Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 5.3e-123 444.5 249 100.0
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 4.0e-86 322.0 253 67.6
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 2.7e-82 309.3 253 64.4
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 1.9e-80 303.1 252 63.1
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 8.4e-76 287.7 258 61.6
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 2.7e-74 282.7 234 63.7
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 7.6e-69 264.6 253 57.7
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 6.4e-68 261.5 251 59.4
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 8.4e-68 261.2 253 57.3
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 1.7e-65 253.4 217 61.8
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 1.7e-65 253.4 257 56.8
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 1.5e-64 250.4 264 55.3
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 3.3e-64 249.2 252 55.6
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 3.6e-63 245.7 261 54.0
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 4.8e-63 245.4 255 56.9
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 1.1e-62 244.2 251 55.4
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 1.4e-62 243.8 252 54.8
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 2.4e-62 243.0 228 57.9
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 9.0e-62 241.1 256 53.9
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 2.0e-61 240.0 257 54.9
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 2.0e-61 240.0 263 54.8
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 2.6e-61 239.6 257 55.3
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 2.6e-61 239.6 224 58.9
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 3.4e-61 239.2 218 59.2
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 4.5e-61 238.8 253 53.8
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 5.8e-61 238.4 252 52.8
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 9.9e-61 237.7 254 54.3
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 4.9e-60 235.3 159 73.0
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 8.4e-60 234.6 215 60.5
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 8.4e-60 234.6 262 54.6
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 3.2e-59 232.6 254 55.9
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 4.2e-59 232.3 163 71.8
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 9.3e-59 231.1 257 52.1
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 1.6e-58 230.3 259 54.4
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 3.5e-58 229.2 256 52.0
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 4.6e-58 228.8 256 53.1
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 4.6e-58 228.8 149 74.5
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 6.0e-58 228.4 256 53.9
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 6.0e-58 228.4 258 53.5
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 1.3e-57 227.3 257 52.5
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 2.3e-57 226.5 264 53.0
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 3.0e-57 226.1 211 59.7
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 3.0e-57 226.1 259 52.1
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 3.9e-57 225.7 160 71.9
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 3.9e-57 225.7 160 71.9
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 5.1e-57 225.3 252 51.6
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 6.7e-57 224.9 162 70.4
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 8.7e-57 224.6 160 71.9
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 8.7e-57 224.6 264 53.0
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 3.3e-56 222.6 160 71.2
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 3.3e-56 222.6 160 71.2
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 7.4e-56 221.5 160 70.6
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 1.3e-55 220.7 241 53.1
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 1.6e-55 220.3 255 52.2
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 4.8e-55 218.8 258 50.0
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 6.2e-55 218.4 230 53.5
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 8.1e-55 218.0 160 69.4
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 1.1e-54 217.6 160 67.5
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 1.1e-54 217.6 253 56.9
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 1.4e-54 217.2 247 50.6
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 1.8e-54 216.9 160 69.4
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 3.1e-54 216.1 160 67.5
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 3.1e-54 216.1 282 46.8
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 9.0e-54 214.5 259 51.0
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 3.4e-53 212.6 219 54.8
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 3.4e-53 212.6 267 57.3
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 1.3e-52 210.7 216 52.3
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 1.7e-52 210.3 286 45.8
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 2.2e-52 209.9 270 56.7
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 3.8e-52 209.1 169 65.7
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 3.2e-51 206.1 168 64.9
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 4.2e-51 205.7 143 71.3
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 4.2e-51 205.7 162 65.4
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 4.2e-51 205.7 137 70.8
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 9.3e-51 204.5 137 72.3
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 9.3e-51 204.5 347 40.1
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 2.1e-50 203.4 254 48.0
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 1.8e-49 200.3 252 48.0
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 1.9e-48 196.8 251 47.0
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 2.5e-48 196.4 160 60.6
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 4.3e-48 195.7 282 43.6
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 2.1e-47 193.4 126 73.0
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 6.2e-47 191.8 145 65.5
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 1.1e-46 191.0 165 61.8
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 9.0e-46 188.0 159 60.4
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 2.0e-45 186.8 131 64.9
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 1.4e-43 180.6 159 58.5
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 5.5e-43 178.7 143 58.0
Haze_09518 Corylus avellana HOM05D000461 ORTHO05D009042 1.6e-42 177.2 269 48.0
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 1.6e-42 177.2 160 56.9
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 1.3e-41 174.1 160 58.8
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 8.7e-41 171.4 252 47.2
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 8.7e-41 171.4 161 55.9
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 1.1e-40 171.0 170 55.9
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 1.5e-40 170.6 202 49.0
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 3.7e-39 166.0 114 69.3
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 1.1e-38 164.5 160 56.2
Hund28424 Selenicereus undatus HOM05D000461 ORTHO05D009042 6.5e-36 155.2 185 50.3
Hund28429 Selenicereus undatus HOM05D000461 ORTHO05D009042 6.5e-36 155.2 185 50.3
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 4.6e-34 149.1 172 47.1
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 3.0e-33 146.4 176 48.9
RcHm_v2.0_Chr5g0035211 Rosa chinensis HOM05D000461 ORTHO05D009042 9.7e-32 141.4 111 64.0
PGSC0003DMG400019287 Solanum tuberosum HOM05D000461 ORTHO05D009042 2.4e-30 136.7 90 68.9
Hma1.2p1_1003F.1_g246740 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 3.4e-29 132.9 88 70.5
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 6.5e-28 128.6 171 48.0
Pp3c5_7600 Physcomitrium patens HOM05D000461 ORTHO05D009042 4.7e-26 122.5 169 42.6
SMO347G0332 Selaginella moellendorffii HOM05D000461 ORTHO05D009042 6.1e-26 122.1 155 39.4
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 3.9e-25 119.4 154 43.5
Manes.15G162800 Manihot esculenta HOM05D000461 ORTHO05D009042 3.7e-23 112.8 89 67.4
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 3.4e-21 106.3 76 64.5
unitig_85.g27405 Utricularia gibba HOM05D000461 ORTHO05D009042 1.4e-14 84.3 147 38.1
MBI18_g11113_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D009042 6.5e-12 75.5 56 67.9
AagrBONN_evm.TU.Sc2ySwM_117.739 Anthoceros agrestis HOM05D000461 ORTHO05D009042 4.8e-07 59.3 77 41.6


User provided reference genes

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