Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G1828 Trochodendron aralioides HOM05D007708 ORTHO05D009506 4.9e-58 227.6 118 100.0
Nn1g06676 Nelumbo nucifera HOM05D007708 ORTHO05D009506 4.3e-14 81.6 104 53.8
Aqoxy1G02627 Aquilegia oxysepala HOM05D007708 ORTHO05D009506 5.6e-14 81.3 117 46.2
Manes.03G114400 Manihot esculenta HOM05D007708 ORTHO05D009506 4.0e-12 75.1 59 62.7
Thecc.07G075600 Theobroma cacao HOM05D007708 ORTHO05D009506 4.5e-11 71.6 59 61.0
Lj3g0000986 Lotus japonicus HOM05D007708 ORTHO05D009506 9.9e-11 70.5 75 52.0
Rhsim06G0195000 Rhododendron simsii HOM05D007708 ORTHO05D009506 1.7e-10 69.7 49 67.3
Potri.001G404500 Populus trichocarpa HOM05D007708 ORTHO05D009506 3.8e-10 68.6 104 46.2
Ca_01817_v3 Cicer arietinum L. HOM05D007708 ORTHO05D009506 6.4e-10 67.8 72 51.4
Potri.011G123600 Populus trichocarpa HOM05D007708 ORTHO05D009506 1.9e-09 66.2 105 45.7
Aa31LG10G2210 Aethionema arabicum HOM05D007708 ORTHO05D009506 3.2e-09 65.5 62 62.9
CiPaw.11G174300 Carya illinoinensis HOM05D007708 ORTHO05D009506 1.2e-08 63.5 102 45.1
Haze_09495 Corylus avellana HOM05D007708 ORTHO05D009506 1.6e-08 63.2 91 49.5
Duzib268G1443 Durio zibethinus HOM05D007708 ORTHO05D009506 1.6e-08 63.2 116 41.4
Cfa020536 Carpinus fangiana HOM05D007708 ORTHO05D009506 2.1e-08 62.8 61 60.7
Gohir.D01G054100 Gossypium hirsutum HOM05D007708 ORTHO05D009506 2.1e-08 62.8 96 45.8
Gorai.002G073900 Gossypium raimondii HOM05D007708 ORTHO05D009506 3.5e-08 62.0 113 43.4
TPR.G38977 Trifolium pratense HOM05D007708 ORTHO05D009506 4.6e-08 61.6 111 42.3
CSS0032536 Camellia sinensis var. sinensis HOM05D007708 ORTHO05D009506 6.0e-08 61.2 113 41.6
Gohir.A01G066900 Gossypium hirsutum HOM05D007708 ORTHO05D009506 6.0e-08 61.2 113 42.5
Psat5g246000 Pisum sativum HOM05D007708 ORTHO05D009506 7.9e-08 60.8 100 41.0
Sed0014711 Sechium edule HOM05D007708 ORTHO05D009506 7.9e-08 60.8 108 45.4
MBI02_g19253_MAGBIO Magnolia biondii HOM05D007708 ORTHO05D009506 1.0e-07 60.5 67 55.2
Prupe.4G187200 Prunus persica HOM05D007708 ORTHO05D009506 1.0e-07 60.5 83 49.4
Medtr2g080030 Medicago truncatula HOM05D007708 ORTHO05D009506 1.3e-07 60.1 105 39.0
DCAR_013081 Daucus carota HOM05D007708 ORTHO05D009506 1.8e-07 59.7 44 68.2
Glyma.12G221200 Glycine max HOM05D007708 ORTHO05D009506 1.8e-07 59.7 108 41.7
Lalb_Chr07g0181711 Lupinus albus HOM05D007708 ORTHO05D009506 1.8e-07 59.7 103 42.7
Aa31LG8G2750 Aethionema arabicum HOM05D007708 ORTHO05D009506 2.3e-07 59.3 82 43.9
ClCG11G018300 Citrullus lanatus HOM05D007708 ORTHO05D009506 2.3e-07 59.3 97 42.3
COL.COLO4_09450 Corchorus olitorius HOM05D007708 ORTHO05D009506 2.3e-07 59.3 38 73.7
THA.LOC104818058 Tarenaya hassleriana HOM05D007708 ORTHO05D009506 2.3e-07 59.3 83 50.6
RcHm_v2.0_Chr5g0034861 Rosa chinensis HOM05D007708 ORTHO05D009506 3.0e-07 58.9 102 48.0
FAN16G0929 Fragaria x ananassa HOM05D007708 ORTHO05D009506 5.1e-07 58.2 101 45.5
THA.LOC104810490 Tarenaya hassleriana HOM05D007708 ORTHO05D009506 5.1e-07 58.2 108 42.6
MELO3C018234.2 Cucumis melo HOM05D007708 ORTHO05D009506 6.7e-07 57.8 58 51.7
MD03G1222500 Malus domestica HOM05D007708 ORTHO05D009506 8.7e-07 57.4 92 44.6
FvH4_3g20710 Fragaria vesca HOM05D007708 ORTHO05D009506 1.1e-06 57.0 101 45.5
FAN11G2360 Fragaria x ananassa HOM05D007708 ORTHO05D009506 1.1e-06 57.0 101 45.5
MD11G1239800 Malus domestica HOM05D007708 ORTHO05D009506 1.1e-06 57.0 95 48.4
Nn2g10233 Nelumbo nucifera HOM05D007708 ORTHO05D009506 1.1e-06 57.0 51 70.6
TWI38G1724 Tripterygium wilfordii HOM05D007708 ORTHO05D009506 1.1e-06 57.0 105 41.9
Phvul.005G084800 Phaseolus vulgaris HOM05D007708 ORTHO05D009506 1.5e-06 56.6 104 42.3
Carub.0003s1524 Capsella rubella HOM05D007708 ORTHO05D009506 1.9e-06 56.2 59 54.2
Cc05_g12520 Coffea canephora HOM05D007708 ORTHO05D009506 1.9e-06 56.2 42 66.7
Eucgr.F03340 Eucalyptus grandis HOM05D007708 ORTHO05D009506 2.5e-06 55.8 106 40.6
FAN21G3926 Fragaria x ananassa HOM05D007708 ORTHO05D009506 2.5e-06 55.8 101 44.6
FAN25G1391 Fragaria x ananassa HOM05D007708 ORTHO05D009506 2.5e-06 55.8 101 44.6
Glyma.13G280400 Glycine max HOM05D007708 ORTHO05D009506 2.5e-06 55.8 108 39.8
Lsat_1_v5_gn_5_7381 Lactuca sativa HOM05D007708 ORTHO05D009506 2.5e-06 55.8 42 66.7
Nn3g17047 Nelumbo nucifera HOM05D007708 ORTHO05D009506 2.5e-06 55.8 77 49.4
VMungo1080G0096 Vigna mungo HOM05D007708 ORTHO05D009506 2.5e-06 55.8 104 42.3
CARHR090570 Cardamine hirsuta HOM05D007708 ORTHO05D009506 3.3e-06 55.5 59 54.2
Ciclev10009880m.g Citrus clementina HOM05D007708 ORTHO05D009506 4.3e-06 55.1 121 41.3
CsaV3_3G044520 Cucumis sativus L. HOM05D007708 ORTHO05D009506 4.3e-06 55.1 84 42.9
AT3G15518 Arabidopsis thaliana HOM05D007708 ORTHO05D009506 7.4e-06 54.3 59 52.5
Gohir.A04G028100 Gossypium hirsutum HOM05D007708 ORTHO05D009506 7.4e-06 54.3 78 42.3
QL08p019254 Quercus lobata HOM05D007708 ORTHO05D009506 7.4e-06 54.3 120 39.2
Thhalv10021811m.g Eutrema salsugineum HOM05D007708 ORTHO05D009506 9.6e-06 53.9 59 54.2
Gohir.D05G360000 Gossypium hirsutum HOM05D007708 ORTHO05D009506 9.6e-06 53.9 94 39.4
Gorai.009G432700 Gossypium raimondii HOM05D007708 ORTHO05D009506 9.6e-06 53.9 94 39.4


User provided reference genes

Program Settings