Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G1535 Trochodendron aralioides HOM05D000187 ORTHO05D000230 6.0e-64 247.3 119 100.0
Nn1g04281 Nelumbo nucifera HOM05D000187 ORTHO05D000230 5.5e-25 117.9 100 61.0
TAR627G0605 Trochodendron aralioides HOM05D000187 ORTHO05D000230 4.6e-24 114.8 103 60.2
Dinv14954 Davidia involucrata HOM05D000187 ORTHO05D000230 1.2e-19 100.1 100 51.0
TAR374G1673 Trochodendron aralioides HOM05D000187 ORTHO05D000230 2.6e-19 99.0 102 54.9
TAR374G1745 Trochodendron aralioides HOM05D000187 ORTHO05D000230 2.6e-19 99.0 102 54.9
MBI06_g34196_MAGBIO Magnolia biondii HOM05D000187 ORTHO05D000230 4.5e-19 98.2 97 49.5
PSO832G1249 Papaver somniferum HOM05D000187 ORTHO05D000230 5.9e-19 97.8 100 46.0
CSS0038930 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000230 1.0e-18 97.1 101 46.5
TAR629G2067 Trochodendron aralioides HOM05D000187 ORTHO05D000230 1.7e-18 96.3 104 54.8
Dinv20220 Davidia involucrata HOM05D000187 ORTHO05D000230 2.9e-18 95.5 100 47.0
TAR374G0500 Trochodendron aralioides HOM05D000187 ORTHO05D000230 3.8e-18 95.1 102 54.9
Nn1g06360 Nelumbo nucifera HOM05D000187 ORTHO05D000230 1.9e-17 92.8 100 47.0
MBI07_g06443_MAGBIO Magnolia biondii HOM05D000187 ORTHO05D000230 7.2e-17 90.9 98 50.0
Manes.03G104000 Manihot esculenta HOM05D000187 ORTHO05D000230 3.6e-16 88.6 104 50.0
PSO210G6478 Papaver somniferum HOM05D000187 ORTHO05D000230 4.6e-16 88.2 100 42.0
Actinidia35231 Actinidia chinensis HOM05D000187 ORTHO05D000230 1.0e-15 87.0 91 50.5
vmacro09511 Vaccinium macrocarpon HOM05D000187 ORTHO05D000230 1.8e-15 86.3 102 44.1
Manes.15G090400 Manihot esculenta HOM05D000187 ORTHO05D000230 2.3e-15 85.9 104 49.0
Cpa.g.sc841.2 Carica papaya HOM05D000187 ORTHO05D000230 3.9e-15 85.1 98 42.9
Potri.011G097100 Populus trichocarpa HOM05D000187 ORTHO05D000230 3.9e-15 85.1 104 44.2
Aqoxy4G00555 Aquilegia oxysepala HOM05D000187 ORTHO05D000230 8.8e-15 84.0 106 43.4
Rhsim04G0023500 Rhododendron simsii HOM05D000187 ORTHO05D000230 4.3e-14 81.6 101 40.6
Sabra11G0091800 Salix brachista HOM05D000187 ORTHO05D000230 5.7e-14 81.3 106 43.4
Thecc.07G100600 Theobroma cacao HOM05D000187 ORTHO05D000230 5.7e-14 81.3 105 40.0
Potri.001G373700 Populus trichocarpa HOM05D000187 ORTHO05D000230 7.4e-14 80.9 106 44.3
Sabra11G0090200 Salix brachista HOM05D000187 ORTHO05D000230 7.4e-14 80.9 106 43.4
Gohir.A13G147800 Gossypium hirsutum HOM05D000187 ORTHO05D000230 1.7e-13 79.7 102 41.2
Haze_09375 Corylus avellana HOM05D000187 ORTHO05D000230 4.8e-13 78.2 101 42.6
TWI39G1123 Tripterygium wilfordii HOM05D000187 ORTHO05D000230 8.2e-13 77.4 101 42.6
Duzib213G0202 Durio zibethinus HOM05D000187 ORTHO05D000230 1.4e-12 76.6 103 40.8
Sabra16G0246100 Salix brachista HOM05D000187 ORTHO05D000230 2.4e-12 75.9 106 42.5
Ciclev10007976m.g Citrus clementina HOM05D000187 ORTHO05D000230 5.3e-12 74.7 102 39.2
Atru.chr2.2348 Acer truncatum HOM05D000187 ORTHO05D000230 6.9e-12 74.3 103 39.8
CiPaw.12G116200 Carya illinoinensis HOM05D000187 ORTHO05D000230 6.9e-12 74.3 100 41.0
Gorai.013G172300 Gossypium raimondii HOM05D000187 ORTHO05D000230 9.1e-12 73.9 102 40.2
Gohir.D11G306400 Gossypium hirsutum HOM05D000187 ORTHO05D000230 1.2e-11 73.6 104 42.3
Gorai.007G325600 Gossypium raimondii HOM05D000187 ORTHO05D000230 1.2e-11 73.6 104 42.3
Duzib268G0814 Durio zibethinus HOM05D000187 ORTHO05D000230 2.0e-11 72.8 102 41.2
Gohir.D13G152400 Gossypium hirsutum HOM05D000187 ORTHO05D000230 3.4e-11 72.0 102 39.2
Gohir.A11G286700 Gossypium hirsutum HOM05D000187 ORTHO05D000230 4.5e-11 71.6 105 42.9
CSS0029997 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000230 1.0e-10 70.5 84 41.7
TWI38G1205 Tripterygium wilfordii HOM05D000187 ORTHO05D000230 1.3e-10 70.1 101 40.6
Nitab4.5_0000831g0010 Nicotiana tabacum HOM05D000187 ORTHO05D000230 1.7e-10 69.7 118 31.4
RcHm_v2.0_Chr5g0031881 Rosa chinensis HOM05D000187 ORTHO05D000230 2.2e-10 69.3 101 41.6
GSVIVG01014254001 Vitis vinifera HOM05D000187 ORTHO05D000230 2.9e-10 68.9 99 37.4
Prupe.4G172400 Prunus persica HOM05D000187 ORTHO05D000230 3.8e-10 68.6 101 38.6
Gorai.002G065600 Gossypium raimondii HOM05D000187 ORTHO05D000230 8.5e-10 67.4 90 41.1
Duzib170G0195 Durio zibethinus HOM05D000187 ORTHO05D000230 1.1e-09 67.0 102 36.3
Gohir.D01G046200 Gossypium hirsutum HOM05D000187 ORTHO05D000230 1.4e-09 66.6 90 41.1
Nitab4.5_0000246g0090 Nicotiana tabacum HOM05D000187 ORTHO05D000230 1.4e-09 66.6 100 31.0
QL08p023141 Quercus lobata HOM05D000187 ORTHO05D000230 5.5e-09 64.7 85 45.9
Gohir.A01G059800 Gossypium hirsutum HOM05D000187 ORTHO05D000230 7.2e-09 64.3 91 39.6
MD11G1257600 Malus domestica HOM05D000187 ORTHO05D000230 7.2e-09 64.3 101 36.6
Hma1.2p1_0416F.1_g148540 Hydrangea macrophylla HOM05D000187 ORTHO05D000230 9.4e-09 63.9 100 35.0
Nitab4.5_0005522g0030 Nicotiana tabacum HOM05D000187 ORTHO05D000230 2.1e-08 62.8 92 35.9
Hund22763 Selenicereus undatus HOM05D000187 ORTHO05D000230 2.1e-08 62.8 99 39.4
MD03G1237000 Malus domestica HOM05D000187 ORTHO05D000230 4.7e-08 61.6 100 35.0
Oeu060566.1 Olea europaea HOM05D000187 ORTHO05D000230 7.9e-08 60.8 91 39.6
Nitab4.5_0000332g0230 Nicotiana tabacum HOM05D000187 ORTHO05D000230 1.4e-07 60.1 92 33.7
MSTRG.14943 Avicennia marina HOM05D000187 ORTHO05D000230 2.3e-07 59.3 90 37.8
FvH4_3g19090 Fragaria vesca HOM05D000187 ORTHO05D000230 3.0e-07 58.9 105 38.1
FAN11G2980 Fragaria x ananassa HOM05D000187 ORTHO05D000230 3.0e-07 58.9 105 38.1
FAN25G2906 Fragaria x ananassa HOM05D000187 ORTHO05D000230 3.0e-07 58.9 105 38.1
Sc16g0007360 Simmondsia chinensis HOM05D000187 ORTHO05D000230 3.0e-07 58.9 102 36.3
THA.LOC104815565 Tarenaya hassleriana HOM05D000187 ORTHO05D000230 3.0e-07 58.9 94 36.2
FAN21G2982 Fragaria x ananassa HOM05D000187 ORTHO05D000230 6.7e-07 57.8 105 38.1
ClCG07G009880 Citrullus lanatus HOM05D000187 ORTHO05D000230 8.8e-07 57.4 120 29.2
FAN16G0483 Fragaria x ananassa HOM05D000187 ORTHO05D000230 2.0e-06 56.2 105 37.1
Nitab4.5_0009380g0030 Nicotiana tabacum HOM05D000187 ORTHO05D000230 2.6e-06 55.8 78 30.8
Phvul.005G068800 Phaseolus vulgaris HOM05D000187 ORTHO05D000230 4.4e-06 55.1 94 38.3
TPR.G29641 Trifolium pratense HOM05D000187 ORTHO05D000230 4.4e-06 55.1 93 38.7
Peaxi162Scf00027g01110 Petunia axillaris HOM05D000187 ORTHO05D000230 7.4e-06 54.3 99 31.3


User provided reference genes

Program Settings