Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G1430 Trochodendron aralioides HOM05D006014 ORTHO05D007608 2.6e-90 335.5 182 100.0
Nn1g04203 Nelumbo nucifera HOM05D006014 ORTHO05D007608 4.1e-72 275.0 185 82.2
Manes.15G089600 Manihot esculenta HOM05D006014 ORTHO05D007608 4.7e-60 235.0 182 74.2
TAR624G0768 Trochodendron aralioides HOM05D006014 ORTHO05D007608 8.0e-60 234.2 169 81.1
FvH4_3g19430 Fragaria vesca HOM05D006014 ORTHO05D007608 5.2e-59 231.5 185 74.1
FAN11G2300 Fragaria x ananassa HOM05D006014 ORTHO05D007608 5.2e-59 231.5 185 74.1
FAN21G0470 Fragaria x ananassa HOM05D006014 ORTHO05D007608 6.8e-59 231.1 185 73.5
Hma1.2p1_1411F.1_g281760 Hydrangea macrophylla HOM05D006014 ORTHO05D007608 2.6e-58 229.2 181 74.0
Ciclev10009636m.g Citrus clementina HOM05D006014 ORTHO05D007608 3.4e-58 228.8 178 73.6
QL08p024005 Quercus lobata HOM05D006014 ORTHO05D007608 4.4e-58 228.4 172 77.9
FAN25G0078 Fragaria x ananassa HOM05D006014 ORTHO05D007608 1.7e-57 226.5 185 72.4
GSVIVG01014290001 Vitis vinifera HOM05D006014 ORTHO05D007608 2.2e-57 226.1 177 73.4
Thecc.07G096300 Theobroma cacao HOM05D006014 ORTHO05D007608 2.9e-57 225.7 191 70.7
CiPaw.11G167800 Carya illinoinensis HOM05D006014 ORTHO05D007608 1.4e-56 223.4 146 85.6
RcHm_v2.0_Chr5g0032711 Rosa chinensis HOM05D006014 ORTHO05D007608 3.2e-56 222.2 183 73.8
ClCG11G017820 Citrullus lanatus HOM05D006014 ORTHO05D007608 1.6e-55 219.9 176 72.2
Duzib170G0605 Durio zibethinus HOM05D006014 ORTHO05D007608 2.0e-55 219.5 193 67.9
Prupe.4G176000 Prunus persica HOM05D006014 ORTHO05D007608 3.5e-55 218.8 181 71.3
COL.COLO4_03477 Corchorus olitorius HOM05D006014 ORTHO05D007608 4.6e-55 218.4 191 68.1
Dinv14938 Davidia involucrata HOM05D006014 ORTHO05D007608 4.6e-55 218.4 182 71.4
CSS0037767 Camellia sinensis var. sinensis HOM05D006014 ORTHO05D007608 5.9e-55 218.0 187 71.1
Nitab4.5_0003033g0060 Nicotiana tabacum HOM05D006014 ORTHO05D007608 5.9e-55 218.0 181 70.2
MD11G1253300 Malus domestica HOM05D006014 ORTHO05D007608 3.9e-54 215.3 184 69.0
PGR083G0398 Punica granatum HOM05D006014 ORTHO05D007608 3.9e-54 215.3 174 73.6
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 8.6e-54 214.2 180 71.7
Peaxi162Scf00069g01737 Petunia axillaris HOM05D006014 ORTHO05D007608 1.1e-53 213.8 177 69.5
Potri.001G396600 Populus trichocarpa HOM05D006014 ORTHO05D007608 1.1e-53 213.8 180 68.9
Glyma.12G162300 Glycine max HOM05D006014 ORTHO05D007608 3.3e-53 212.2 180 72.2
Gohir.D05G347800 Gossypium hirsutum HOM05D006014 ORTHO05D007608 5.6e-53 211.5 177 70.6
Gorai.009G375600 Gossypium raimondii HOM05D006014 ORTHO05D007608 5.6e-53 211.5 177 70.6
MD03G1232600 Malus domestica HOM05D006014 ORTHO05D007608 6.2e-52 208.0 184 67.9
Sabra16G0259700 Salix brachista HOM05D006014 ORTHO05D007608 6.2e-52 208.0 175 68.0
MELO3C025609.2 Cucumis melo HOM05D006014 ORTHO05D007608 8.0e-52 207.6 176 71.6
Migut.H01957 Erythranthe guttata HOM05D006014 ORTHO05D007608 8.0e-52 207.6 180 66.1
Sed0004006 Sechium edule HOM05D006014 ORTHO05D007608 8.0e-52 207.6 172 70.3
Gohir.A04G035600 Gossypium hirsutum HOM05D006014 ORTHO05D007608 1.0e-51 207.2 177 69.5
CARHR090180 Cardamine hirsuta HOM05D006014 ORTHO05D007608 1.8e-51 206.5 184 65.8
Cc05_g11740 Coffea canephora HOM05D006014 ORTHO05D007608 1.8e-51 206.5 180 67.2
Nitab4.5_0013317g0010 Nicotiana tabacum HOM05D006014 ORTHO05D007608 1.8e-51 206.5 182 65.4
TWI38G2086 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 1.8e-51 206.5 178 68.0
Aqoxy1G02326 Aquilegia oxysepala HOM05D006014 ORTHO05D007608 2.3e-51 206.1 182 67.0
Oeu051088.1 Olea europaea HOM05D006014 ORTHO05D007608 4.0e-51 205.3 185 67.6
CsaV3_4G033460 Cucumis sativus L. HOM05D006014 ORTHO05D007608 8.9e-51 204.1 176 71.0
TPR.G28172 Trifolium pratense HOM05D006014 ORTHO05D007608 8.9e-51 204.1 182 68.7
CANSAT35G1465 Cannabis sativa HOM05D006014 ORTHO05D007608 1.2e-50 203.8 177 66.7
Solyc07g062870.3 Solanum lycopersicum HOM05D006014 ORTHO05D007608 1.2e-50 203.8 175 66.9
Sopen07g031070 Solanum pennellii HOM05D006014 ORTHO05D007608 1.2e-50 203.8 175 66.9
CDE10G0058 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 3.4e-50 202.2 173 68.8
Glyma.06G236200 Glycine max HOM05D006014 ORTHO05D007608 3.4e-50 202.2 181 70.2
Sp3g13400 Schrenkiella parvula HOM05D006014 ORTHO05D007608 3.4e-50 202.2 188 63.8
BolC1t04895H Brassica oleracea HOM05D006014 ORTHO05D007608 4.4e-50 201.8 192 64.6
THA.LOC104815561 Tarenaya hassleriana HOM05D006014 ORTHO05D007608 4.4e-50 201.8 180 67.8
CDE10G1292 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 7.5e-50 201.1 175 66.9
Eucgr.F01167 Eucalyptus grandis HOM05D006014 ORTHO05D007608 1.3e-49 200.3 177 68.9
Lj3g0022855 Lotus japonicus HOM05D006014 ORTHO05D007608 1.3e-49 200.3 175 69.7
DCAR_019570 Daucus carota HOM05D006014 ORTHO05D007608 1.7e-49 199.9 182 65.4
PGSC0003DMG400012405 Solanum tuberosum HOM05D006014 ORTHO05D007608 1.7e-49 199.9 173 65.9
A01p38830 Brassica napus HOM05D006014 ORTHO05D007608 2.2e-49 199.5 192 63.0
BraA01t03929Z Brassica rapa HOM05D006014 ORTHO05D007608 2.2e-49 199.5 192 63.0
MSTRG.12894 Avicennia marina HOM05D006014 ORTHO05D007608 2.9e-49 199.1 180 67.8
C01p49380 Brassica napus HOM05D006014 ORTHO05D007608 3.7e-49 198.7 184 64.7
A03p39200 Brassica napus HOM05D006014 ORTHO05D007608 6.4e-49 198.0 188 65.4
Lalb_Chr07g0182891 Lupinus albus HOM05D006014 ORTHO05D007608 6.4e-49 198.0 182 65.4
AL3G27580 Arabidopsis lyrata HOM05D006014 ORTHO05D007608 8.3e-49 197.6 182 65.9
Phvul.011G162800 Phaseolus vulgaris HOM05D006014 ORTHO05D007608 1.1e-48 197.2 175 68.0
VMungo1127G0848 Vigna mungo HOM05D006014 ORTHO05D007608 1.1e-48 197.2 174 68.4
Oeu037371.1 Olea europaea HOM05D006014 ORTHO05D007608 1.4e-48 196.8 164 70.1
A05p34280 Brassica napus HOM05D006014 ORTHO05D007608 1.9e-48 196.4 194 61.9
BraA05t22249Z Brassica rapa HOM05D006014 ORTHO05D007608 1.9e-48 196.4 194 61.9
BcaB04g20944 Brassica carinata HOM05D006014 ORTHO05D007608 2.4e-48 196.1 177 64.4
arahy.Tifrunner.gnm1.ann1.FY4UJ9 Arachis hypogaea HOM05D006014 ORTHO05D007608 4.1e-48 195.3 225 57.8
Psat4g136440 Pisum sativum HOM05D006014 ORTHO05D007608 5.4e-48 194.9 177 66.7
BraA03t13069Z Brassica rapa HOM05D006014 ORTHO05D007608 7.0e-48 194.5 185 65.4
Lsat_1_v5_gn_5_128220 Lactuca sativa HOM05D006014 ORTHO05D007608 7.0e-48 194.5 177 66.7
PSO675G1148 Papaver somniferum HOM05D006014 ORTHO05D007608 9.2e-48 194.1 180 63.9
AT3G15190 Arabidopsis thaliana HOM05D006014 ORTHO05D007608 1.2e-47 193.7 184 64.1
BcaB06g29543 Brassica carinata HOM05D006014 ORTHO05D007608 1.2e-47 193.7 188 62.8
C05p52040 Brassica napus HOM05D006014 ORTHO05D007608 2.0e-47 193.0 188 62.2
PSO541G1420 Papaver somniferum HOM05D006014 ORTHO05D007608 3.5e-47 192.2 181 62.4
Sc03g0010200 Simmondsia chinensis HOM05D006014 ORTHO05D007608 7.8e-47 191.0 172 70.3
Ca_23028_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 2.3e-46 189.5 175 67.4
Ca_23030_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 2.3e-46 189.5 175 67.4
Carub.0003s1484 Capsella rubella HOM05D006014 ORTHO05D007608 3.0e-46 189.1 184 63.0
Aa31LG8G2390 Aethionema arabicum HOM05D006014 ORTHO05D007608 6.6e-46 188.0 194 58.2
Thhalv10021521m.g Eutrema salsugineum HOM05D006014 ORTHO05D007608 6.6e-46 188.0 191 59.7
Cfa020606 Carpinus fangiana HOM05D006014 ORTHO05D007608 8.6e-46 187.6 122 84.4
Medtr8g061350 Medicago truncatula HOM05D006014 ORTHO05D007608 1.5e-45 186.8 181 65.2
AUR62036161 Chenopodium quinoa HOM05D006014 ORTHO05D007608 1.9e-45 186.4 180 63.9
Nitab4.5_0000332g0180 Nicotiana tabacum HOM05D006014 ORTHO05D007608 5.6e-45 184.9 181 63.5
Hund04492 Selenicereus undatus HOM05D006014 ORTHO05D007608 1.2e-44 183.7 181 62.4
AUR62019472 Chenopodium quinoa HOM05D006014 ORTHO05D007608 1.6e-44 183.3 180 63.3
EL10Ac4g08237 Beta vulgaris HOM05D006014 ORTHO05D007608 2.8e-44 182.6 180 62.8
Nitab4.5_0002330g0100 Nicotiana tabacum HOM05D006014 ORTHO05D007608 2.8e-44 182.6 196 60.2
C03p47570 Brassica napus HOM05D006014 ORTHO05D007608 4.7e-44 181.8 133 75.2
MBI07_g30170_MAGBIO Magnolia biondii HOM05D006014 ORTHO05D007608 6.2e-44 181.4 183 61.2
SalBow8G3070 Salvia bowleyana HOM05D006014 ORTHO05D007608 6.2e-44 181.4 179 62.0
BcaC01g03887 Brassica carinata HOM05D006014 ORTHO05D007608 8.1e-44 181.0 125 78.4
Ah.06g184580 Amaranthus hybridus HOM05D006014 ORTHO05D007608 1.1e-43 180.6 180 63.3
BolC3t17032H Brassica oleracea HOM05D006014 ORTHO05D007608 1.8e-43 179.9 125 77.6
ECA234G0345 Erigeron canadensis HOM05D006014 ORTHO05D007608 1.8e-43 179.9 177 62.1
HanXRQChr10g0302621 Helianthus annuus HOM05D006014 ORTHO05D007608 3.1e-43 179.1 181 61.9
Actinidia35240 Actinidia chinensis HOM05D006014 ORTHO05D007608 3.4e-42 175.6 117 82.9
ATR0737G141 Amborella trichopoda HOM05D006014 ORTHO05D007608 3.4e-42 175.6 116 81.0
Rhsim04G0022600 Rhododendron simsii HOM05D006014 ORTHO05D007608 3.4e-42 175.6 173 60.7
arahy.Tifrunner.gnm1.ann1.QT5AN8 Arachis hypogaea HOM05D006014 ORTHO05D007608 8.3e-41 171.0 270 47.0
TWI39G1175 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 1.4e-40 170.2 127 72.4
Sed0026173 Sechium edule HOM05D006014 ORTHO05D007608 3.2e-40 169.1 173 60.1
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 1.9e-37 159.8 177 58.2
SEGI_01083 Sequoiadendron giganteum HOM05D006014 ORTHO05D007608 7.3e-37 157.9 172 57.0
Lj8A154T77 Lonicera japonica HOM05D006014 ORTHO05D007608 2.7e-31 139.4 176 51.1
Lj3g0017472 Lotus japonicus HOM05D006014 ORTHO05D007608 3.5e-31 139.0 112 70.5
Mapoly0009s0159 Marchantia polymorpha HOM05D006014 ORTHO05D007608 7.8e-31 137.9 156 57.1
Pp3c24_17080 Physcomitrium patens HOM05D006014 ORTHO05D007608 1.1e-29 134.0 128 60.2
Zm00001eb360330 Zea mays HOM05D006014 ORTHO05D007608 1.1e-27 127.5 108 64.8
Os01g0678600 Oryza sativa ssp. japonica HOM05D006014 ORTHO05D007608 1.8e-27 126.7 125 59.2
Pp3c20_13390 Physcomitrium patens HOM05D006014 ORTHO05D007608 2.4e-27 126.3 134 57.5
BcaC09g48477 Brassica carinata HOM05D006014 ORTHO05D007608 4.0e-27 125.6 142 58.5
SGA_v2.0_scaffold70G23686 Striga asiatica HOM05D006014 ORTHO05D007608 6.4e-25 118.2 346 34.1
AagrBONN_evm.TU.Sc2ySwM_344.3794 Anthoceros agrestis HOM05D006014 ORTHO05D007608 2.4e-24 116.3 163 49.7
CBR_g30802 Chara braunii HOM05D006014 ORTHO05D007608 2.1e-23 113.2 125 52.0
vmacro09523 Vaccinium macrocarpon HOM05D006014 ORTHO05D007608 6.0e-23 111.7 73 74.0
Dinv20203 Davidia involucrata HOM05D006014 ORTHO05D007608 1.1e-21 107.5 106 64.2
Cpa.g.sc131.85 Carica papaya HOM05D006014 ORTHO05D007608 9.0e-19 97.8 103 59.2
Gohir.A13G146850 Gossypium hirsutum HOM05D006014 ORTHO05D007608 1.7e-17 93.6 71 71.8
CBR_g39307 Chara braunii HOM05D006014 ORTHO05D007608 2.4e-16 89.7 81 59.3
Cre12.g494750 Chlamydomonas reinhardtii HOM05D006014 ORTHO05D007608 2.5e-13 79.7 107 47.7
HPP92_010061 Vanilla planifolia HOM05D006014 ORTHO05D007608 3.6e-12 75.9 112 49.1
Atru.chr2.2408 Acer truncatum HOM05D006014 ORTHO05D007608 6.9e-11 71.6 49 81.6
MCO10G118 Micromonas commoda HOM05D006014 ORTHO05D007608 4.5e-10 68.9 91 45.1
QL11p029078 Quercus lobata HOM05D006014 ORTHO05D013998 8.4e-09 64.7 63 61.9


User provided reference genes

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