Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G1339 Trochodendron aralioides HOM05D003951 ORTHO05D005378 8.5e-235 816.6 410 100.0
TAR383G0035 Trochodendron aralioides HOM05D003951 ORTHO05D005378 4.7e-193 677.9 362 93.4
MBI04_g14936_MAGBIO Magnolia biondii HOM05D003951 ORTHO05D005378 1.2e-180 636.7 362 86.7
Nn2g11661 Nelumbo nucifera HOM05D003951 ORTHO05D005378 1.2e-180 636.7 361 86.4
Dinv14244 Davidia involucrata HOM05D003951 ORTHO05D005378 3.0e-179 632.1 361 84.8
GSVIVG01035648001 Vitis vinifera HOM05D003951 ORTHO05D005378 8.7e-179 630.6 362 84.5
Hma1.2p1_0590F.1_g185010 Hydrangea macrophylla HOM05D003951 ORTHO05D005378 2.5e-178 629.0 362 84.5
Thecc.09G042400 Theobroma cacao HOM05D003951 ORTHO05D005378 9.6e-178 627.1 362 83.7
Dinv30270 Davidia involucrata HOM05D003951 ORTHO05D005378 2.1e-177 625.9 362 84.8
Cfa013355 Carpinus fangiana HOM05D003951 ORTHO05D005378 3.6e-177 625.2 362 85.4
Duzib187G0774 Durio zibethinus HOM05D003951 ORTHO05D005378 1.8e-176 622.9 362 82.9
CSS0015540 Camellia sinensis var. sinensis HOM05D003951 ORTHO05D005378 3.1e-176 622.1 362 82.9
Gohir.D06G093700 Gossypium hirsutum HOM05D003951 ORTHO05D005378 4.0e-176 621.7 362 82.9
Manes.03G061800 Manihot esculenta HOM05D003951 ORTHO05D005378 1.2e-175 620.2 362 82.6
QL12p029450 Quercus lobata HOM05D003951 ORTHO05D005378 3.4e-175 618.6 362 83.4
Actinidia14667 Actinidia chinensis HOM05D003951 ORTHO05D005378 7.6e-175 617.5 362 82.6
Cc06_g04830 Coffea canephora HOM05D003951 ORTHO05D005378 7.6e-175 617.5 362 81.8
Gorai.010G108200 Gossypium raimondii HOM05D003951 ORTHO05D005378 7.6e-175 617.5 361 82.5
Gohir.A06G094100 Gossypium hirsutum HOM05D003951 ORTHO05D005378 9.9e-175 617.1 362 82.3
MD08G1115900 Malus domestica HOM05D003951 ORTHO05D005378 2.9e-174 615.5 362 81.8
Aqoxy7G01531 Aquilegia oxysepala HOM05D003951 ORTHO05D005378 4.9e-174 614.8 362 81.2
Ciclev10007348m.g Citrus clementina HOM05D003951 ORTHO05D005378 8.4e-174 614.0 362 81.2
Sabra06G0187900 Salix brachista HOM05D003951 ORTHO05D005378 8.4e-174 614.0 362 81.8
Sc23g0005190 Simmondsia chinensis HOM05D003951 ORTHO05D005378 1.1e-173 613.6 377 78.2
Gorai.013G218700 Gossypium raimondii HOM05D003951 ORTHO05D005378 1.9e-173 612.8 362 82.0
MD15G1095600 Malus domestica HOM05D003951 ORTHO05D005378 1.9e-173 612.8 362 81.5
CiPaw.08G024600 Carya illinoinensis HOM05D003951 ORTHO05D005378 2.4e-173 612.5 362 82.9
Prupe.1G450600 Prunus persica HOM05D003951 ORTHO05D005378 3.2e-173 612.1 362 81.2
Potri.006G240300 Populus trichocarpa HOM05D003951 ORTHO05D005378 7.1e-173 610.9 362 81.8
Gohir.D13G192700 Gossypium hirsutum HOM05D003951 ORTHO05D005378 1.6e-172 609.8 362 81.8
Cpa.g.sc7.257 Carica papaya HOM05D003951 ORTHO05D005378 2.1e-172 609.4 362 80.9
Gohir.A13G186000 Gossypium hirsutum HOM05D003951 ORTHO05D005378 2.7e-172 609.0 362 81.8
RcHm_v2.0_Chr6g0305971 Rosa chinensis HOM05D003951 ORTHO05D005378 2.7e-172 609.0 363 81.0
arahy.Tifrunner.gnm1.ann1.6KB6B4 Arachis hypogaea HOM05D003951 ORTHO05D005378 6.0e-172 607.8 362 79.6
TWI32G0786 Tripterygium wilfordii HOM05D003951 ORTHO05D005378 6.0e-172 607.8 362 79.8
Potri.018G039800 Populus trichocarpa HOM05D003951 ORTHO05D005378 1.0e-171 607.1 362 80.4
Hund19527 Selenicereus undatus HOM05D003951 ORTHO05D005378 1.0e-171 607.1 362 80.1
Atru.chr7.2135 Acer truncatum HOM05D003951 ORTHO05D005378 1.3e-171 606.7 361 80.6
Glyma.04G082000 Glycine max HOM05D003951 ORTHO05D005378 1.3e-171 606.7 362 80.7
Glyma.06G083700 Glycine max HOM05D003951 ORTHO05D005378 2.3e-171 605.9 362 80.7
VMungo1309G1090 Vigna mungo HOM05D003951 ORTHO05D005378 3.9e-171 605.1 362 79.3
arahy.Tifrunner.gnm1.ann1.ZA6ZKK Arachis hypogaea HOM05D003951 ORTHO05D005378 5.1e-171 604.7 362 79.3
Oeu038879.1 Olea europaea HOM05D003951 ORTHO05D005378 6.6e-171 604.4 362 80.7
FAN15G0863 Fragaria x ananassa HOM05D003951 ORTHO05D005378 8.7e-171 604.0 363 80.2
FvH4_2g35850 Fragaria vesca HOM05D003951 ORTHO05D005378 1.5e-170 603.2 363 80.2
FAN27G3265 Fragaria x ananassa HOM05D003951 ORTHO05D005378 1.5e-170 603.2 363 80.2
MSTRG.19211 Avicennia marina HOM05D003951 ORTHO05D005378 2.5e-170 602.4 362 80.4
Lj8A588G18 Lonicera japonica HOM05D003951 ORTHO05D005378 5.6e-170 601.3 362 79.8
Eucgr.C02905 Eucalyptus grandis HOM05D003951 ORTHO05D005378 9.6e-170 600.5 362 79.6
Psat5g022720 Pisum sativum HOM05D003951 ORTHO05D005378 9.6e-170 600.5 362 78.7
Nitab4.5_0010350g0010 Nicotiana tabacum HOM05D003951 ORTHO05D005378 1.6e-169 599.7 362 78.5
ECA233G3193 Erigeron canadensis HOM05D003951 ORTHO05D005378 2.1e-169 599.4 362 79.6
Sabra18G0039700 Salix brachista HOM05D003951 ORTHO05D005378 4.8e-169 598.2 373 77.5
Gohir.D08G272000 Gossypium hirsutum HOM05D003951 ORTHO05D005378 6.2e-169 597.8 362 80.4
Gorai.004G290400 Gossypium raimondii HOM05D003951 ORTHO05D005378 6.2e-169 597.8 362 80.4
Ca_15606_v3 Cicer arietinum L. HOM05D003951 ORTHO05D005378 1.1e-168 597.0 362 78.2
FAN20G1017 Fragaria x ananassa HOM05D003951 ORTHO05D005378 1.1e-168 597.0 363 79.3
Medtr3g110090 Medicago truncatula HOM05D003951 ORTHO05D005378 1.1e-168 597.0 362 78.7
Medtr3g110140 Medicago truncatula HOM05D003951 ORTHO05D005378 1.1e-168 597.0 362 78.7
Nitab4.5_0008726g0020 Nicotiana tabacum HOM05D003951 ORTHO05D005378 1.4e-168 596.7 362 77.3
Phvul.009G107800 Phaseolus vulgaris HOM05D003951 ORTHO05D005378 1.8e-168 596.3 362 77.9
Lalb_Chr08g0243161 Lupinus albus HOM05D003951 ORTHO05D005378 2.4e-168 595.9 362 78.5
EL10Ac2g04048 Beta vulgaris HOM05D003951 ORTHO05D005378 3.1e-168 595.5 362 78.2
Lj1g0011830 Lotus japonicus HOM05D003951 ORTHO05D005378 3.1e-168 595.5 362 78.7
Gohir.A08G250500 Gossypium hirsutum HOM05D003951 ORTHO05D005378 4.0e-168 595.1 361 80.3
CANSAT25G2930 Cannabis sativa HOM05D003951 ORTHO05D005378 6.9e-168 594.3 362 79.3
Thhalv10012570m.g Eutrema salsugineum HOM05D003951 ORTHO05D005378 9.0e-168 594.0 362 78.2
PSO210G7231 Papaver somniferum HOM05D003951 ORTHO05D005378 1.5e-167 593.2 360 80.3
Aa31LG3G15640 Aethionema arabicum HOM05D003951 ORTHO05D005378 2.0e-167 592.8 362 77.3
Nitab4.5_0000132g0420 Nicotiana tabacum HOM05D003951 ORTHO05D005378 2.0e-167 592.8 362 77.3
TPR.G1335 Trifolium pratense HOM05D003951 ORTHO05D005378 2.0e-167 592.8 362 77.6
Sp6g32040 Schrenkiella parvula HOM05D003951 ORTHO05D005378 3.4e-167 592.0 362 77.9
PSO210G0075 Papaver somniferum HOM05D003951 ORTHO05D005378 4.5e-167 591.7 360 80.0
SalBow3G1921 Salvia bowleyana HOM05D003951 ORTHO05D005378 4.5e-167 591.7 362 79.0
BcaB08g37043 Brassica carinata HOM05D003951 ORTHO05D005378 5.8e-167 591.3 362 77.9
BcaNung01934 Brassica carinata HOM05D003951 ORTHO05D005378 5.8e-167 591.3 362 77.6
Oeu017004.2 Olea europaea HOM05D003951 ORTHO05D005378 7.6e-167 590.9 391 74.9
THA.LOC104814774 Tarenaya hassleriana HOM05D003951 ORTHO05D005378 7.6e-167 590.9 362 78.5
BcaC04g19214 Brassica carinata HOM05D003951 ORTHO05D005378 1.3e-166 590.1 362 77.9
C09p65250 Brassica napus HOM05D003951 ORTHO05D005378 1.3e-166 590.1 362 77.9
A10p26200 Brassica napus HOM05D003951 ORTHO05D005378 1.7e-166 589.7 362 77.6
BraA10t44677Z Brassica rapa HOM05D003951 ORTHO05D005378 1.7e-166 589.7 362 77.6
Migut.J00480 Erythranthe guttata HOM05D003951 ORTHO05D005378 1.7e-166 589.7 362 78.5
Lalb_Chr23g0269551 Lupinus albus HOM05D003951 ORTHO05D005378 2.2e-166 589.3 362 78.2
BcaC03g13375 Brassica carinata HOM05D003951 ORTHO05D005378 3.8e-166 588.6 362 77.1
CARHR201660 Cardamine hirsuta HOM05D003951 ORTHO05D005378 4.9e-166 588.2 362 77.3
AUR62009306 Chenopodium quinoa HOM05D003951 ORTHO05D005378 4.9e-166 588.2 362 76.8
CsaV3_2G030980 Cucumis sativus L. HOM05D003951 ORTHO05D005378 4.9e-166 588.2 362 77.6
ATR0315G102 Amborella trichopoda HOM05D003951 ORTHO05D005378 6.4e-166 587.8 362 78.2
Sopen09g003410 Solanum pennellii HOM05D003951 ORTHO05D005378 8.4e-166 587.4 362 75.4
BolC9t59353H Brassica oleracea HOM05D003951 ORTHO05D005378 1.1e-165 587.0 362 77.6
AUR62043518 Chenopodium quinoa HOM05D003951 ORTHO05D005378 1.1e-165 587.0 362 76.5
PGR044G0887 Punica granatum HOM05D003951 ORTHO05D005378 1.1e-165 587.0 362 78.2
Peaxi162Scf01195g00118 Petunia axillaris HOM05D003951 ORTHO05D005378 1.4e-165 586.6 364 76.9
PGSC0003DMG400012982 Solanum tuberosum HOM05D003951 ORTHO05D005378 1.9e-165 586.3 362 75.1
AUR62041721 Chenopodium quinoa HOM05D003951 ORTHO05D005378 2.4e-165 585.9 362 76.2
MELO3C011151.2 Cucumis melo HOM05D003951 ORTHO05D005378 2.4e-165 585.9 362 77.1
AT5G11560 Arabidopsis thaliana HOM05D003951 ORTHO05D005378 4.2e-165 585.1 362 76.8
Ah.10g035090 Amaranthus hybridus HOM05D003951 ORTHO05D005378 9.3e-165 583.9 362 76.2
BolC2t06471H Brassica oleracea HOM05D003951 ORTHO05D005378 9.3e-165 583.9 362 77.1
Sed0024259 Sechium edule HOM05D003951 ORTHO05D005378 9.3e-165 583.9 362 76.5
DCAR_004489 Daucus carota HOM05D003951 ORTHO05D005378 1.2e-164 583.6 436 68.1
Lsat_1_v5_gn_6_63741 Lactuca sativa HOM05D003951 ORTHO05D005378 1.2e-164 583.6 371 76.8
vmacro10453 Vaccinium macrocarpon HOM05D003951 ORTHO05D005378 1.2e-164 583.6 373 78.0
AL6G22230 Arabidopsis lyrata HOM05D003951 ORTHO05D005378 1.6e-164 583.2 362 76.5
C02p05210 Brassica napus HOM05D003951 ORTHO05D005378 1.6e-164 583.2 362 76.5
CAN.G1759.1 Capsicum annuum HOM05D003951 ORTHO05D005378 2.7e-164 582.4 363 76.0
Sed0007642 Sechium edule HOM05D003951 ORTHO05D005378 6.0e-164 581.3 362 76.0
Ah.16g105530 Amaranthus hybridus HOM05D003951 ORTHO05D005378 1.0e-163 580.5 362 76.8
Solyc09g008610.4 Solanum lycopersicum HOM05D003951 ORTHO05D005378 1.3e-163 580.1 362 74.6
HanXRQChr08g0221151 Helianthus annuus HOM05D003951 ORTHO05D005378 2.3e-163 579.3 362 77.9
Carub.0006s1003 Capsella rubella HOM05D003951 ORTHO05D005378 1.1e-162 577.0 362 76.2
Os05g0230600 Oryza sativa ssp. japonica HOM05D003951 ORTHO05D005378 7.4e-162 574.3 362 76.0
CANSAT56G2409 Cannabis sativa HOM05D003951 ORTHO05D005378 9.6e-162 573.9 365 76.4
ClCG08G012310 Citrullus lanatus HOM05D003951 ORTHO05D005378 1.3e-161 573.5 368 75.8
CANSAT56G0789 Cannabis sativa HOM05D003951 ORTHO05D005378 4.5e-159 565.1 365 76.2
Zm00001eb350390 Zea mays HOM05D003951 ORTHO05D005378 4.5e-159 565.1 362 74.3
SHI18663 Sapria himalayana HOM05D003951 ORTHO05D005378 6.5e-158 561.2 363 74.7
SGA_v2.0_scaffold40G15445 Striga asiatica HOM05D003951 ORTHO05D005378 1.1e-157 560.5 349 77.1
SGA_v2.0_scaffold657G53382 Striga asiatica HOM05D003951 ORTHO05D005378 1.1e-157 560.5 349 77.1
CDE09G1231 Ceratophyllum demersum HOM05D003951 ORTHO05D005378 1.9e-157 559.7 362 73.8
COL.COLO4_18674 Corchorus olitorius HOM05D003951 ORTHO05D005378 2.3e-155 552.7 322 82.3
Zm00001eb284300 Zea mays HOM05D003951 ORTHO05D005378 4.3e-154 548.5 362 73.5
BraA02t05087Z Brassica rapa HOM05D003951 ORTHO05D005378 5.3e-152 541.6 362 72.9
CDE02G1137 Ceratophyllum demersum HOM05D003951 ORTHO05D005378 1.2e-151 540.4 342 76.3
Haze_16527 Corylus avellana HOM05D003951 ORTHO05D005378 8.2e-145 517.7 295 87.5
Lj7C704T11 Lonicera japonica HOM05D003951 ORTHO05D005378 3.4e-143 512.3 295 86.1
Ah.16g105420 Amaranthus hybridus HOM05D003951 ORTHO05D005378 3.4e-135 485.7 391 63.7
Mapoly0001s0045 Marchantia polymorpha HOM05D003951 ORTHO05D005378 2.9e-134 482.6 365 64.1
A02p01070 Brassica napus HOM05D003951 ORTHO05D005378 1.6e-132 476.9 362 66.3
Gohir.A08G250566 Gossypium hirsutum HOM05D003951 ORTHO05D005378 7.9e-132 474.6 281 82.9
Pp3c24_6940 Physcomitrium patens HOM05D003951 ORTHO05D005378 6.7e-131 471.5 365 62.2
Nitab4.5_0004281g0080 Nicotiana tabacum HOM05D003951 ORTHO05D005378 7.7e-127 458.0 276 76.4
SMO361G0709 Selaginella moellendorffii HOM05D003951 ORTHO05D005378 1.5e-122 443.7 362 59.1
HPP92_003925 Vanilla planifolia HOM05D003951 ORTHO05D005378 1.2e-84 317.8 280 60.4
MCO05G363 Micromonas commoda HOM05D003951 ORTHO05D005378 1.6e-76 290.8 356 42.7
AagrBONN_evm.TU.Sc2ySwM_228.1359 Anthoceros agrestis HOM05D003951 ORTHO05D005378 5.1e-70 269.2 257 48.2
PRCOL_00001466 Prasinoderma coloniale HOM05D003951 ORTHO05D005378 3.3e-69 266.5 368 40.8
Nn3g18131 Nelumbo nucifera HOM05D003951 ORTHO05D005378 2.4e-59 233.8 147 84.4
Cre01.g042550 Chlamydomonas reinhardtii HOM05D003951 ORTHO05D005378 3.4e-58 229.9 325 40.0
Actinidia15735 Actinidia chinensis HOM05D003951 ORTHO05D005378 1.7e-57 227.6 134 79.1
CBR_g46226 Chara braunii HOM05D003951 ORTHO05D005378 1.0e-54 218.4 184 58.2
Actinidia31233 Actinidia chinensis HOM05D006865 ORTHO05D009005 3.3e-53 213.4 140 73.6
BcaB01g05473 Brassica carinata HOM05D003951 ORTHO05D005378 7.3e-53 212.2 128 78.9
C03p05840 Brassica napus HOM05D003951 ORTHO05D005378 8.1e-52 208.8 124 80.6
BolC3t13096H Brassica oleracea HOM05D003951 ORTHO05D005378 7.9e-47 192.2 124 76.6
DCAR_004486 Daucus carota HOM05D003951 ORTHO05D035008 8.7e-46 188.7 105 84.8
Peaxi162Scf00110g00822 Petunia axillaris HOM05D003951 ORTHO05D005378 1.6e-39 167.9 200 52.0
CBR_g46228 Chara braunii HOM05D000019 ORTHO05D000048 5.7e-37 159.5 176 44.3
vmacro07087 Vaccinium macrocarpon HOM05D003951 ORTHO05D005378 1.0e-33 148.7 241 41.5
Cfa023291 Carpinus fangiana HOM05D003951 ORTHO05D005378 5.5e-32 142.9 323 31.0
Hma1.2p1_1163F.1_g262780 Hydrangea macrophylla HOM05D003951 ORTHO05D033496 3.0e-30 137.1 84 82.1
A03p05100 Brassica napus HOM05D003951 ORTHO05D033496 6.7e-22 109.4 121 56.2
BraA03t09844Z Brassica rapa HOM05D003951 ORTHO05D033496 6.7e-22 109.4 121 56.2
Haze_16526 Corylus avellana HOM05D003951 ORTHO05D005378 3.3e-21 107.1 70 70.0
Peaxi162Scf00110g00821 Petunia axillaris HOM05D003951 ORTHO05D035008 1.4e-19 101.7 82 58.5
Ah.04g155890 Amaranthus hybridus HOM05D003518 ORTHO05D031015 5.9e-18 96.3 60 75.0
CiPaw.07G205600 Carya illinoinensis HOM05D003951 ORTHO05D005378 5.9e-18 96.3 64 67.2
Dinv34398 Davidia involucrata HOM05D003951 ORTHO05D005378 5.9e-18 96.3 63 76.2
Lj7A704G78 Lonicera japonica HOM05D003951 ORTHO05D005378 1.0e-17 95.5 69 58.0
Ah.05g173020 Amaranthus hybridus HOM05D003951 ORTHO05D031015 1.9e-16 91.3 95 51.6
Ah.05g172920 Amaranthus hybridus HOM05D003951 ORTHO05D031015 4.2e-16 90.1 95 51.6
CAN.G541.23 Capsicum annuum HOM05D004796 ORTHO05D006527 9.4e-16 89.0 52 76.9
Ah.16g105540 Amaranthus hybridus HOM05D003951 ORTHO05D005378 7.9e-15 85.9 67 55.2


User provided reference genes

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