Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G1810 Trochodendron aralioides HOM05D005029 ORTHO05D006052 1.3e-157 559.7 285 100.0
TAR383G0036 Trochodendron aralioides HOM05D005029 ORTHO05D006052 1.5e-121 439.9 288 81.2
Nn7g36649 Nelumbo nucifera HOM05D005029 ORTHO05D006052 5.8e-105 384.8 291 71.5
Dinv41171 Davidia involucrata HOM05D005029 ORTHO05D006052 9.2e-103 377.5 296 71.6
CiPaw.08G032800 Carya illinoinensis HOM05D005029 ORTHO05D006052 3.7e-96 355.5 306 66.7
Nn2g14879 Nelumbo nucifera HOM05D005029 ORTHO05D006052 1.6e-94 350.1 287 69.7
MBI13_g01742_MAGBIO Magnolia biondii HOM05D005029 ORTHO05D006052 4.6e-94 348.6 288 67.4
Haze_22015 Corylus avellana HOM05D005029 ORTHO05D006052 3.9e-93 345.5 296 67.6
Duzib170G0048 Durio zibethinus HOM05D005029 ORTHO05D006052 1.9e-92 343.2 295 66.4
Gohir.D13G213100 Gossypium hirsutum HOM05D005029 ORTHO05D006052 4.7e-91 338.6 297 67.0
Gorai.013G243400 Gossypium raimondii HOM05D005029 ORTHO05D006052 4.7e-91 338.6 297 67.0
MBI19_g21652_MAGBIO Magnolia biondii HOM05D005029 ORTHO05D006052 8.1e-91 337.8 271 66.4
Cfa013448 Carpinus fangiana HOM05D005029 ORTHO05D006052 1.8e-90 336.7 296 66.9
Aqoxy7G02787 Aquilegia oxysepala HOM05D005029 ORTHO05D006052 1.2e-89 334.0 262 71.0
Thecc.09G185600 Theobroma cacao HOM05D005029 ORTHO05D006052 5.8e-89 331.6 298 65.4
CiPaw.07G196600 Carya illinoinensis HOM05D005029 ORTHO05D006052 7.5e-89 331.3 299 64.2
COL.COLO4_08419 Corchorus olitorius HOM05D005029 ORTHO05D006052 9.9e-89 330.9 273 67.0
Gohir.A13G208700 Gossypium hirsutum HOM05D005029 ORTHO05D006052 9.9e-89 330.9 297 66.3
PSO170G2568 Papaver somniferum HOM05D005029 ORTHO05D006052 2.2e-88 329.7 295 64.1
PSO063G5693 Papaver somniferum HOM05D005029 ORTHO05D006052 3.7e-88 328.9 297 65.0
Duzib150G1033 Durio zibethinus HOM05D005029 ORTHO05D006052 4.9e-88 328.6 296 65.2
Cpa.g.c27842.2 Carica papaya HOM05D005029 ORTHO05D006052 1.1e-87 327.4 302 63.6
CANSAT11G1104 Cannabis sativa HOM05D005029 ORTHO05D006052 7.3e-84 314.7 301 63.5
Dinv25437 Davidia involucrata HOM05D005029 ORTHO05D006052 6.2e-83 311.6 272 67.3
Prupe.1G076300 Prunus persica HOM05D005029 ORTHO05D006052 8.1e-83 311.2 301 60.8
MD16G1249500 Malus domestica HOM05D005029 ORTHO05D006052 4.0e-82 308.9 298 60.1
Potri.006G075900 Populus trichocarpa HOM05D005029 ORTHO05D006052 1.2e-81 307.4 300 61.7
TWI34G0612 Tripterygium wilfordii HOM05D005029 ORTHO05D006052 1.2e-81 307.4 295 64.1
GSVIVG01010867001 Vitis vinifera HOM05D005029 ORTHO05D006052 3.4e-81 305.8 295 61.0
Manes.06G020200 Manihot esculenta HOM05D005029 ORTHO05D006052 4.4e-81 305.4 299 60.5
Glyma.15G165600 Glycine max HOM05D005029 ORTHO05D006052 8.4e-80 301.2 275 64.7
Glyma.09G059300 Glycine max HOM05D005029 ORTHO05D006052 1.2e-78 297.4 293 61.8
AUR62021347 Chenopodium quinoa HOM05D005029 ORTHO05D006052 1.6e-78 297.0 296 56.8
TWI32G0396 Tripterygium wilfordii HOM05D005029 ORTHO05D006052 2.1e-78 296.6 302 61.3
EL10Ac8g18332 Beta vulgaris HOM05D005029 ORTHO05D006052 1.3e-77 293.9 292 57.5
Peaxi162Scf01600g00016 Petunia axillaris HOM05D005029 ORTHO05D006052 1.7e-77 293.5 298 59.1
Actinidia01279 Actinidia chinensis HOM05D005029 ORTHO05D006052 8.7e-77 291.2 300 59.7
AUR62033261 Chenopodium quinoa HOM05D005029 ORTHO05D006052 1.5e-76 290.4 297 56.6
MSTRG.26542 Avicennia marina HOM05D005029 ORTHO05D006052 9.6e-76 287.7 296 57.8
Nitab4.5_0000617g0020 Nicotiana tabacum HOM05D005029 ORTHO05D006052 9.6e-76 287.7 304 57.9
Phvul.009G236500 Phaseolus vulgaris HOM05D005029 ORTHO05D006052 3.6e-75 285.8 291 59.8
THA.LOC104803957 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 4.7e-75 285.4 297 57.6
THA.LOC104803983 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 4.7e-75 285.4 297 57.6
Potri.018G143000 Populus trichocarpa HOM05D005029 ORTHO05D006052 8.1e-75 284.6 293 58.4
QL02p046501 Quercus lobata HOM05D005029 ORTHO05D006052 1.4e-74 283.9 404 48.5
Lj6g0016757 Lotus japonicus HOM05D005029 ORTHO05D006052 2.4e-74 283.1 282 60.3
Medtr2g037940 Medicago truncatula HOM05D005029 ORTHO05D006052 2.4e-74 283.1 297 59.3
Lalb_Chr11g0074801 Lupinus albus HOM05D005029 ORTHO05D006052 4.0e-74 282.3 290 59.7
Solyc07g008780.3 Solanum lycopersicum HOM05D005029 ORTHO05D006052 9.0e-74 281.2 297 56.9
Sabra06G0056600 Salix brachista HOM05D005029 ORTHO05D006052 1.2e-73 280.8 320 56.9
Cc00_g10760 Coffea canephora HOM05D005029 ORTHO05D006052 2.6e-73 279.6 280 59.3
Carub.0007s1068 Capsella rubella HOM05D005029 ORTHO05D006052 9.9e-73 277.7 298 58.4
VMungo1309G1415 Vigna mungo HOM05D005029 ORTHO05D006052 9.9e-73 277.7 293 59.7
FvH4_4g07340 Fragaria vesca HOM05D005029 ORTHO05D006052 1.7e-72 276.9 288 56.2
Sopen07g004720 Solanum pennellii HOM05D005029 ORTHO05D006052 2.9e-72 276.2 297 56.6
AL7G22280 Arabidopsis lyrata HOM05D005029 ORTHO05D006052 4.9e-72 275.4 296 59.5
CARHR237880 Cardamine hirsuta HOM05D005029 ORTHO05D006052 4.9e-72 275.4 298 58.1
RcHm_v2.0_Chr4g0399711 Rosa chinensis HOM05D005029 ORTHO05D006052 4.9e-72 275.4 301 54.8
Ah.09g230060 Amaranthus hybridus HOM05D005029 ORTHO05D006052 6.4e-72 275.0 304 53.0
Psat1g145480 Pisum sativum HOM05D005029 ORTHO05D006052 8.4e-72 274.6 261 60.9
Ah.14g083530 Amaranthus hybridus HOM05D005029 ORTHO05D006052 1.1e-71 274.2 296 53.7
PGSC0003DMG400028729 Solanum tuberosum HOM05D005029 ORTHO05D006052 1.4e-71 273.9 297 55.9
FAN12G1304 Fragaria x ananassa HOM05D005029 ORTHO05D006052 3.2e-71 272.7 286 55.9
Eucgr.C00120 Eucalyptus grandis HOM05D005029 ORTHO05D006052 5.4e-71 271.9 299 57.5
Sed0026503 Sechium edule HOM05D005029 ORTHO05D006052 5.4e-71 271.9 302 57.3
Thhalv10025919m.g Eutrema salsugineum HOM05D005029 ORTHO05D006052 7.1e-71 271.6 296 57.8
HanXRQChr13g0426591 Helianthus annuus HOM05D005029 ORTHO05D006052 1.6e-70 270.4 300 55.7
FAN07G2409 Fragaria x ananassa HOM05D005029 ORTHO05D006052 2.1e-70 270.0 263 57.4
Sabra18G0116800 Salix brachista HOM05D005029 ORTHO05D006052 2.7e-70 269.6 295 56.3
AT4G29960 Arabidopsis thaliana HOM05D005029 ORTHO05D006052 4.6e-70 268.9 298 58.1
Nitab4.5_0008862g0020 Nicotiana tabacum HOM05D005029 ORTHO05D006052 4.6e-70 268.9 303 54.8
Hund26310 Selenicereus undatus HOM05D005029 ORTHO05D006052 4.6e-70 268.9 298 54.7
Ciclev10009010m.g Citrus clementina HOM05D005029 ORTHO05D006052 7.8e-70 268.1 270 57.4
Ca_02102_v3 Cicer arietinum L. HOM05D005029 ORTHO05D006052 1.0e-69 267.7 292 57.2
FAN17G0071 Fragaria x ananassa HOM05D005029 ORTHO05D006052 1.7e-69 266.9 306 53.9
FAN22G0020 Fragaria x ananassa HOM05D005029 ORTHO05D006052 3.0e-69 266.2 284 53.5
Sp7g27770 Schrenkiella parvula HOM05D005029 ORTHO05D006052 3.0e-69 266.2 297 57.9
DCAR_030818 Daucus carota HOM05D005029 ORTHO05D006052 3.9e-69 265.8 268 58.2
THA.LOC104814654 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 3.9e-69 265.8 301 56.1
Oeu034799.1 Olea europaea HOM05D005029 ORTHO05D006052 4.3e-68 262.3 249 59.8
Atru.chr7.763 Acer truncatum HOM05D005029 ORTHO05D006052 9.6e-68 261.2 299 55.2
Atru.chr7.783 Acer truncatum HOM05D005029 ORTHO05D006052 9.6e-68 261.2 299 55.2
arahy.Tifrunner.gnm1.ann1.K38ATV Arachis hypogaea HOM05D005029 ORTHO05D006052 2.1e-67 260.0 284 57.0
Lsat_1_v5_gn_3_137280 Lactuca sativa HOM05D005029 ORTHO05D006052 2.1e-67 260.0 261 59.8
TPR.G7936 Trifolium pratense HOM05D005029 ORTHO05D006052 8.1e-67 258.1 301 55.5
MELO3C017433.2 Cucumis melo HOM05D005029 ORTHO05D006052 1.8e-66 256.9 305 54.1
Aa31LG2G20590 Aethionema arabicum HOM05D005029 ORTHO05D006052 6.9e-66 255.0 296 55.4
SGA_v2.0_scaffold31G12759 Striga asiatica HOM05D005029 ORTHO05D006052 7.6e-65 251.5 299 55.2
BolC3t21207H Brassica oleracea HOM05D005029 ORTHO05D006052 2.9e-64 249.6 302 55.0
CsaV3_1G031840 Cucumis sativus L. HOM05D005029 ORTHO05D006052 1.1e-63 247.7 260 58.8
Sc16g0010440 Simmondsia chinensis HOM05D005029 ORTHO05D006052 4.2e-63 245.7 281 54.1
ATR0626G110 Amborella trichopoda HOM05D005029 ORTHO05D006052 7.1e-63 245.0 306 52.3
BcaC01g01206 Brassica carinata HOM05D005029 ORTHO05D006052 6.0e-62 241.9 303 53.8
BraA08t33909Z Brassica rapa HOM05D005029 ORTHO05D006052 2.8e-59 233.0 296 52.7
Lalb_Chr13g0300031 Lupinus albus HOM05D005029 ORTHO05D006052 1.1e-58 231.1 276 56.9
CSS0012939 Camellia sinensis var. sinensis HOM05D005029 ORTHO05D006052 5.3e-58 228.8 307 52.4
Migut.L01885 Erythranthe guttata HOM05D005029 ORTHO05D006052 1.5e-57 227.3 301 52.5
BcaNung00506 Brassica carinata HOM05D005029 ORTHO05D006052 2.6e-57 226.5 294 55.1
A08p19470 Brassica napus HOM05D005029 ORTHO05D006052 2.6e-57 226.5 297 50.5
Oeu044675.2 Olea europaea HOM05D005029 ORTHO05D006052 2.6e-57 226.5 298 49.3
CDE04G3679 Ceratophyllum demersum HOM05D005029 ORTHO05D006052 3.8e-56 222.6 284 47.5
ClCG06G013560 Citrullus lanatus HOM05D005029 ORTHO05D006052 6.4e-56 221.9 274 52.6
ECA240G3783 Erigeron canadensis HOM05D005029 ORTHO05D006052 1.9e-55 220.3 230 57.8
CDE02G0552 Ceratophyllum demersum HOM05D005029 ORTHO05D006052 2.7e-54 216.5 283 48.1
SHI09006 Sapria himalayana HOM05D005029 ORTHO05D006052 3.5e-54 216.1 267 49.8
BcaC07g37961 Brassica carinata HOM05D005029 ORTHO05D006052 5.6e-52 208.8 292 51.4
C03p88970 Brassica napus HOM05D005029 ORTHO05D006052 9.6e-52 208.0 259 51.7
PGR142G1735 Punica granatum HOM05D005029 ORTHO05D006052 9.6e-52 208.0 266 54.1
BcaC09g51777 Brassica carinata HOM05D000106 ORTHO05D000160 1.8e-50 203.8 253 53.8
BraA01t00761Z Brassica rapa HOM05D005029 ORTHO05D006052 3.1e-50 203.0 302 50.3
BcaC09g51764 Brassica carinata HOM05D005029 ORTHO05D006052 3.4e-49 199.5 304 50.0
unitig_699.g19404 Utricularia gibba HOM05D005029 ORTHO05D006052 7.6e-49 198.4 287 45.3
arahy.Tifrunner.gnm1.ann1.J7B49U Arachis hypogaea HOM05D005029 ORTHO05D006052 1.0e-48 198.0 162 69.1
A01p08140 Brassica napus HOM05D005029 ORTHO05D006052 1.7e-48 197.2 295 49.2
unitig_27.g24759 Utricularia gibba HOM05D005029 ORTHO05D006052 1.7e-48 197.2 299 46.2
C01p09110 Brassica napus HOM05D005029 ORTHO05D006052 3.2e-47 193.0 254 53.1
BolC1t00902H Brassica oleracea HOM05D005029 ORTHO05D006052 3.2e-47 193.0 306 48.4
HPP92_004703 Vanilla planifolia HOM05D005029 ORTHO05D006052 6.0e-46 188.7 236 50.8
Zm00001eb071460 Zea mays HOM05D005029 ORTHO05D006052 1.6e-43 180.6 256 46.9
Os04g0606800 Oryza sativa ssp. japonica HOM05D005029 ORTHO05D006052 2.0e-41 173.7 244 47.1
Migut.J00802 Erythranthe guttata HOM05D005029 ORTHO05D006052 5.9e-41 172.2 297 41.8
Mapoly0076s0086 Marchantia polymorpha HOM05D005029 ORTHO05D006052 2.2e-40 170.2 302 37.7
Zm00001eb430500 Zea mays HOM05D005029 ORTHO05D006052 5.5e-39 165.6 257 44.4
AagrBONN_evm.TU.Sc2ySwM_368.2110 Anthoceros agrestis HOM05D005029 ORTHO05D006052 6.1e-38 162.2 308 38.3
SEGI_23735 Sequoiadendron giganteum HOM05D005029 ORTHO05D006052 3.0e-37 159.8 279 41.6
C07p57380 Brassica napus HOM05D005029 ORTHO05D006052 2.5e-36 156.8 185 56.2
Lj5A672T26 Lonicera japonica HOM05D005029 ORTHO05D006052 3.7e-35 152.9 167 56.9
Duzib168G1982 Durio zibethinus HOM05D005029 ORTHO05D006052 5.3e-34 149.1 154 61.0
SMO358G0278 Selaginella moellendorffii HOM05D005029 ORTHO05D006052 6.1e-30 135.6 269 39.8
Rhsim01G0118000 Rhododendron simsii HOM05D005029 ORTHO05D006052 1.4e-29 134.4 223 40.4
Pp3c9_8340 Physcomitrium patens HOM05D005029 ORTHO05D006052 1.1e-28 131.3 280 35.4
A03p59350 Brassica napus HOM05D005029 ORTHO05D006052 2.4e-26 123.6 265 37.7
BcaC05g25672 Brassica carinata HOM05D005029 ORTHO05D006052 2.6e-25 120.2 216 44.4
BcaB06g28011 Brassica carinata HOM05D005029 ORTHO05D006052 2.5e-23 113.6 99 65.7
vmacro20818 Vaccinium macrocarpon HOM05D005029 ORTHO05D006052 8.8e-21 105.1 86 61.6
BolC6t39910H Brassica oleracea HOM05D005029 ORTHO05D006052 6.3e-19 99.0 153 43.8
Aqoxy377s001 Aquilegia oxysepala HOM05D005029 ORTHO05D006052 3.5e-17 93.2 74 64.9
Lj5C672T2 Lonicera japonica HOM05D005029 ORTHO05D006052 1.8e-13 80.9 57 68.4
Aa31LG8G16260 Aethionema arabicum HOM05D005029 ORTHO05D006052 7.5e-12 75.5 86 51.2
BcaB04g18770 Brassica carinata HOM05D005029 ORTHO05D006052 7.5e-12 75.5 71 67.6
BolC5t30251H Brassica oleracea HOM05D005029 ORTHO05D006052 1.7e-11 74.3 92 48.9
MBI13_g34035_MAGBIO Magnolia biondii HOM05D005029 ORTHO05D006052 3.7e-11 73.2 95 47.4
BcaB06g26390 Brassica carinata HOM05D005029 ORTHO05D006052 3.1e-10 70.1 113 46.0
CBR_g52634 Chara braunii HOM05D005029 ORTHO05D006052 9.1e-10 68.6 117 41.0
Pp3c9_14880 Physcomitrium patens HOM05D005029 ORTHO05D006052 8.5e-08 62.0 118 36.4


User provided reference genes

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