Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G1398 Trochodendron aralioides HOM05D004960 ORTHO05D004696 7.4e-128 460.7 254 100.0
TAR626G1419 Trochodendron aralioides HOM05D004960 ORTHO05D004696 3.3e-80 302.4 302 66.9
TAR626G1223 Trochodendron aralioides HOM05D004960 ORTHO05D004696 8.0e-50 201.4 330 47.3
TAR626G1729 Trochodendron aralioides HOM05D004960 ORTHO05D004696 1.2e-48 197.6 332 47.0
TAR626G0702 Trochodendron aralioides HOM05D004960 ORTHO05D004696 4.0e-25 119.4 230 40.0
MBI14_g30694_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 9.3e-22 108.2 234 36.8
MBI14_g30696_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 6.0e-21 105.5 233 35.6
MBI14_g30695_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 1.5e-19 100.9 228 36.0
TAR383G0345 Trochodendron aralioides HOM05D004960 ORTHO05D004696 1.5e-19 100.9 230 39.1
TAR383G0614 Trochodendron aralioides HOM05D004960 ORTHO05D004696 4.3e-19 99.4 236 38.6
Dinv41298 Davidia involucrata HOM05D004960 ORTHO05D004696 7.3e-19 98.6 115 51.3
MBI14_g30701_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 9.6e-19 98.2 243 35.8
TAR383G0876 Trochodendron aralioides HOM05D004960 ORTHO05D004696 9.6e-19 98.2 236 38.1
MBI14_g30692_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 1.3e-15 87.8 242 33.9
ATR0580G174 Amborella trichopoda HOM05D004960 ORTHO05D004696 3.8e-15 86.3 235 31.1
Aqoxy7G03208 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 2.4e-14 83.6 234 32.9
Aqoxy7G03202 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 5.4e-14 82.4 230 32.2
ATR0580G065 Amborella trichopoda HOM05D004960 ORTHO05D004696 9.3e-14 81.6 235 31.1
Potri.010G250300 Populus trichocarpa HOM05D004960 ORTHO05D004696 1.2e-13 81.3 234 31.2
Actinidia38650 Actinidia chinensis HOM05D004960 ORTHO05D004696 4.6e-13 79.3 239 28.5
Cfa013540 Carpinus fangiana HOM05D004960 ORTHO05D004696 1.0e-12 78.2 237 31.2
TAR625G0177 Trochodendron aralioides HOM05D004960 ORTHO05D004696 1.3e-12 77.8 232 30.6
TWI32G0132 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 1.8e-12 77.4 260 27.7
Cc06_g13870 Coffea canephora HOM05D004960 ORTHO05D004696 2.3e-12 77.0 232 27.6
CSS0038346 Camellia sinensis var. sinensis HOM05D012567 ORTHO05D004696 3.0e-12 76.6 242 35.5
COL.COLO4_16060 Corchorus olitorius HOM05D004960 ORTHO05D004696 3.9e-12 76.3 238 31.1
TWI63G1126 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 3.9e-12 76.3 223 29.1
CSS0015847 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 5.1e-12 75.9 236 30.1
CSS0022952 Camellia sinensis var. sinensis HOM05D012567 ORTHO05D004696 6.7e-12 75.5 242 35.1
Rhsim01G0010300 Rhododendron simsii HOM05D004960 ORTHO05D004696 6.7e-12 75.5 228 29.4
Eucgr.C00202 Eucalyptus grandis HOM05D004960 ORTHO05D004696 8.7e-12 75.1 230 32.2
Haze_10109 Corylus avellana HOM05D004960 ORTHO05D004696 1.1e-11 74.7 237 30.0
Dinv43330 Davidia involucrata HOM05D004960 ORTHO05D004696 1.9e-11 73.9 235 30.2
MBI14_g30697_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 2.5e-11 73.6 223 29.6
Ciclev10008947m.g Citrus clementina HOM05D004960 ORTHO05D004696 3.3e-11 73.2 235 28.1
Nn8g40270 Nelumbo nucifera HOM05D004960 ORTHO05D004696 3.3e-11 73.2 239 30.5
Rhsim01G0010200 Rhododendron simsii HOM05D004960 ORTHO05D004696 3.3e-11 73.2 233 28.3
Ciclev10008957m.g Citrus clementina HOM05D004960 ORTHO05D004696 7.4e-11 72.0 236 27.5
Aqoxy7G03205 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 2.8e-10 70.1 231 29.0
CSS0034998 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 2.8e-10 70.1 230 26.1
Lsat_1_v5_gn_7_52621 Lactuca sativa HOM05D012567 ORTHO05D004696 3.6e-10 69.7 216 33.8
Atru.chr7.532 Acer truncatum HOM05D004960 ORTHO05D004696 1.1e-09 68.2 244 28.7
HanXRQChr03g0074171 Helianthus annuus HOM05D012567 ORTHO05D004696 1.1e-09 68.2 216 33.8
Thecc.09G162700 Theobroma cacao HOM05D004960 ORTHO05D004696 1.1e-09 68.2 239 29.3
Hma1.2p1_0921F.1_g236770 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 1.4e-09 67.8 239 29.3
Hma1.2p1_0921F.1_g236794 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 1.4e-09 67.8 239 29.3
Dinv41299 Davidia involucrata HOM05D004960 ORTHO05D004696 1.8e-09 67.4 234 29.1
Prupe.1G095900 Prunus persica HOM05D004960 ORTHO05D004696 1.8e-09 67.4 250 27.2
HanXRQChr09g0244301 Helianthus annuus HOM05D012567 ORTHO05D004696 2.4e-09 67.0 226 31.0
CSS0049948 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 3.1e-09 66.6 229 25.3
Lsat_1_v5_gn_8_65701 Lactuca sativa HOM05D004960 ORTHO05D004696 3.1e-09 66.6 236 29.7
Nn2g12577 Nelumbo nucifera HOM05D004960 ORTHO05D004696 4.0e-09 66.2 231 29.9
RcHm_v2.0_Chr4g0404711 Rosa chinensis HOM05D004960 ORTHO05D004696 5.3e-09 65.9 237 26.6
Hma1.2p1_0921F.1_g236760 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 9.0e-09 65.1 247 27.9
Hma1.2p1_0921F.1_g236792 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 9.0e-09 65.1 247 27.9
Manes.14G147200 Manihot esculenta HOM05D004960 ORTHO05D004696 9.0e-09 65.1 232 27.6
RcHm_v2.0_Chr4g0404721 Rosa chinensis HOM05D004960 ORTHO05D004696 9.0e-09 65.1 224 29.5
Oeu024903.1 Olea europaea HOM05D004960 ORTHO05D004696 1.2e-08 64.7 226 28.3
Dinv41300 Davidia involucrata HOM05D004960 ORTHO05D004696 1.5e-08 64.3 231 25.5
Thecc.09G163000 Theobroma cacao HOM05D004960 ORTHO05D004696 1.5e-08 64.3 234 26.9
TWI12G0641 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 1.5e-08 64.3 248 29.8
PSO063G2425 Papaver somniferum HOM05D004960 ORTHO05D004696 2.6e-08 63.5 231 31.2
Actinidia35989 Actinidia chinensis HOM05D004960 ORTHO05D004696 4.5e-08 62.8 166 31.3
Actinidia38795 Actinidia chinensis HOM05D004960 ORTHO05D004696 5.8e-08 62.4 223 32.7
Lsat_1_v5_gn_7_52640 Lactuca sativa HOM05D012567 ORTHO05D004696 1.3e-07 61.2 228 30.7
TWI12G0285 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 1.3e-07 61.2 211 29.9
HanXRQChr03g0074111 Helianthus annuus HOM05D012567 ORTHO05D004696 2.2e-07 60.5 230 30.4
HanXRQChr03g0074151 Helianthus annuus HOM05D012567 ORTHO05D004696 2.2e-07 60.5 230 30.4
Peaxi162Scf00457g00315 Petunia axillaris HOM05D004960 ORTHO05D004696 2.2e-07 60.5 128 33.6
Prupe.1G095800 Prunus persica HOM05D004960 ORTHO05D004696 2.2e-07 60.5 117 32.5
QL02p095902 Quercus lobata HOM05D004960 ORTHO05D004696 3.8e-07 59.7 225 27.1
Eucgr.J03153 Eucalyptus grandis HOM05D004960 ORTHO05D004696 6.4e-07 58.9 225 28.0
MBI14_g30699_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 6.4e-07 58.9 232 30.6
MD16G1263500 Malus domestica HOM05D004960 ORTHO05D004696 6.4e-07 58.9 249 28.1
Migut.J01407 Erythranthe guttata HOM05D004960 ORTHO05D004696 1.1e-06 58.2 235 26.8
Solyc07g006420.1 Solanum lycopersicum HOM05D004960 ORTHO05D004696 1.4e-06 57.8 232 26.3
CSS0018327 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 2.4e-06 57.0 229 23.6
Manes.13G066000 Manihot esculenta HOM05D004960 ORTHO05D004696 2.4e-06 57.0 231 30.3
CSS0019658 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 4.2e-06 56.2 226 32.3
ECA240G1251 Erigeron canadensis HOM05D012567 ORTHO05D004696 4.2e-06 56.2 229 31.0
MBI14_g30691_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 9.3e-06 55.1 226 32.3


User provided reference genes

Program Settings