Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G1818 Trochodendron aralioides HOM05D002166 ORTHO05D002634 3.2e-95 351.7 169 100.0
Nn1g03540 Nelumbo nucifera HOM05D002166 ORTHO05D002634 2.2e-48 196.1 159 61.0
Aqoxy1G02169 Aquilegia oxysepala HOM05D002166 ORTHO05D002634 1.5e-39 166.8 158 54.4
TAR624G1431 Trochodendron aralioides HOM05D002166 ORTHO05D002634 6.8e-37 157.9 116 70.7
Dinv40752 Davidia involucrata HOM05D002166 ORTHO05D002634 7.5e-36 154.5 171 52.6
MBI02_g07160_MAGBIO Magnolia biondii HOM05D002166 ORTHO05D002634 2.4e-34 149.4 159 52.8
GSVIVG01037646001 Vitis vinifera HOM05D002166 ORTHO05D002634 1.5e-28 130.2 169 43.8
CiPaw.11G189200 Carya illinoinensis HOM05D002166 ORTHO05D002634 7.5e-28 127.9 152 46.1
Cfa020346 Carpinus fangiana HOM05D002166 ORTHO05D002634 2.4e-26 122.9 146 45.9
Actinidia35343 Actinidia chinensis HOM05D002166 ORTHO05D002634 5.4e-26 121.7 165 44.2
LjContig00272g0027317 Lotus japonicus HOM05D002166 ORTHO05D002634 2.7e-25 119.4 146 44.5
PSO675G8999 Papaver somniferum HOM05D002166 ORTHO05D002634 2.7e-25 119.4 185 45.4
CDE12G0015 Ceratophyllum demersum HOM05D002166 ORTHO05D002634 4.6e-25 118.6 149 43.0
Lj8A169T85 Lonicera japonica HOM05D002166 ORTHO05D002634 6.0e-25 118.2 157 42.7
Rhsim06G0216800 Rhododendron simsii HOM05D002166 ORTHO05D002634 1.7e-24 116.7 155 42.6
Actinidia05096 Actinidia chinensis HOM05D002166 ORTHO05D002634 2.3e-24 116.3 154 42.2
Actinidia10734 Actinidia chinensis HOM05D002166 ORTHO05D002634 1.9e-23 113.2 160 41.2
CiPaw.12G129600 Carya illinoinensis HOM05D002166 ORTHO05D002634 1.9e-23 113.2 154 40.9
ECA246G2514 Erigeron canadensis HOM05D002166 ORTHO05D002634 3.3e-23 112.5 169 41.4
PSO541G1388 Papaver somniferum HOM05D002166 ORTHO05D002634 3.3e-23 112.5 185 43.8
vmacro11726 Vaccinium macrocarpon HOM05D002166 ORTHO05D002634 5.6e-23 111.7 149 46.3
Sed0016610 Sechium edule HOM05D002166 ORTHO05D002634 7.3e-23 111.3 149 41.6
Prupe.4G212500 Prunus persica HOM05D002166 ORTHO05D002634 9.5e-23 110.9 156 46.2
CsaV3_7G021790 Cucumis sativus L. HOM05D002166 ORTHO05D002634 1.2e-22 110.5 162 40.7
Lsat_1_v5_gn_5_4021 Lactuca sativa HOM05D002166 ORTHO05D002634 1.2e-22 110.5 167 42.5
GSVIVG01012735001 Vitis vinifera HOM05D002166 ORTHO05D002634 2.1e-22 109.8 163 39.9
ClCG09G010790 Citrullus lanatus HOM05D002166 ORTHO05D002634 2.8e-22 109.4 149 38.9
HanXRQChr05g0159381 Helianthus annuus HOM05D002166 ORTHO05D002634 6.2e-22 108.2 167 41.9
Actinidia36941 Actinidia chinensis HOM05D002166 ORTHO05D002634 8.0e-22 107.8 151 41.1
arahy.Tifrunner.gnm1.ann1.2WUV3V Arachis hypogaea HOM05D002166 ORTHO05D002634 1.4e-21 107.1 159 40.9
Cc05_g13700 Coffea canephora HOM05D002166 ORTHO05D002634 1.8e-21 106.7 156 42.3
CDE01G0821 Ceratophyllum demersum HOM05D002166 ORTHO05D002634 2.3e-21 106.3 151 40.4
CSS0020014 Camellia sinensis var. sinensis HOM05D002166 ORTHO05D002634 4.0e-21 105.5 157 40.1
MD03G1201300 Malus domestica HOM05D002166 ORTHO05D002634 4.0e-21 105.5 162 43.2
QL08p010329 Quercus lobata HOM05D002166 ORTHO05D002634 5.2e-21 105.1 144 42.4
arahy.Tifrunner.gnm1.ann1.MVDX5J Arachis hypogaea HOM05D002166 ORTHO05D002634 8.9e-21 104.4 159 40.9
ClCG10G005330 Citrullus lanatus HOM05D002166 ORTHO05D002634 8.9e-21 104.4 165 40.0
MD11G1218700 Malus domestica HOM05D002166 ORTHO05D002634 1.5e-20 103.6 162 43.2
PSO832G4614 Papaver somniferum HOM05D002166 ORTHO05D002634 1.5e-20 103.6 173 41.0
Lalb_Chr04g0248451 Lupinus albus HOM05D002166 ORTHO05D002634 2.0e-20 103.2 144 38.9
Sed0003386 Sechium edule HOM05D002166 ORTHO05D002634 2.0e-20 103.2 147 38.1
MELO3C025366.2 Cucumis melo HOM05D002166 ORTHO05D002634 2.6e-20 102.8 165 37.6
TWI38G0482 Tripterygium wilfordii HOM05D002166 ORTHO05D002634 2.6e-20 102.8 161 41.0
CANSAT11G1162 Cannabis sativa HOM05D002166 ORTHO05D002634 5.8e-20 101.7 171 42.7
Migut.H01828 Erythranthe guttata HOM05D002166 ORTHO05D002634 5.8e-20 101.7 166 41.0
Hma1.2p1_3160F.1_g333440 Hydrangea macrophylla HOM05D002166 ORTHO05D002634 5.8e-20 101.7 156 43.6
MSTRG.14434 Avicennia marina HOM05D002166 ORTHO05D002634 7.5e-20 101.3 150 42.0
Duzib268G1828 Durio zibethinus HOM05D002166 ORTHO05D002634 1.3e-19 100.5 153 43.1
Solyc07g064580.3 Solanum lycopersicum HOM05D002166 ORTHO05D002634 1.3e-19 100.5 165 40.6
Sopen07g032770 Solanum pennellii HOM05D002166 ORTHO05D002634 1.3e-19 100.5 165 40.6
MBI02_g24810_MAGBIO Magnolia biondii HOM05D002166 ORTHO05D002634 1.7e-19 100.1 163 42.9
FAN11G2830 Fragaria x ananassa HOM05D002166 ORTHO05D002634 2.2e-19 99.8 143 43.4
Ca_06318_v3 Cicer arietinum L. HOM05D002166 ORTHO05D002634 2.9e-19 99.4 145 43.4
Ca_30807_v3 Cicer arietinum L. HOM05D002166 ORTHO05D002634 2.9e-19 99.4 145 43.4
FAN16G1047 Fragaria x ananassa HOM05D002166 ORTHO05D002634 2.9e-19 99.4 142 43.0
HanXRQChr08g0233861 Helianthus annuus HOM05D002166 ORTHO05D002634 2.9e-19 99.4 167 41.3
Hma1.2p1_2464F.1_g322600 Hydrangea macrophylla HOM05D002166 ORTHO05D002634 2.9e-19 99.4 156 42.9
PGR083G0038 Punica granatum HOM05D002166 ORTHO05D002634 3.7e-19 99.0 147 40.1
TWI38G2284 Tripterygium wilfordii HOM05D002166 ORTHO05D002634 3.7e-19 99.0 157 39.5
CsaV3_3G005040 Cucumis sativus L. HOM05D002166 ORTHO05D002634 4.9e-19 98.6 165 35.8
Oeu042937.1 Olea europaea HOM05D002166 ORTHO05D002634 4.9e-19 98.6 157 43.3
FAN25G0402 Fragaria x ananassa HOM05D002166 ORTHO05D002634 8.3e-19 97.8 162 39.5
THA.LOC104817854 Tarenaya hassleriana HOM05D002166 ORTHO05D002634 2.4e-18 96.3 166 36.1
Manes.15G072000 Manihot esculenta HOM05D002166 ORTHO05D002634 3.2e-18 95.9 151 40.4
SGA_v2.0_scaffold18G08536 Striga asiatica HOM05D002166 ORTHO05D002634 3.2e-18 95.9 155 41.9
Thecc.07G037300 Theobroma cacao HOM05D002166 ORTHO05D002634 3.2e-18 95.9 167 39.5
Gohir.D05G369400 Gossypium hirsutum HOM05D002166 ORTHO05D002634 4.1e-18 95.5 136 44.1
Thhalv10011268m.g Eutrema salsugineum HOM05D002166 ORTHO05D002634 5.4e-18 95.1 162 34.6
FAN21G3541 Fragaria x ananassa HOM05D002166 ORTHO05D002634 5.4e-18 95.1 140 40.0
Lalb_Chr10g0106961 Lupinus albus HOM05D002166 ORTHO05D002634 7.0e-18 94.7 146 36.3
Medtr5g092610 Medicago truncatula HOM05D002166 ORTHO05D002634 7.0e-18 94.7 136 40.4
Cpa.g.sc97.2 Carica papaya HOM05D002166 ORTHO05D002634 9.2e-18 94.4 164 37.8
RcHm_v2.0_Chr5g0039421 Rosa chinensis HOM05D002166 ORTHO05D002634 1.6e-17 93.6 154 40.3
Gohir.D13G143100 Gossypium hirsutum HOM05D002166 ORTHO05D002634 2.1e-17 93.2 140 42.9
Gorai.013G160000 Gossypium raimondii HOM05D002166 ORTHO05D002634 2.1e-17 93.2 140 42.9
Nitab4.5_0001913g0130 Nicotiana tabacum HOM05D002166 ORTHO05D002634 2.1e-17 93.2 157 42.0
Glyma.18G097100 Glycine max HOM05D002166 ORTHO05D002634 2.7e-17 92.8 147 36.7
DCAR_022561 Daucus carota HOM05D002166 ORTHO05D002634 1.0e-16 90.9 127 44.1
PSO210G4122 Papaver somniferum HOM05D002166 ORTHO05D002634 1.3e-16 90.5 147 41.5
Psat2g011000 Pisum sativum HOM05D002166 ORTHO05D002634 1.3e-16 90.5 151 38.4
Gorai.009G438100 Gossypium raimondii HOM05D002166 ORTHO05D002634 1.7e-16 90.1 136 41.9
Nitab4.5_0011129g0010 Nicotiana tabacum HOM05D002166 ORTHO05D002634 1.7e-16 90.1 157 41.4
MBI18_g36060_MAGBIO Magnolia biondii HOM05D002166 ORTHO05D002634 2.3e-16 89.7 162 38.9
Gohir.A04G016800 Gossypium hirsutum HOM05D002166 ORTHO05D002634 3.9e-16 89.0 147 40.8
vmacro09716 Vaccinium macrocarpon HOM05D002166 ORTHO05D002634 3.9e-16 89.0 153 39.9
RhsimUnG0250700 Rhododendron simsii HOM05D002166 ORTHO05D002634 5.1e-16 88.6 180 34.4
PGSC0003DMG400022320 Solanum tuberosum HOM05D002166 ORTHO05D002634 6.6e-16 88.2 185 35.7
Glyma.02G290700 Glycine max HOM05D002166 ORTHO05D002634 8.6e-16 87.8 145 37.9
Sp1g37510 Schrenkiella parvula HOM05D002166 ORTHO05D002634 8.6e-16 87.8 166 32.5
TPR.G1145 Trifolium pratense HOM05D002166 ORTHO05D002634 8.6e-16 87.8 148 37.2
Glyma.14G024000 Glycine max HOM05D002166 ORTHO05D002634 1.5e-15 87.0 153 37.9
AL1G58330 Arabidopsis lyrata HOM05D002166 ORTHO05D002634 1.9e-15 86.7 165 33.3
AT1G50660 Arabidopsis thaliana HOM05D002166 ORTHO05D002634 1.9e-15 86.7 162 33.3
Phvul.008G267200 Phaseolus vulgaris HOM05D002166 ORTHO05D002634 2.5e-15 86.3 145 40.0
VMungo0647G1741 Vigna mungo HOM05D002166 ORTHO05D002634 2.5e-15 86.3 145 40.7
Aqoxy3G02385 Aquilegia oxysepala HOM05D002166 ORTHO05D002634 3.3e-15 85.9 79 57.0
Peaxi162Scf00964g00022 Petunia axillaris HOM05D002166 ORTHO05D002634 3.3e-15 85.9 160 38.1
CDE02G2372 Ceratophyllum demersum HOM05D002166 ORTHO05D002634 4.3e-15 85.5 105 46.7
Gohir.A13G138300 Gossypium hirsutum HOM05D002166 ORTHO05D002634 4.3e-15 85.5 140 40.7
Sc16g0006070 Simmondsia chinensis HOM05D002166 ORTHO05D002634 4.3e-15 85.5 130 40.0
CARHR040710 Cardamine hirsuta HOM05D002166 ORTHO05D002634 5.6e-15 85.1 163 31.3
Duzib213G0813 Durio zibethinus HOM05D002166 ORTHO05D002634 7.3e-15 84.7 153 35.9
Medtr3g051430 Medicago truncatula HOM05D002166 ORTHO05D002634 1.6e-14 83.6 153 33.3
COL.COLO4_09660 Corchorus olitorius HOM05D002166 ORTHO05D002634 1.1e-13 80.9 156 35.9
Gohir.A01G079400 Gossypium hirsutum HOM05D002166 ORTHO05D002634 1.4e-13 80.5 150 34.7
Phvul.006G042900 Phaseolus vulgaris HOM05D002166 ORTHO05D002634 1.4e-13 80.5 151 38.4
Hund01993 Selenicereus undatus HOM05D002166 ORTHO05D002634 1.4e-13 80.5 140 37.9
Nitab4.5_0006428g0010 Nicotiana tabacum HOM05D002166 ORTHO05D002634 1.8e-13 80.1 150 37.3
Gohir.D01G066400 Gossypium hirsutum HOM05D002166 ORTHO05D002634 2.3e-13 79.7 150 34.0
VMungo0540G1154 Vigna mungo HOM05D002166 ORTHO05D002634 3.1e-13 79.3 147 38.1
Eucgr.F00765 Eucalyptus grandis HOM05D002166 ORTHO05D002634 4.0e-13 79.0 150 39.3
Nitab4.5_0000981g0080 Nicotiana tabacum HOM05D002166 ORTHO05D002634 4.0e-13 79.0 150 36.7
Carub.0001s3970 Capsella rubella HOM05D002166 ORTHO05D002634 5.2e-13 78.6 168 30.4
Gorai.002G088400 Gossypium raimondii HOM05D002166 ORTHO05D002634 5.2e-13 78.6 150 34.0
MSTRG.15149 Avicennia marina HOM05D002166 ORTHO05D002634 1.5e-12 77.0 145 36.6
Gohir.D11G289500 Gossypium hirsutum HOM05D002166 ORTHO05D002634 1.5e-12 77.0 130 40.8
Gorai.007G313300 Gossypium raimondii HOM05D002166 ORTHO05D002634 1.5e-12 77.0 130 40.8
Lj6g0008473 Lotus japonicus HOM05D002166 ORTHO05D002634 1.5e-12 77.0 130 36.2
EL10Ac4g07812 Beta vulgaris HOM05D002166 ORTHO05D002634 2.0e-12 76.6 140 39.3
CDE05G0357 Ceratophyllum demersum HOM05D002166 ORTHO05D002634 4.4e-12 75.5 103 41.7
DCAR_016704 Daucus carota HOM05D002166 ORTHO05D002634 5.8e-12 75.1 144 38.2
Gohir.A11G278700 Gossypium hirsutum HOM05D002166 ORTHO05D002634 5.8e-12 75.1 130 40.0
Hma1.2p1_0673F.1_g201340 Hydrangea macrophylla HOM05D002166 ORTHO05D002634 5.8e-12 75.1 111 42.3
Lalb_Chr17g0348461 Lupinus albus HOM05D002166 ORTHO05D002634 5.8e-12 75.1 144 31.9
Sc03g0008590 Simmondsia chinensis HOM05D002166 ORTHO05D002634 1.3e-11 73.9 137 38.0
PGSC0003DMG400027878 Solanum tuberosum HOM05D002166 ORTHO05D002634 8.3e-11 71.2 147 36.1
TPR.G16591 Trifolium pratense HOM05D002166 ORTHO05D002634 1.1e-10 70.9 159 31.4
CSS0018585 Camellia sinensis var. sinensis HOM05D002166 ORTHO05D002634 1.4e-10 70.5 109 45.9
MSTRG.6918 Avicennia marina HOM05D002166 ORTHO05D002634 1.9e-10 70.1 149 35.6
BcaB07g33506 Brassica carinata HOM05D002166 ORTHO05D002634 1.9e-10 70.1 160 31.2
Ca_05515_v3 Cicer arietinum L. HOM05D002166 ORTHO05D002634 2.4e-10 69.7 148 29.7
Peaxi162Scf01097g00414 Petunia axillaris HOM05D002166 ORTHO05D002634 4.1e-10 68.9 158 36.7
C06p05920 Brassica napus HOM05D002166 ORTHO05D002634 9.2e-10 67.8 157 29.9
BcaC08g43244 Brassica carinata HOM05D002166 ORTHO05D002634 1.2e-09 67.4 157 29.3
Ah.06g186120 Amaranthus hybridus HOM05D002449 ORTHO05D003136 2.7e-09 66.2 140 37.1
Manes.03G129200 Manihot esculenta HOM05D002166 ORTHO05D002634 2.7e-09 66.2 114 36.8
Psat5g180240 Pisum sativum HOM05D002166 ORTHO05D002634 2.7e-09 66.2 159 29.6
ATR0752G109 Amborella trichopoda HOM05D002166 ORTHO05D002634 3.5e-09 65.9 85 45.9
A06p02960 Brassica napus HOM05D002166 ORTHO05D002634 4.6e-09 65.5 158 28.5
BraA06t23502Z Brassica rapa HOM05D002166 ORTHO05D002634 4.6e-09 65.5 158 28.5
Potri.011G090100 Populus trichocarpa HOM05D002166 ORTHO05D002634 1.3e-08 63.9 163 31.9
Sabra16G0235500 Salix brachista HOM05D002166 ORTHO05D002634 1.3e-08 63.9 172 29.1
Duzib192G0684 Durio zibethinus HOM05D002166 ORTHO05D002634 1.7e-08 63.5 128 33.6
Sabra11G0086500 Salix brachista HOM05D002166 ORTHO05D002634 2.3e-08 63.2 156 32.7
HPP92_014125 Vanilla planifolia HOM05D002166 ORTHO05D002634 3.9e-08 62.4 160 31.9
Aa31LG10G3670 Aethionema arabicum HOM05D002166 ORTHO05D002634 5.1e-08 62.0 116 36.2
BolC6t35705H Brassica oleracea HOM05D002166 ORTHO05D002634 5.1e-08 62.0 158 28.5
Oeu007581.1 Olea europaea HOM05D002166 ORTHO05D002634 5.1e-08 62.0 89 38.2
Aa31LG8G7170 Aethionema arabicum HOM05D002166 ORTHO05D002634 1.1e-07 60.8 97 37.1
Solyc12g005010.2 Solanum lycopersicum HOM05D002166 ORTHO05D002634 1.5e-07 60.5 146 34.2
Sopen12g001020 Solanum pennellii HOM05D002166 ORTHO05D002634 1.9e-07 60.1 146 34.2
Zm00001eb070190 Zea mays HOM05D002166 ORTHO05D002634 2.5e-07 59.7 143 32.9
A05p28560 Brassica napus HOM05D002166 ORTHO05D002634 4.3e-07 58.9 155 33.5
CAN.G1404.1 Capsicum annuum HOM05D002166 ORTHO05D002634 5.6e-07 58.5 146 30.8
Zm00001eb431290 Zea mays HOM05D002166 ORTHO05D002634 5.6e-07 58.5 129 32.6
BcaB06g26100 Brassica carinata HOM05D002166 ORTHO05D002634 7.3e-07 58.2 156 31.4
CARHR096000 Cardamine hirsuta HOM05D002166 ORTHO05D002634 7.3e-07 58.2 167 28.7
unitig_749.g13964 Utricularia gibba HOM05D002166 ORTHO05D002634 7.3e-07 58.2 159 30.2
HPP92_016529 Vanilla planifolia HOM05D002166 ORTHO05D002634 1.6e-06 57.0 121 35.5
Os04g0625000 Oryza sativa ssp. japonica HOM05D002166 ORTHO05D002634 2.1e-06 56.6 132 33.3
AUR62020445 Chenopodium quinoa HOM05D002166 ORTHO05D002634 4.7e-06 55.5 164 33.5
Sp3g18380 Schrenkiella parvula HOM05D002166 ORTHO05D002634 6.2e-06 55.1 149 30.9
BcaC05g28321 Brassica carinata HOM05D002166 ORTHO05D002634 8.1e-06 54.7 154 34.4
C05p43980 Brassica napus HOM05D002166 ORTHO05D002634 8.1e-06 54.7 154 34.4
BolC5t33116H Brassica oleracea HOM05D002166 ORTHO05D002634 8.1e-06 54.7 154 34.4
BraA05t21734Z Brassica rapa HOM05D002166 ORTHO05D002634 8.1e-06 54.7 135 32.6


User provided reference genes

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