Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G1585 Trochodendron aralioides HOM05D005126 ORTHO05D006169 7.9e-250 866.7 454 100.0
TAR624G1039 Trochodendron aralioides HOM05D005126 ORTHO05D006169 8.8e-140 501.1 493 60.6
Dinv17855 Davidia involucrata HOM05D005126 ORTHO05D006169 1.0e-87 328.2 495 44.4
Nn1g03751 Nelumbo nucifera HOM05D005126 ORTHO05D006169 2.1e-77 293.9 493 45.4
Haze_06662 Corylus avellana HOM05D005126 ORTHO05D006169 3.4e-75 286.6 500 44.2
Cfa000280 Carpinus fangiana HOM05D005126 ORTHO05D006169 1.6e-69 267.7 500 42.6
Potri.004G030500 Populus trichocarpa HOM05D005126 ORTHO05D006169 1.5e-67 261.2 536 36.4
Ciclev10007263m.g Citrus clementina HOM05D005126 ORTHO05D006169 8.4e-66 255.4 476 40.3
QL05p077365 Quercus lobata HOM05D005126 ORTHO05D006169 3.2e-65 253.4 498 39.2
CiPaw.09G152800 Carya illinoinensis HOM05D005126 ORTHO05D006169 1.0e-63 248.4 497 40.4
Atru.chr10.2052 Acer truncatum HOM05D005126 ORTHO05D006169 2.2e-58 230.7 407 41.3
Prupe.4G030200 Prunus persica HOM05D005126 ORTHO05D006169 1.4e-57 228.0 496 37.9
Duzib192G0985 Durio zibethinus HOM05D005126 ORTHO05D006169 7.1e-57 225.7 501 37.3
Gohir.A10G017400 Gossypium hirsutum HOM05D005126 ORTHO05D006169 1.6e-56 224.6 440 39.3
FAN21G2838 Fragaria x ananassa HOM05D005126 ORTHO05D006169 3.0e-55 220.3 441 42.9
COL.COLO4_33008 Corchorus olitorius HOM05D005126 ORTHO05D006169 3.9e-55 219.9 493 37.3
RcHm_v2.0_Chr5g0004701 Rosa chinensis HOM05D005126 ORTHO05D006169 3.9e-55 219.9 436 39.9
FvH4_3g03041 Fragaria vesca HOM05D005126 ORTHO05D006169 6.7e-55 219.2 441 42.9
TWI63G0986 Tripterygium wilfordii HOM05D005126 ORTHO05D006169 8.7e-55 218.8 499 37.9
Thecc.06G207200 Theobroma cacao HOM05D005126 ORTHO05D006169 1.6e-53 214.5 459 37.9
MD05G1335200 Malus domestica HOM05D005126 ORTHO05D006169 1.2e-51 208.4 485 37.7
Lalb_Chr09g0327171 Lupinus albus HOM05D005126 ORTHO05D006169 2.0e-51 207.6 476 35.9
CANSAT35G0768 Cannabis sativa HOM05D005126 ORTHO05D006169 2.6e-51 207.2 485 37.1
Potri.011G032200 Populus trichocarpa HOM05D005126 ORTHO05D006169 8.7e-47 192.2 527 32.6
Glyma.07G187500 Glycine max HOM05D005126 ORTHO05D006169 1.5e-46 191.4 461 34.7
Lj4g0001880 Lotus japonicus HOM05D005126 ORTHO05D006169 2.5e-46 190.7 489 33.9
Duzib160G0882 Durio zibethinus HOM05D005126 ORTHO05D006169 7.4e-46 189.1 500 35.6
Gohir.D06G212500 Gossypium hirsutum HOM05D005126 ORTHO05D006169 2.1e-45 187.6 439 36.4
Medtr4g092040 Medicago truncatula HOM05D005126 ORTHO05D006169 2.1e-45 187.6 448 34.8
Phvul.002G219000 Phaseolus vulgaris HOM05D005126 ORTHO05D006169 6.2e-45 186.0 465 35.3
Sabra11G0025300 Salix brachista HOM05D005126 ORTHO05D006169 1.4e-44 184.9 528 31.8
Glyma.08G061700 Glycine max HOM05D005126 ORTHO05D006169 2.4e-44 184.1 464 36.0
PGR031G2928 Punica granatum HOM05D005126 ORTHO05D006169 3.1e-44 183.7 463 36.9
MD10G1310700 Malus domestica HOM05D005126 ORTHO05D006169 5.3e-44 183.0 477 34.8
arahy.Tifrunner.gnm1.ann1.JX13SW Arachis hypogaea HOM05D005126 ORTHO05D006169 2.0e-43 181.0 445 36.0
Gorai.010G253600 Gossypium raimondii HOM05D005126 ORTHO05D006169 2.0e-43 181.0 439 35.8
GSVIVG01006404001 Vitis vinifera HOM05D005126 ORTHO05D006169 2.0e-43 181.0 449 35.9
Aqoxy4G01910 Aquilegia oxysepala HOM05D005126 ORTHO05D006169 7.6e-43 179.1 417 37.2
Ca_18455_v3 Cicer arietinum L. HOM05D005126 ORTHO05D006169 4.9e-42 176.4 467 33.2
VMungo0251G0970 Vigna mungo HOM05D005126 ORTHO05D006169 4.9e-42 176.4 479 32.6
arahy.Tifrunner.gnm1.ann1.7M140W Arachis hypogaea HOM05D005126 ORTHO05D006169 8.4e-42 175.6 446 35.2
MELO3C007347.2 Cucumis melo HOM05D005126 ORTHO05D006169 3.2e-41 173.7 464 36.6
Sabra11G0019400 Salix brachista HOM05D005126 ORTHO05D006169 3.2e-41 173.7 528 30.9
TPR.G13921 Trifolium pratense HOM05D005126 ORTHO05D006169 3.2e-41 173.7 466 34.8
CsaV3_6G049470 Cucumis sativus L. HOM05D005126 ORTHO05D006169 7.1e-41 172.6 465 35.3
Sed0023382 Sechium edule HOM05D005126 ORTHO05D006169 2.7e-40 170.6 455 36.0
MBI07_g11719_MAGBIO Magnolia biondii HOM05D005126 ORTHO05D006169 1.3e-39 168.3 448 35.0
THA.LOC104809525 Tarenaya hassleriana HOM05D005126 ORTHO05D006169 3.9e-39 166.8 499 30.9
PSO832G1831 Papaver somniferum HOM05D005126 ORTHO05D006169 8.7e-39 165.6 432 36.3
FAN25G1045 Fragaria x ananassa HOM05D005126 ORTHO05D006169 1.1e-38 165.2 405 37.8
Eucgr.H00119 Eucalyptus grandis HOM05D005126 ORTHO05D006169 1.9e-38 164.5 505 33.1
Hma1.2p1_0809F.1_g221780 Hydrangea macrophylla HOM05D005126 ORTHO05D006169 2.5e-38 164.1 456 34.4
ClCG01G022310 Citrullus lanatus HOM05D005126 ORTHO05D006169 7.4e-38 162.5 499 34.1
PSO210G4646 Papaver somniferum HOM05D005126 ORTHO05D006169 1.6e-37 161.4 453 35.3
AL2G14430 Arabidopsis lyrata HOM05D005126 ORTHO05D006169 1.8e-36 157.9 472 32.2
CSS0041207 Camellia sinensis var. sinensis HOM05D005126 ORTHO05D006169 5.9e-35 152.9 303 38.9
Manes.15G164500 Manihot esculenta HOM05D005126 ORTHO05D006169 1.0e-34 152.1 492 30.7
Actinidia26962 Actinidia chinensis HOM05D005126 ORTHO05D006169 1.7e-34 151.4 267 40.4
GSVIVG01006464001 Vitis vinifera HOM05D005126 ORTHO05D006169 5.0e-34 149.8 288 37.8
CSS0033857 Camellia sinensis var. sinensis HOM05D005126 ORTHO05D006169 8.5e-34 149.1 265 39.2
Actinidia05547 Actinidia chinensis HOM05D005126 ORTHO05D006169 2.7e-32 144.1 275 40.0
Carub.0002s0337 Capsella rubella HOM05D005126 ORTHO05D006169 3.6e-32 143.7 453 32.0
Psat7g105840 Pisum sativum HOM05D005126 ORTHO05D006169 3.6e-32 143.7 464 30.2
AT1G61690 Arabidopsis thaliana HOM05D005126 ORTHO05D006169 4.6e-32 143.3 471 32.9
CARHR050640 Cardamine hirsuta HOM05D005126 ORTHO05D006169 7.9e-32 142.5 463 33.3
Thhalv10023224m.g Eutrema salsugineum HOM05D005126 ORTHO05D006169 3.9e-31 140.2 447 31.5
CAN.G424.91 Capsicum annuum HOM05D005126 ORTHO05D006169 2.5e-30 137.5 433 30.7
Gohir.D10G017600 Gossypium hirsutum HOM05D005126 ORTHO05D006169 5.7e-30 136.3 440 30.5
Sp2g02860 Schrenkiella parvula HOM05D005126 ORTHO05D006169 5.7e-30 136.3 489 30.1
Gohir.A06G208600 Gossypium hirsutum HOM05D005126 ORTHO05D006169 9.7e-30 135.6 224 42.9
DCAR_004173 Daucus carota HOM05D005126 ORTHO05D006169 2.2e-29 134.4 312 35.9
Lj2C276T6 Lonicera japonica HOM05D005126 ORTHO05D006169 3.7e-29 133.7 473 29.4
Gorai.011G019500 Gossypium raimondii HOM05D005126 ORTHO05D006169 1.1e-28 132.1 440 30.2
vmacro03741 Vaccinium macrocarpon HOM05D005126 ORTHO05D006169 1.1e-28 132.1 394 32.5
A01p30560 Brassica napus HOM05D005126 ORTHO05D006169 5.3e-28 129.8 492 29.9
BraA01t03188Z Brassica rapa HOM05D005126 ORTHO05D006169 5.3e-28 129.8 492 29.9
C01p38950 Brassica napus HOM05D005126 ORTHO05D006169 3.4e-27 127.1 459 29.8
BcaB04g20363 Brassica carinata HOM05D005126 ORTHO05D006169 5.9e-27 126.3 498 30.1
BolC1t03845H Brassica oleracea HOM05D005126 ORTHO05D006169 5.9e-27 126.3 459 29.8
Peaxi162Scf00931g00055 Petunia axillaris HOM05D005126 ORTHO05D006169 1.0e-26 125.6 404 30.9
AUR62006818 Chenopodium quinoa HOM05D005126 ORTHO05D006169 3.8e-26 123.6 265 35.1
Nitab4.5_0006456g0050 Nicotiana tabacum HOM05D005126 ORTHO05D006169 2.5e-25 120.9 410 29.8
Aa31LG2G9130 Aethionema arabicum HOM05D005126 ORTHO05D006169 4.2e-25 120.2 470 29.1
AUR62000477 Chenopodium quinoa HOM05D005126 ORTHO05D006169 4.2e-25 120.2 265 35.8
Nitab4.5_0000503g0050 Nicotiana tabacum HOM05D005126 ORTHO05D006169 5.5e-25 119.8 423 30.7
Oeu015946.3 Olea europaea HOM05D005126 ORTHO05D006169 5.5e-25 119.8 279 33.0
Oeu045309.1 Olea europaea HOM05D005126 ORTHO05D006169 5.5e-25 119.8 180 42.2
PGSC0003DMG400021720 Solanum tuberosum HOM05D005126 ORTHO05D006169 3.6e-24 117.1 409 30.6
Cc02_g11860 Coffea canephora HOM05D005126 ORTHO05D006169 6.1e-24 116.3 406 31.3
Hund23540 Selenicereus undatus HOM05D005126 ORTHO05D006169 6.1e-24 116.3 267 34.8
Os03g0669800 Oryza sativa ssp. japonica HOM05D005126 ORTHO05D006169 7.9e-24 115.9 511 29.4
Sopen02g024620 Solanum pennellii HOM05D005126 ORTHO05D006169 7.9e-24 115.9 409 30.6
Sc05g0008390 Simmondsia chinensis HOM05D005126 ORTHO05D006169 1.4e-23 115.2 502 28.3
SalBow4G2671 Salvia bowleyana HOM05D005126 ORTHO05D006169 6.7e-23 112.8 284 33.1
EL10Ac4g09560 Beta vulgaris HOM05D005126 ORTHO05D006169 1.5e-22 111.7 283 34.3
Rhsim13G0163000 Rhododendron simsii HOM05D005126 ORTHO05D006169 5.7e-22 109.8 262 36.3
MSTRG.4220 Avicennia marina HOM05D005126 ORTHO05D006169 1.3e-21 108.6 263 36.5
CDE01G0539 Ceratophyllum demersum HOM05D005126 ORTHO05D006169 1.1e-20 105.5 231 37.2
Ah.06g190720 Amaranthus hybridus HOM05D005126 ORTHO05D006169 1.8e-20 104.8 393 30.8
ECA236G2220 Erigeron canadensis HOM05D005126 ORTHO05D006169 1.8e-20 104.8 487 29.2
ATR0804G089 Amborella trichopoda HOM05D005126 ORTHO05D006169 3.1e-20 104.0 229 41.0
Migut.N00381 Erythranthe guttata HOM05D005126 ORTHO05D006169 6.5e-18 96.3 266 33.1
SGA_v2.0_scaffold216G42402 Striga asiatica HOM05D005126 ORTHO05D006169 6.5e-18 96.3 298 31.5
SEGI_24274 Sequoiadendron giganteum HOM05D005126 ORTHO05D006169 3.6e-16 90.5 281 31.3
Zm00001eb245580 Zea mays HOM05D005126 ORTHO05D006169 1.4e-15 88.6 269 33.8
Lsat_1_v5_gn_7_18540 Lactuca sativa HOM05D005126 ORTHO05D006169 2.3e-15 87.8 303 30.4
unitig_736.g22481 Utricularia gibba HOM05D005126 ORTHO05D006169 5.7e-14 83.2 321 28.7
AagrBONN_evm.TU.Sc2ySwM_368.2701 Anthoceros agrestis HOM05D005126 ORTHO05D006169 1.1e-12 79.0 277 29.6
SMO141G0003 Selaginella moellendorffii HOM05D005126 ORTHO05D006169 1.1e-12 79.0 483 24.0
BcaB04g20360 Brassica carinata HOM05D005126 ORTHO05D006169 5.3e-12 76.6 234 33.3
CSS0026607 Camellia sinensis var. sinensis HOM05D005126 ORTHO05D006169 9.1e-12 75.9 240 32.9
HanXRQChr05g0130831 Helianthus annuus HOM05D005126 ORTHO05D006169 2.0e-11 74.7 515 24.5
BcaB04g20358 Brassica carinata HOM05D005126 ORTHO05D006169 7.7e-11 72.8 223 30.9
Pp3c16_8350 Physcomitrium patens HOM05D005126 ORTHO05D006169 8.5e-10 69.3 451 23.1
CDE12G0347 Ceratophyllum demersum HOM05D005126 ORTHO05D006169 4.2e-09 67.0 213 30.0
TAR626G0500 Trochodendron aralioides HOM05D005126 ORTHO05D006169 3.4e-06 57.4 335 26.3
Mapoly0032s0118 Marchantia polymorpha HOM05D005126 ORTHO05D006169 5.7e-06 56.6 277 26.0


User provided reference genes

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