 443.4 278 76.3
Psat7g260440 Pisum sativum HOM05D006171 ORTHO05D007294 2.4e-122 442.6 274 77.7
VMungo1309G0227 Vigna mungo HOM05D006171 ORTHO05D007294 2.4e-122 442.6 266 78.6
Aa31LG7G650 Aethionema arabicum HOM05D006171 ORTHO05D007294 3.2e-122 442.2 281 75.8
Medtr4g007910 Medicago truncatula HOM05D006171 ORTHO05D007294 4.1e-122 441.8 269 77.7
AUR62034059 Chenopodium quinoa HOM05D006171 ORTHO05D007294 1.2e-121 440.3 309 70.2
Lj3g0005429 Lotus japonicus HOM05D006171 ORTHO05D007294 3.5e-121 438.7 280 76.1
Phvul.009G155700 Phaseolus vulgaris HOM05D006171 ORTHO05D007294 3.9e-120 435.3 278 73.7
Cc04_g05360 Coffea canephora HOM05D006171 ORTHO05D007294 5.1e-120 434.9 243 84.8
Zm00001eb177930 Zea mays HOM05D006171 ORTHO05D007294 1.1e-119 433.7 281 76.2
CSS0033272 Camellia sinensis var. sinensis HOM05D006171 ORTHO05D007294 3.3e-119 432.2 309 72.2
MBI14_g16440_MAGBIO Magnolia biondii HOM05D006171 ORTHO05D007294 1.2e-118 430.3 252 82.1
EL10Ac8g19420 Beta vulgaris HOM05D006171 ORTHO05D007294 2.3e-112 409.5 288 70.8
Gorai.009G121800 Gossypium raimondii HOM05D006171 ORTHO05D007294 4.2e-106 388.7 219 86.8
Pp3c1_40240 Physcomitrium patens HOM05D006171 ORTHO05D007294 4.8e-102 375.2 267 66.3
Dinv21434 Davidia involucrata HOM05D006171 ORTHO05D007294 1.1e-101 374.0 247 79.8
CBR_g3722 Chara braunii HOM05D006171 ORTHO05D007294 2.2e-99 366.3 265 65.7
FAN05G3051 Fragaria x ananassa HOM05D006171 ORTHO05D007294 6.4e-99 364.8 266 71.1
Mapoly0047s0137 Marchantia polymorpha HOM05D006171 ORTHO05D007294 3.2e-98 362.5 260 64.2
SMO356G0223 Selaginella moellendorffii HOM05D006171 ORTHO05D007294 3.5e-97 359.0 259 64.1
Os08g0266300 Oryza sativa ssp. japonica HOM05D006171 ORTHO05D007294 1.8e-96 356.7 226 77.4
CBR_g39222 Chara braunii HOM05D006171 ORTHO05D007294 3.0e-96 355.9 257 65.4
CANSAT64G1829 Cannabis sativa HOM05D006171 ORTHO05D007294 8.7e-96 354.4 192 88.0
HanXRQChr16g0499491 Helianthus annuus HOM05D006171 ORTHO05D007294 1.4e-93 347.1 266 63.9
MD17G1227100 Malus domestica HOM05D006171 ORTHO05D007294 1.3e-91 340.5 190 85.8
PSO017G5952 Papaver somniferum HOM05D006171 ORTHO05D007294 1.7e-91 340.1 192 82.8
PSO170G6342 Papaver somniferum HOM05D006171 ORTHO05D007294 6.5e-91 338.2 192 82.3
ATR0580G215 Amborella trichopoda HOM05D006171 ORTHO05D007294 2.1e-89 333.2 190 83.2
MCO15G666 Micromonas commoda HOM05D006171 ORTHO05D007294 4.1e-85 318.9 264 59.5
Gohir.A05G117000 Gossypium hirsutum HOM05D006171 ORTHO05D007294 2.0e-84 316.6 173 86.7
Cre10.g435850 Chlamydomonas reinhardtii HOM05D006171 ORTHO05D007294 1.9e-82 310.1 256 60.5
QL05p037111 Quercus lobata HOM05D006171 ORTHO05D007294 5.5e-82 308.5 186 80.1
AagrBONN_evm.TU.Sc2ySwM_344.694 Anthoceros agrestis HOM05D006171 ORTHO05D007294 9.3e-82 307.8 256 60.9
PRCOL_00006061 Prasinoderma coloniale HOM05D006171 ORTHO05D007294 2.7e-81 306.2 243 60.1
Hma1.2p1_2173F.1_g316040 Hydrangea macrophylla HOM05D006171 ORTHO05D007294 9.0e-77 291.2 211 72.5
Aqoxy6G02563 Aquilegia oxysepala HOM05D006171 ORTHO05D007294 3.1e-69 266.2 257 54.9
RcHm_v2.0_Chr2g0132191 Rosa chinensis HOM05D006171 ORTHO05D007294 3.5e-60 236.1 188 64.4
Sed0008158 Sechium edule HOM05D006171 ORTHO05D007294 5.9e-60 235.3 157 70.7
Rhsim12G0183600 Rhododendron simsii HOM05D006171 ORTHO05D007294 8.5e-59 231.5 259 51.0
CDE04G3654 Ceratophyllum demersum HOM05D006171 ORTHO05D007294 5.2e-40 169.1 135 63.0
AagrBONN_evm.TU.Sc2ySwM_344.1199 Anthoceros agrestis HOM05D006171 ORTHO05D007294 7.0e-37 158.7 276 38.4
QL05p037113 Quercus lobata HOM05D006171 ORTHO05D007294 2.3e-35 153.7 82 84.1
Cre03.g167050 Chlamydomonas reinhardtii HOM05D006171 ORTHO05D007294 7.5e-23 112.1 317 29.0
SEGI_00638 Sequoiadendron giganteum HOM05D006171 ORTHO05D007294 8.3e-22 108.6 65 78.5
PRCOL_00003410 Prasinoderma coloniale HOM05D006171 ORTHO05D007294 1.4e-21 107.8 280 32.9
RcHm_v2.0_Chr2g0132221 Rosa chinensis HOM05D006171 ORTHO05D007294 4.1e-21 106.3 71 66.2
Nn5g31109 Nelumbo nucifera HOM05D006171 ORTHO05D007294 8.9e-16 88.6 81 61.7
arahy.Tifrunner.gnm1.ann1.VYJR5C Arachis hypogaea HOM05D006171 ORTHO05D007294 1.3e-14 84.7 104 53.8
CARHR016590 Cardamine hirsuta HOM05D006171 ORTHO05D007294 2.2e-06 57.4 58 53.4


User provided reference genes

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