Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G1807 Trochodendron aralioides HOM05D006758 ORTHO05D008326 1.0e-93 346.7 164 100.0
Rhsim02G0111700 Rhododendron simsii HOM05D006758 ORTHO05D008326 1.0e-50 203.8 95 96.8
TPR.G5478 Trifolium pratense HOM05D006758 ORTHO05D008326 1.0e-50 203.8 95 95.8
TAR624G0544 Trochodendron aralioides HOM05D006758 ORTHO05D008326 1.8e-50 203.0 95 96.8
Phvul.007G052700 Phaseolus vulgaris HOM05D006758 ORTHO05D008326 3.0e-50 202.2 95 95.8
CiPaw.09G087600 Carya illinoinensis HOM05D006758 ORTHO05D008326 4.0e-50 201.8 95 95.8
Ca_10997_v3 Cicer arietinum L. HOM05D006758 ORTHO05D008326 4.0e-50 201.8 95 94.7
Dinv20021 Davidia involucrata HOM05D006758 ORTHO05D008326 6.8e-50 201.1 95 93.7
Lj5g0020351 Lotus japonicus HOM05D006758 ORTHO05D008326 8.9e-50 200.7 95 93.7
arahy.Tifrunner.gnm1.ann1.ND4ZK6 Arachis hypogaea HOM05D006758 ORTHO05D008326 1.2e-49 200.3 95 94.7
Hma1.2p1_2714F.1_g327410 Hydrangea macrophylla HOM05D006758 ORTHO05D008326 1.2e-49 200.3 95 93.7
Nn1g03624 Nelumbo nucifera HOM05D006758 ORTHO05D008326 1.2e-49 200.3 95 94.7
Psat0s2691g0120 Pisum sativum HOM05D006758 ORTHO05D008326 1.2e-49 200.3 95 93.7
EL10Ac8g19995 Beta vulgaris HOM05D006758 ORTHO05D008326 1.5e-49 199.9 95 94.7
MD05G1341600 Malus domestica HOM05D006758 ORTHO05D008326 1.5e-49 199.9 95 94.7
Prupe.4G025700 Prunus persica HOM05D006758 ORTHO05D008326 1.5e-49 199.9 95 94.7
Hma1.2p1_2726F.1_g327620 Hydrangea macrophylla HOM05D006758 ORTHO05D008326 2.6e-49 199.1 95 93.7
SGA_v2.0_scaffold7G03879 Striga asiatica HOM05D006758 ORTHO05D008326 2.6e-49 199.1 95 93.7
GSVIVG01012634001 Vitis vinifera HOM05D006758 ORTHO05D008326 3.4e-49 198.7 95 93.7
CDE05G3555 Ceratophyllum demersum HOM05D006758 ORTHO05D008326 5.7e-49 198.0 95 93.7
Lalb_Chr06g0164881 Lupinus albus HOM05D006758 ORTHO05D008326 5.7e-49 198.0 95 93.7
Nitab4.5_0002347g0160 Nicotiana tabacum HOM05D006758 ORTHO05D008326 5.7e-49 198.0 95 93.7
Nitab4.5_0008530g0010 Nicotiana tabacum HOM05D006758 ORTHO05D008326 5.7e-49 198.0 95 93.7
MD10G1315000 Malus domestica HOM05D006758 ORTHO05D008326 7.5e-49 197.6 95 92.6
Sabra04G0011700 Salix brachista HOM05D006758 ORTHO05D008326 9.8e-49 197.2 95 93.7
Glyma.10G251800 Glycine max HOM05D006758 ORTHO05D008326 1.3e-48 196.8 95 92.6
Glyma.20G141700 Glycine max HOM05D006758 ORTHO05D008326 1.3e-48 196.8 95 92.6
Oeu037351.1 Olea europaea HOM05D006758 ORTHO05D008326 1.3e-48 196.8 95 92.6
PGR004G2441 Punica granatum HOM05D006758 ORTHO05D008326 1.3e-48 196.8 95 93.7
DCAR_008127 Daucus carota HOM05D006758 ORTHO05D008326 1.7e-48 196.4 95 92.6
ECA234G0861 Erigeron canadensis HOM05D006758 ORTHO05D008326 1.7e-48 196.4 95 92.6
Lsat_1_v5_gn_4_59120 Lactuca sativa HOM05D006758 ORTHO05D008326 1.7e-48 196.4 95 93.7
Potri.004G021200 Populus trichocarpa HOM05D006758 ORTHO05D008326 1.7e-48 196.4 95 92.6
CANSAT56G2354 Cannabis sativa HOM05D006758 ORTHO05D008326 2.2e-48 196.1 95 92.6
MELO3C007373.2 Cucumis melo HOM05D006758 ORTHO05D008326 2.2e-48 196.1 95 92.6
CsaV3_6G049220 Cucumis sativus L. HOM05D006758 ORTHO05D008326 2.2e-48 196.1 95 92.6
Sed0024295 Sechium edule HOM05D006758 ORTHO05D008326 2.2e-48 196.1 95 93.7
Ciclev10017296m.g Citrus clementina HOM05D006758 ORTHO05D008326 2.8e-48 195.7 95 91.6
HanXRQChr16g0515881 Helianthus annuus HOM05D006758 ORTHO05D008326 2.8e-48 195.7 95 92.6
Migut.M01286 Erythranthe guttata HOM05D006758 ORTHO05D008326 3.7e-48 195.3 95 91.6
THA.LOC104809516 Tarenaya hassleriana HOM05D006758 ORTHO05D008326 3.7e-48 195.3 95 92.6
ATR0661G232 Amborella trichopoda HOM05D006758 ORTHO05D008326 4.9e-48 194.9 95 89.5
COL.COLO4_31733 Corchorus olitorius HOM05D006758 ORTHO05D008326 4.9e-48 194.9 95 91.6
CAN.G569.41 Capsicum annuum HOM05D006758 ORTHO05D008326 6.3e-48 194.5 95 91.6
Eucgr.D01293 Eucalyptus grandis HOM05D006758 ORTHO05D008326 6.3e-48 194.5 95 92.6
Solyc02g080140.4 Solanum lycopersicum HOM05D006758 ORTHO05D008326 6.3e-48 194.5 95 91.6
Sopen02g024850 Solanum pennellii HOM05D006758 ORTHO05D008326 6.3e-48 194.5 95 91.6
Gohir.A09G069700 Gossypium hirsutum HOM05D006758 ORTHO05D008326 1.1e-47 193.7 95 91.6
Gohir.D09G069600 Gossypium hirsutum HOM05D006758 ORTHO05D008326 1.1e-47 193.7 95 91.6
Gohir.A06G207900 Gossypium hirsutum HOM05D006758 ORTHO05D008326 1.4e-47 193.4 95 90.5
Gorai.010G252900 Gossypium raimondii HOM05D006758 ORTHO05D008326 1.4e-47 193.4 95 90.5
PSO210G7269 Papaver somniferum HOM05D006758 ORTHO05D008326 1.4e-47 193.4 95 90.5
PSO832G0089 Papaver somniferum HOM05D006758 ORTHO05D008326 1.4e-47 193.4 95 90.5
TWI38G0518 Tripterygium wilfordii HOM05D006758 ORTHO05D008326 1.4e-47 193.4 95 91.6
Cc02_g11670 Coffea canephora HOM05D006758 ORTHO05D008326 1.8e-47 193.0 99 89.9
Duzib235G1228 Durio zibethinus HOM05D006758 ORTHO05D008326 1.8e-47 193.0 95 90.5
Actinidia11840 Actinidia chinensis HOM05D006758 ORTHO05D008326 3.1e-47 192.2 95 91.6
Manes.17G035700 Manihot esculenta HOM05D006758 ORTHO05D008326 3.1e-47 192.2 95 90.5
RcHm_v2.0_Chr5g0003931 Rosa chinensis HOM05D006758 ORTHO05D008326 3.1e-47 192.2 98 90.8
arahy.Tifrunner.gnm1.ann1.GJ8XD1 Arachis hypogaea HOM05D006758 ORTHO05D008326 4.1e-47 191.8 106 84.9
DCAR_004197 Daucus carota HOM05D006758 ORTHO05D008326 4.1e-47 191.8 97 90.7
Thecc.06G214600 Theobroma cacao HOM05D006758 ORTHO05D008326 4.1e-47 191.8 95 88.4
AUR62022003 Chenopodium quinoa HOM05D006758 ORTHO05D008326 5.4e-47 191.4 95 90.5
Duzib192G0534 Durio zibethinus HOM05D006758 ORTHO05D008326 5.4e-47 191.4 95 89.5
Thhalv10023778m.g Eutrema salsugineum HOM05D006758 ORTHO05D008326 5.4e-47 191.4 97 89.7
Zm00001eb413280 Zea mays HOM05D006758 ORTHO05D008326 5.4e-47 191.4 95 91.6
BcaC04g22349 Brassica carinata HOM05D006758 ORTHO05D008326 7.0e-47 191.0 97 89.7
C09p20260 Brassica napus HOM05D006758 ORTHO05D008326 7.0e-47 191.0 97 89.7
BolC9t54931H Brassica oleracea HOM05D006758 ORTHO05D008326 7.0e-47 191.0 97 89.7
Carub.0002s0329 Capsella rubella HOM05D006758 ORTHO05D008326 7.0e-47 191.0 97 89.7
Os08g0190800 Oryza sativa ssp. japonica HOM05D006758 ORTHO05D008326 7.0e-47 191.0 95 90.5
BcaB07g31284 Brassica carinata HOM05D006758 ORTHO05D008326 1.2e-46 190.3 97 89.7
A09p16650 Brassica napus HOM05D006758 ORTHO05D008326 1.2e-46 190.3 97 89.7
BraA09t37304Z Brassica rapa HOM05D006758 ORTHO05D008326 1.2e-46 190.3 97 89.7
CARHR050560 Cardamine hirsuta HOM05D006758 ORTHO05D008326 1.2e-46 190.3 97 89.7
FvH4_3g02640 Fragaria vesca HOM05D006758 ORTHO05D008326 1.2e-46 190.3 98 89.8
Pp3c2_14210 Physcomitrium patens HOM05D006758 ORTHO05D008326 1.2e-46 190.3 95 90.5
Sp2g02770 Schrenkiella parvula HOM05D006758 ORTHO05D008326 1.6e-46 189.9 97 88.7
Aa31LG1G3210 Aethionema arabicum HOM05D006758 ORTHO05D008326 2.0e-46 189.5 97 88.7
BcaB04g20373 Brassica carinata HOM05D006758 ORTHO05D008326 4.5e-46 188.3 97 87.6
AL2G14330 Arabidopsis lyrata HOM05D006758 ORTHO05D008326 1.0e-45 187.2 97 87.6
AT1G61780 Arabidopsis thaliana HOM05D006758 ORTHO05D008326 1.0e-45 187.2 97 87.6
unitig_61.g26114 Utricularia gibba HOM05D006758 ORTHO05D008326 5.0e-45 184.9 121 73.6
Mapoly0102s0010 Marchantia polymorpha HOM05D006758 ORTHO05D008326 8.6e-45 184.1 95 85.3
ClCG01G022160 Citrullus lanatus HOM05D006758 ORTHO05D008326 1.1e-44 183.7 99 86.9
Sabra11G0016800 Salix brachista HOM05D006758 ORTHO05D008326 1.1e-44 183.7 95 87.4
Dinv17829 Davidia involucrata HOM05D006758 ORTHO05D008326 1.9e-44 183.0 89 92.1
Oeu051222.1 Olea europaea HOM05D006758 ORTHO05D008326 1.2e-43 180.3 89 89.9
Gorai.006G083800 Gossypium raimondii HOM05D006758 ORTHO05D008326 1.6e-43 179.9 89 91.0
AagrBONN_evm.TU.Sc2ySwM_344.4905 Anthoceros agrestis HOM05D006758 ORTHO05D008326 2.1e-43 179.5 95 83.2
SHI02162 Sapria himalayana HOM05D006758 ORTHO05D008326 3.0e-42 175.6 93 83.9
CSS0030244 Camellia sinensis var. sinensis HOM05D006758 ORTHO05D008326 2.9e-40 169.1 81 92.6
SMO351G0293 Selaginella moellendorffii HOM05D006758 ORTHO05D008326 7.0e-39 164.5 88 80.7
Peaxi162Scf00082g10217 Petunia axillaris HOM05D006758 ORTHO05D008326 6.0e-38 161.4 97 80.4
Ah.09g235270 Amaranthus hybridus HOM05D006758 ORTHO05D008326 1.7e-37 159.8 81 87.7
CBR_g45280 Chara braunii HOM05D006758 ORTHO05D008326 1.1e-36 157.1 90 77.8
Sc17g0007080 Simmondsia chinensis HOM05D006758 ORTHO05D008326 1.4e-34 150.2 75 89.3
MCO09G771 Micromonas commoda HOM05D006758 ORTHO05D008326 3.1e-26 122.5 95 56.8
Cre16.g670200 Chlamydomonas reinhardtii HOM05D006758 ORTHO05D008326 2.0e-25 119.8 95 56.8
Hund23506 Selenicereus undatus HOM05D006758 ORTHO05D008326 2.6e-25 119.4 62 87.1
Haze_06744 Corylus avellana HOM05D006758 ORTHO05D008326 3.4e-17 92.4 46 93.5
A01p30660 Brassica napus HOM05D006758 ORTHO05D008326 1.7e-16 90.1 41 92.7
Cre16.g689376 Chlamydomonas reinhardtii HOM05D006758 ORTHO05D008326 1.7e-16 90.1 103 43.7
MBI02_g21861_MAGBIO Magnolia biondii HOM05D006758 ORTHO05D008326 1.7e-16 90.1 44 95.5
QL05p074940 Quercus lobata HOM05D006758 ORTHO05D008326 1.7e-16 90.1 46 91.3
QL93p0073_0472 Quercus lobata HOM05D006758 ORTHO05D008326 1.7e-16 90.1 46 91.3
FAN25G0357 Fragaria x ananassa HOM05D006758 ORTHO05D008326 2.9e-16 89.4 45 93.3
vmacro15829 Vaccinium macrocarpon HOM05D006758 ORTHO05D008326 3.8e-16 89.0 44 95.5
A01p30680 Brassica napus HOM05D006758 ORTHO05D008326 6.4e-16 88.2 41 90.2
BraA01t03197Z Brassica rapa HOM05D006758 ORTHO05D008326 6.4e-16 88.2 41 90.2
HPP92_000849 Vanilla planifolia HOM05D006758 ORTHO05D008326 6.4e-16 88.2 43 95.3
SalBow1G3298 Salvia bowleyana HOM05D006758 ORTHO05D008326 1.4e-15 87.0 45 91.1
FAN21G3907 Fragaria x ananassa HOM05D006758 ORTHO05D008326 1.9e-15 86.7 48 87.5
Ah.14g088140 Amaranthus hybridus HOM05D000097 ORTHO05D000041 3.2e-15 85.9 45 88.9
MBI16_g27830_MAGBIO Magnolia biondii HOM05D004176 ORTHO05D008326 1.3e-13 80.5 50 74.0
Gohir.D06G213300 Gossypium hirsutum HOM05D006758 ORTHO05D008326 3.0e-13 79.3 40 87.5
MBI15_g03894_MAGBIO Magnolia biondii HOM05D006758 ORTHO05D008326 8.7e-13 77.8 50 72.0
Atru.BG.309.p Acer truncatum HOM05D006758 ORTHO05D008326 3.3e-12 75.9 39 92.3
PGSC0003DMG400002083 Solanum tuberosum HOM05D006758 ORTHO05D008326 1.5e-09 67.0 32 90.6


User provided reference genes

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