Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G1560 Trochodendron aralioides HOM05D003996 ORTHO05D004665 0.0e+00 1345.5 669 100.0
Dinv39747 Davidia involucrata HOM05D003996 ORTHO05D004665 1.9e-228 796.2 679 63.2
Aqoxy1G02929 Aquilegia oxysepala HOM05D003996 ORTHO05D004665 2.2e-219 766.1 683 60.8
Nn1g07292 Nelumbo nucifera HOM05D003996 ORTHO05D004665 2.9e-216 755.7 686 61.2
MBI16_g26185_MAGBIO Magnolia biondii HOM05D003996 ORTHO05D004665 5.0e-216 755.0 722 59.0
GSVIVG01030501001 Vitis vinifera HOM05D003996 ORTHO05D004665 2.7e-214 749.2 698 58.9
Dinv08722 Davidia involucrata HOM05D003996 ORTHO05D004665 6.5e-208 728.0 601 65.7
Thecc.01G181600 Theobroma cacao HOM05D003996 ORTHO05D004665 6.5e-208 728.0 698 58.3
Nn1g03381 Nelumbo nucifera HOM05D003996 ORTHO05D004665 2.1e-206 723.0 728 56.6
Gorai.001G196200 Gossypium raimondii HOM05D003996 ORTHO05D004665 3.6e-206 722.2 693 58.4
PSO210G1396 Papaver somniferum HOM05D003996 ORTHO05D004665 4.7e-206 721.8 705 57.0
Ciclev10014490m.g Citrus clementina HOM05D003996 ORTHO05D004665 7.9e-206 721.1 694 59.5
Sabra14G0120200 Salix brachista HOM05D003996 ORTHO05D004665 6.7e-205 718.0 697 58.5
Rhsim04G0050600 Rhododendron simsii HOM05D003996 ORTHO05D004665 1.3e-203 713.8 643 60.5
Duzib211G0403 Durio zibethinus HOM05D003996 ORTHO05D004665 2.2e-203 713.0 694 58.6
Gohir.D07G175200 Gossypium hirsutum HOM05D003996 ORTHO05D004665 2.8e-203 712.6 698 57.7
PSO832G2142 Papaver somniferum HOM05D003996 ORTHO05D004665 8.2e-203 711.1 705 56.2
Gohir.A07G168800 Gossypium hirsutum HOM05D003996 ORTHO05D004665 1.6e-201 706.8 693 57.1
Hma1.2p1_2319F.1_g319820 Hydrangea macrophylla HOM05D003996 ORTHO05D004665 1.0e-200 704.1 667 57.7
Potri.014G158200 Populus trichocarpa HOM05D003996 ORTHO05D004665 5.0e-200 701.8 697 57.2
Atru.chr6.3252 Acer truncatum HOM05D003996 ORTHO05D004665 6.1e-198 694.9 693 56.6
TWI75G1163 Tripterygium wilfordii HOM05D003996 ORTHO05D004665 6.1e-198 694.9 690 57.1
QL08p030755 Quercus lobata HOM05D003996 ORTHO05D004665 8.0e-198 694.5 696 57.2
Duzib138G0037 Durio zibethinus HOM05D003996 ORTHO05D004665 5.2e-197 691.8 647 59.5
Hma1.2p1_0177F.1_g078040 Hydrangea macrophylla HOM05D003996 ORTHO05D004665 8.8e-197 691.0 648 58.6
TWI36G0149 Tripterygium wilfordii HOM05D003996 ORTHO05D004665 8.8e-197 691.0 684 56.7
CANSAT64G2545 Cannabis sativa HOM05D003996 ORTHO05D004665 4.4e-196 688.7 702 55.8
vmacro09358 Vaccinium macrocarpon HOM05D003996 ORTHO05D004665 5.7e-196 688.3 661 57.2
PSO541G1393 Papaver somniferum HOM05D003996 ORTHO05D004665 7.5e-196 688.0 699 56.5
Manes.12G069800 Manihot esculenta HOM05D003996 ORTHO05D004665 4.1e-194 682.2 690 56.2
PSO675G0796 Papaver somniferum HOM05D003996 ORTHO05D004665 2.0e-193 679.9 699 56.1
Potri.002G224900 Populus trichocarpa HOM05D003996 ORTHO05D004665 7.2e-191 671.4 687 55.9
Nitab4.5_0008863g0010 Nicotiana tabacum HOM05D003996 ORTHO05D004665 1.2e-190 670.6 673 56.6
Prupe.3G210900 Prunus persica HOM05D003996 ORTHO05D004665 3.4e-188 662.5 787 50.8
PGSC0003DMG400000690 Solanum tuberosum HOM05D003996 ORTHO05D004665 1.7e-187 660.2 670 55.4
Cc05_g02970 Coffea canephora HOM05D003996 ORTHO05D004665 1.1e-186 657.5 691 54.8
Sopen07g024690 Solanum pennellii HOM05D003996 ORTHO05D004665 3.1e-186 656.0 670 54.9
Oeu046908.1 Olea europaea HOM05D003996 ORTHO05D004665 5.4e-186 655.2 645 54.6
DCAR_012922 Daucus carota HOM05D003996 ORTHO05D004665 3.5e-185 652.5 685 53.3
Solyc07g049350.3 Solanum lycopersicum HOM05D003996 ORTHO05D004665 4.5e-185 652.1 670 54.6
TPR.G29036 Trifolium pratense HOM05D003996 ORTHO05D004665 4.5e-185 652.1 666 55.3
Lalb_Chr18g0049761 Lupinus albus HOM05D003996 ORTHO05D004665 7.7e-185 651.4 669 55.0
ClCG02G018060 Citrullus lanatus HOM05D003996 ORTHO05D004665 1.5e-183 647.1 682 53.7
Migut.H01245 Erythranthe guttata HOM05D003996 ORTHO05D004665 1.9e-183 646.7 705 52.5
Lj6g0017826 Lotus japonicus HOM05D003996 ORTHO05D004665 3.2e-183 646.0 665 55.3
MSTRG.14132 Avicennia marina HOM05D003996 ORTHO05D004665 5.5e-183 645.2 701 52.8
Peaxi162Scf00921g00252 Petunia axillaris HOM05D003996 ORTHO05D004665 2.8e-182 642.9 655 55.0
Sed0004670 Sechium edule HOM05D003996 ORTHO05D004665 2.8e-182 642.9 660 53.8
AUR62032475 Chenopodium quinoa HOM05D003996 ORTHO05D004665 4.7e-182 642.1 667 54.1
Lalb_Chr15g0080851 Lupinus albus HOM05D003996 ORTHO05D004665 4.7e-182 642.1 666 54.5
MD09G1113700 Malus domestica HOM05D003996 ORTHO05D004665 4.7e-182 642.1 754 52.1
Nitab4.5_0000482g0250 Nicotiana tabacum HOM05D003996 ORTHO05D004665 6.1e-182 641.7 664 55.4
Phvul.006G012800 Phaseolus vulgaris HOM05D003996 ORTHO05D004665 1.4e-181 640.6 699 52.5
Actinidia10801 Actinidia chinensis HOM05D003996 ORTHO05D004665 1.8e-181 640.2 619 57.5
HanXRQChr16g0506421 Helianthus annuus HOM05D003996 ORTHO05D004665 2.3e-181 639.8 686 52.3
Gohir.A07G082500 Gossypium hirsutum HOM05D003996 ORTHO05D004665 3.0e-181 639.4 710 53.4
Gorai.001G095400 Gossypium raimondii HOM05D003996 ORTHO05D004665 2.0e-180 636.7 710 53.0
CsaV3_6G015350 Cucumis sativus L. HOM05D003996 ORTHO05D004665 7.5e-180 634.8 683 52.4
Eucgr.K00757 Eucalyptus grandis HOM05D003996 ORTHO05D004665 1.7e-179 633.6 699 52.9
Gohir.D07G089000 Gossypium hirsutum HOM05D003996 ORTHO05D004665 1.7e-179 633.6 710 52.8
Glyma.20G056800 Glycine max HOM05D003996 ORTHO05D004665 8.3e-179 631.3 690 53.5
THA.LOC104801005 Tarenaya hassleriana HOM05D003996 ORTHO05D004665 8.3e-179 631.3 693 51.9
ECA236G3366 Erigeron canadensis HOM05D003996 ORTHO05D004665 2.4e-178 629.8 695 52.5
DCAR_021140 Daucus carota HOM05D003996 ORTHO05D004665 5.9e-177 625.2 681 53.6
RcHm_v2.0_Chr2g0158131 Rosa chinensis HOM05D003996 ORTHO05D004665 7.8e-177 624.8 729 51.0
PGR142G3363 Punica granatum HOM05D003996 ORTHO05D004665 1.1e-175 620.9 695 52.7
AL4G28490 Arabidopsis lyrata HOM05D003996 ORTHO05D004665 9.5e-175 617.8 703 50.1
Medtr3g080400 Medicago truncatula HOM05D003996 ORTHO05D004665 9.5e-175 617.8 692 51.4
VMungo0540G1114 Vigna mungo HOM05D003996 ORTHO05D004665 9.5e-175 617.8 641 54.6
MELO3C019738.2 Cucumis melo HOM05D003996 ORTHO05D004665 1.2e-174 617.5 655 53.3
CAN.G1493.1 Capsicum annuum HOM05D003996 ORTHO05D004665 3.6e-174 615.9 656 53.7
Lsat_1_v5_gn_7_95060 Lactuca sativa HOM05D003996 ORTHO05D004665 3.6e-174 615.9 658 51.8
Sp4g15330 Schrenkiella parvula HOM05D003996 ORTHO05D004665 8.0e-174 614.8 692 50.9
Thhalv10016338m.g Eutrema salsugineum HOM05D003996 ORTHO05D004665 3.0e-173 612.8 698 50.9
FAN14G1081 Fragaria x ananassa HOM05D003996 ORTHO05D004665 6.8e-173 611.7 730 50.8
THA.LOC104826134 Tarenaya hassleriana HOM05D003996 ORTHO05D004665 8.9e-173 611.3 700 50.6
Psat5g111680 Pisum sativum HOM05D003996 ORTHO05D004665 2.0e-172 610.1 654 54.0
AT2G32970 Arabidopsis thaliana HOM05D003996 ORTHO05D004665 9.8e-172 607.8 703 49.5
A03p18420 Brassica napus HOM05D003996 ORTHO05D004665 9.8e-172 607.8 699 50.2
FvH4_6g42290 Fragaria vesca HOM05D003996 ORTHO05D004665 1.7e-171 607.1 730 50.5
BolC3t14538H Brassica oleracea HOM05D003996 ORTHO05D004665 2.9e-171 606.3 698 49.9
Ca_16283_v3 Cicer arietinum L. HOM05D003996 ORTHO05D004665 2.9e-171 606.3 602 57.8
Haze_12770 Corylus avellana HOM05D003996 ORTHO05D004665 6.4e-171 605.1 543 61.9
CSS0033567 Camellia sinensis var. sinensis HOM05D003996 ORTHO05D004665 2.4e-170 603.2 586 56.7
Manes.13G066300 Manihot esculenta HOM05D003996 ORTHO05D004665 3.2e-170 602.8 608 56.4
C03p21510 Brassica napus HOM05D003996 ORTHO05D004665 7.0e-170 601.7 695 50.4
SGA_v2.0_scaffold159G37554 Striga asiatica HOM05D003996 ORTHO05D004665 7.0e-170 601.7 655 53.9
BcaC01g05877 Brassica carinata HOM05D003996 ORTHO05D004665 2.0e-169 600.1 695 50.2
FAN09G4790 Fragaria x ananassa HOM05D003996 ORTHO05D004665 2.7e-169 599.7 737 50.2
Hund15359 Selenicereus undatus HOM05D003996 ORTHO05D004665 2.7e-169 599.7 655 53.1
AUR62040130 Chenopodium quinoa HOM05D003996 ORTHO05D004665 5.9e-169 598.6 663 51.4
Sabra02G0172000 Salix brachista HOM05D003996 ORTHO05D004665 5.9e-169 598.6 692 52.2
Ah.03g136730 Amaranthus hybridus HOM05D003996 ORTHO05D004665 2.3e-168 596.7 644 52.8
FAN02G1294 Fragaria x ananassa HOM05D003996 ORTHO05D004665 2.3e-168 596.7 747 49.5
Carub.0004s1441 Capsella rubella HOM05D003996 ORTHO05D004665 8.6e-168 594.7 701 49.1
MD17G1103800 Malus domestica HOM05D003996 ORTHO05D004665 8.6e-168 594.7 737 49.8
CARHR126920 Cardamine hirsuta HOM05D003996 ORTHO05D004665 1.1e-167 594.3 709 48.9
Lj1C780G17 Lonicera japonica HOM05D003996 ORTHO05D004665 2.5e-167 593.2 584 56.7
FAN05G2256 Fragaria x ananassa HOM05D003996 ORTHO05D004665 4.3e-167 592.4 747 49.4
EL10Ac6g13970 Beta vulgaris HOM05D003996 ORTHO05D004665 1.2e-166 590.9 610 53.1
BcaB01g03955 Brassica carinata HOM05D003996 ORTHO05D004665 3.6e-166 589.3 699 48.8
arahy.Tifrunner.gnm1.ann1.LM4IV6 Arachis hypogaea HOM05D003996 ORTHO05D004665 2.0e-164 583.6 649 51.2
ECA240G4712 Erigeron canadensis HOM05D003996 ORTHO05D004665 1.3e-163 580.9 698 51.0
Aa31LG5G4630 Aethionema arabicum HOM05D003996 ORTHO05D004665 2.2e-163 580.1 698 48.4
HanXRQChr10g0310161 Helianthus annuus HOM05D003996 ORTHO05D004665 2.0e-161 573.5 663 51.7
Oeu010926.4 Olea europaea HOM05D003996 ORTHO05D004665 2.5e-159 566.6 612 54.6
Glyma.13G026700 Glycine max HOM05D003996 ORTHO05D004665 9.5e-159 564.7 468 64.3
ECA234G3864 Erigeron canadensis HOM05D003996 ORTHO05D004665 2.8e-158 563.1 668 49.4
Migut.M00422 Erythranthe guttata HOM05D003996 ORTHO05D004665 1.2e-156 557.8 641 50.7
Zm00001eb256350 Zea mays HOM05D003996 ORTHO05D004665 2.2e-155 553.5 685 47.7
SalBow7G2067 Salvia bowleyana HOM05D003996 ORTHO05D004665 6.4e-155 552.0 650 50.6
arahy.Tifrunner.gnm1.ann1.ZWYX82 Arachis hypogaea HOM05D003996 ORTHO05D004665 9.2e-154 548.1 608 52.6
Lsat_1_v5_gn_9_105800 Lactuca sativa HOM05D003996 ORTHO05D004665 4.6e-153 545.8 632 50.8
Lj8A129T88 Lonicera japonica HOM05D003996 ORTHO05D004665 4.3e-151 539.3 663 49.3
A05p12660 Brassica napus HOM05D003996 ORTHO05D004665 2.8e-150 536.6 688 46.5
Lsat_1_v5_gn_5_124380 Lactuca sativa HOM05D003996 ORTHO05D004665 8.1e-150 535.0 696 47.3
BraA05t20204Z Brassica rapa HOM05D003996 ORTHO05D004665 2.4e-149 533.5 694 46.1
SGA_v2.0_scaffold70G23382 Striga asiatica HOM05D003996 ORTHO05D004665 1.5e-148 530.8 651 47.8
BcaC02g11363 Brassica carinata HOM05D003996 ORTHO05D004665 3.2e-146 523.1 696 45.5
C04p16550 Brassica napus HOM05D003996 ORTHO05D004665 4.1e-146 522.7 696 45.5
HanXRQChr10g0306531 Helianthus annuus HOM05D003996 ORTHO05D004665 1.2e-145 521.2 655 47.5
HPP92_010852 Vanilla planifolia HOM05D003996 ORTHO05D004665 6.0e-145 518.8 716 46.9
Os02g0771800 Oryza sativa ssp. japonica HOM05D003996 ORTHO05D004665 1.5e-143 514.2 709 44.1
DCAR_023146 Daucus carota HOM05D003996 ORTHO05D004665 1.9e-143 513.8 705 45.1
Sed0016081 Sechium edule HOM05D003996 ORTHO05D004665 1.2e-142 511.1 622 49.7
BolC4t23207H Brassica oleracea HOM05D003996 ORTHO05D004665 9.0e-141 505.0 703 44.5
BraA03t11105Z Brassica rapa HOM05D003996 ORTHO05D004665 4.4e-140 502.7 677 45.2
SHI10040 Sapria himalayana HOM05D003996 ORTHO05D000023 9.9e-140 501.5 682 46.3
CDE07G0144 Ceratophyllum demersum HOM05D003996 ORTHO05D004665 2.6e-132 476.9 739 42.2
CiPaw.04G110600 Carya illinoinensis HOM05D003996 ORTHO05D004665 9.6e-127 458.4 519 52.2
BcaNung06410 Brassica carinata HOM05D003996 ORTHO05D004665 4.0e-125 453.0 647 44.5
Sc06g0009640 Simmondsia chinensis HOM05D003996 ORTHO05D004665 3.9e-120 436.4 527 48.8
CANSAT01G0074 Cannabis sativa HOM05D003996 ORTHO05D004665 2.2e-102 377.5 649 38.5
Sc05g0002040 Simmondsia chinensis HOM05D003996 ORTHO05D004665 2.8e-102 377.1 647 38.5
unitig_26.g9924 Utricularia gibba HOM05D003996 ORTHO05D004665 3.7e-102 376.7 514 45.7
SEGI_14118 Sequoiadendron giganteum HOM05D003996 ORTHO05D004665 2.4e-101 374.0 749 37.1
COL.COLO4_21871 Corchorus olitorius HOM05D003996 ORTHO05D004665 3.1e-101 373.6 420 53.1
AUR62001107 Chenopodium quinoa HOM05D003996 ORTHO05D004665 7.9e-97 359.0 657 38.1
AUR62008931 Chenopodium quinoa HOM05D003996 ORTHO05D004665 7.9e-97 359.0 676 37.3
BcaB02g10511 Brassica carinata HOM05D003996 ORTHO05D004665 1.1e-95 355.1 502 44.6
Duzib133G0500 Durio zibethinus HOM05D003996 ORTHO05D004665 9.1e-93 345.5 657 35.9
EL10Ac7g17863 Beta vulgaris HOM05D003996 ORTHO05D004665 2.6e-92 344.0 653 37.2
Hund18404 Selenicereus undatus HOM05D003996 ORTHO05D004665 7.7e-92 342.4 647 37.6
CANSAT01G3237 Cannabis sativa HOM05D003996 ORTHO05D004665 4.2e-90 336.7 464 43.1
GSVIVG01003286001 Vitis vinifera HOM05D003996 ORTHO05D004665 3.1e-85 320.5 638 35.3
Pp3c9_1750 Physcomitrium patens HOM05D003996 ORTHO05D004665 1.2e-84 318.5 806 32.9
Pp3c17_9940 Physcomitrium patens HOM05D003996 ORTHO05D004665 1.0e-83 315.5 778 33.2
SMO361G0133 Selaginella moellendorffii HOM05D003996 ORTHO05D004665 1.1e-82 312.0 653 36.8
Zm00001eb297890 Zea mays HOM05D003996 ORTHO05D004665 2.1e-81 307.8 610 36.4
CiPaw.03G155400 Carya illinoinensis HOM05D003996 ORTHO05D004665 3.0e-80 303.9 417 47.5
Cpa.g.sc132.19 Carica papaya HOM05D003996 ORTHO05D004665 1.2e-79 302.0 298 56.4
COL.COLO4_21870 Corchorus olitorius HOM05D003996 ORTHO05D004665 1.3e-78 298.5 214 69.6
CiPaw.03G155500 Carya illinoinensis HOM05D003996 ORTHO05D004665 1.0e-75 288.9 218 67.4
Mapoly0071s0059 Marchantia polymorpha HOM05D003996 ORTHO05D004665 6.5e-75 286.2 820 31.8
Ah.08g214450 Amaranthus hybridus HOM05D003996 ORTHO05D004665 4.7e-73 280.0 462 38.7
Manes.13G046600 Manihot esculenta HOM05D003996 ORTHO05D004665 5.4e-69 266.5 531 37.1
AagrBONN_evm.TU.Sc2ySwM_368.1061 Anthoceros agrestis HOM05D003996 ORTHO05D004665 1.6e-68 265.0 582 35.1
HPP92_011782 Vanilla planifolia HOM05D003996 ORTHO05D004665 4.7e-65 253.4 347 45.5
Hund05567 Selenicereus undatus HOM05D003996 ORTHO05D004665 5.0e-59 233.4 519 33.3
CBR_g29855 Chara braunii HOM05D003996 ORTHO05D004665 6.2e-41 173.3 359 35.9
Actinidia03595 Actinidia chinensis HOM05D003996 ORTHO05D004665 1.2e-36 159.1 108 74.1
Actinidia03596 Actinidia chinensis HOM05D003996 ORTHO05D004665 7.8e-36 156.4 278 36.3
Thecc.01G223400 Theobroma cacao HOM05D003996 ORTHO05D004665 1.4e-29 135.6 188 41.0
Hund15378 Selenicereus undatus HOM05D003996 ORTHO05D004665 3.2e-21 107.8 109 55.0
CiPaw.04G110700 Carya illinoinensis HOM05D003996 ORTHO05D004665 9.6e-18 96.3 66 72.7
C09p40870 Brassica napus HOM05D003996 ORTHO05D004665 2.0e-15 88.6 70 62.9
Cre12.g513852 Chlamydomonas reinhardtii HOM05D003996 ORTHO05D004665 1.1e-13 82.8 137 40.9
MCO15G069 Micromonas commoda HOM05D003996 ORTHO05D004665 5.4e-13 80.5 141 38.3
unitig_26.g9925 Utricularia gibba HOM05D003996 ORTHO05D004665 5.6e-10 70.5 52 67.3
Os05g0597400 Oryza sativa ssp. japonica HOM05D003996 ORTHO05D004665 2.8e-09 68.2 53 58.5
Actinidia03594 Actinidia chinensis HOM05D003996 ORTHO05D004665 1.1e-08 66.2 77 50.6
BcaC09g50171 Brassica carinata HOM05D003996 ORTHO05D092235 6.9e-08 63.5 49 61.2


User provided reference genes

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