Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G1126 Trochodendron aralioides HOM05D005256 ORTHO05D006491 2.2e-74 282.7 202 100.0
TAR624G1249 Trochodendron aralioides HOM05D005256 ORTHO05D006491 1.9e-54 216.5 131 87.8
Nn1g09867 Nelumbo nucifera HOM05D005256 ORTHO05D006491 3.6e-53 212.2 132 85.6
CiPaw.09G140800 Carya illinoinensis HOM05D005256 ORTHO05D006491 6.2e-53 211.5 131 82.4
Atru.chr10.203 Acer truncatum HOM05D005256 ORTHO05D006491 3.1e-52 209.1 131 83.2
CSS0021462 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 3.4e-51 205.7 132 80.3
QL11p010746 Quercus lobata HOM05D005256 ORTHO05D006491 9.9e-51 204.1 132 80.3
GSVIVG01001340001 Vitis vinifera HOM05D005256 ORTHO05D006491 1.3e-50 203.8 131 81.7
Dinv07938 Davidia involucrata HOM05D005256 ORTHO05D006491 1.7e-50 203.4 131 81.7
Dinv18415 Davidia involucrata HOM05D005256 ORTHO05D006491 1.7e-50 203.4 131 81.7
Eucgr.D00001 Eucalyptus grandis HOM05D005256 ORTHO05D006491 3.7e-50 202.2 202 66.3
Potri.003G157100 Populus trichocarpa HOM05D005256 ORTHO05D006491 3.7e-50 202.2 132 80.3
Sabra03G0114000 Salix brachista HOM05D005256 ORTHO05D006491 6.4e-50 201.4 132 80.3
Haze_05185 Corylus avellana HOM05D005256 ORTHO05D006491 1.1e-49 200.7 131 80.2
Glyma.09G047200 Glycine max HOM05D005256 ORTHO05D006491 2.4e-49 199.5 131 81.7
Glyma.15G154700 Glycine max HOM05D005256 ORTHO05D006491 2.4e-49 199.5 131 81.7
EL10Ac7g17298 Beta vulgaris HOM05D005256 ORTHO05D006491 5.4e-49 198.4 131 77.1
Lj6g0014214 Lotus japonicus HOM05D005256 ORTHO05D006491 9.2e-49 197.6 131 80.9
Peaxi162Scf00888g00114 Petunia axillaris HOM05D005256 ORTHO05D006491 1.2e-48 197.2 131 78.6
CSS0003949 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 1.6e-48 196.8 131 77.1
Manes.16G060225 Manihot esculenta HOM05D005256 ORTHO05D006491 1.6e-48 196.8 132 78.0
Rhsim13G0136300 Rhododendron simsii HOM05D005256 ORTHO05D006491 2.1e-48 196.4 131 76.3
PGSC0003DMG400011293 Solanum tuberosum HOM05D005256 ORTHO05D006491 4.6e-48 195.3 132 77.3
Sabra01G0052200 Salix brachista HOM05D005256 ORTHO05D006491 6.0e-48 194.9 132 78.0
Solyc10g005100.3 Solanum lycopersicum HOM05D005256 ORTHO05D006491 7.8e-48 194.5 131 76.3
Ciclev10016618m.g Citrus clementina HOM05D005256 ORTHO05D006491 1.0e-47 194.1 133 78.9
Sopen10g001120 Solanum pennellii HOM05D005256 ORTHO05D006491 1.3e-47 193.7 131 75.6
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea HOM05D005256 ORTHO05D006491 3.0e-47 192.6 131 77.1
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea HOM05D005256 ORTHO05D006491 3.0e-47 192.6 131 77.1
Medtr2g437530 Medicago truncatula HOM05D005256 ORTHO05D006491 3.9e-47 192.2 131 77.9
Potri.001G073900 Populus trichocarpa HOM05D005256 ORTHO05D006491 3.9e-47 192.2 133 78.2
CAN.G465.5 Capsicum annuum HOM05D005256 ORTHO05D006491 5.1e-47 191.8 132 75.8
Nitab4.5_0004778g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 6.6e-47 191.4 131 75.6
MBI07_g44405_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.1e-46 190.7 131 77.9
TPR.G31382 Trifolium pratense HOM05D005256 ORTHO05D006491 1.1e-46 190.7 131 75.6
CANSAT35G0328 Cannabis sativa HOM05D005256 ORTHO05D006491 1.5e-46 190.3 132 75.0
MD05G1242300 Malus domestica HOM05D005256 ORTHO05D006491 1.5e-46 190.3 132 78.8
Lsat_1_v5_gn_2_59820 Lactuca sativa HOM05D005256 ORTHO05D006491 3.3e-46 189.1 132 75.8
TWI63G0333 Tripterygium wilfordii HOM05D005256 ORTHO05D006491 4.3e-46 188.7 130 75.4
Cpa.g.sc30.65 Carica papaya HOM05D005256 ORTHO05D006491 7.3e-46 188.0 132 74.2
Psat1g152160 Pisum sativum HOM05D005256 ORTHO05D006491 9.6e-46 187.6 131 75.6
Prupe.4G121100 Prunus persica HOM05D005256 ORTHO05D006491 9.6e-46 187.6 133 77.4
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla HOM05D005256 ORTHO05D006491 1.2e-45 187.2 131 75.6
Oeu005126.1 Olea europaea HOM05D005256 ORTHO05D006491 1.2e-45 187.2 129 75.2
COL.COLO4_25022 Corchorus olitorius HOM05D005256 ORTHO05D006491 2.1e-45 186.4 132 74.2
Hund20133 Selenicereus undatus HOM05D005256 ORTHO05D006491 2.1e-45 186.4 132 71.2
CiPaw.10G108500 Carya illinoinensis HOM05D005256 ORTHO05D006491 3.6e-45 185.7 127 76.4
MBI06_g04184_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 6.2e-45 184.9 126 77.0
Phvul.009G245700 Phaseolus vulgaris HOM05D005256 ORTHO05D006491 1.4e-44 183.7 131 74.0
Ah.15g091820 Amaranthus hybridus HOM05D005256 ORTHO05D006491 1.8e-44 183.3 132 72.7
Lalb_Chr15g0083621 Lupinus albus HOM05D005256 ORTHO05D006491 1.8e-44 183.3 131 75.6
vmacro03574 Vaccinium macrocarpon HOM05D005256 ORTHO05D006491 1.8e-44 183.3 131 74.0
Sc17g0004300 Simmondsia chinensis HOM05D005256 ORTHO05D006491 2.4e-44 183.0 132 71.2
Lalb_Chr18g0051841 Lupinus albus HOM05D005256 ORTHO05D006491 3.1e-44 182.6 132 75.8
MD10G1224100 Malus domestica HOM05D005256 ORTHO05D006491 4.0e-44 182.2 132 75.8
CDE02G1470 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 6.8e-44 181.4 132 72.0
AUR62040985 Chenopodium quinoa HOM05D005256 ORTHO05D006491 6.8e-44 181.4 131 73.3
ATR0737G015 Amborella trichopoda HOM05D005256 ORTHO05D006491 1.2e-43 180.6 131 75.6
Ca_02405_v3 Cicer arietinum L. HOM05D005256 ORTHO05D006491 1.2e-43 180.6 132 72.7
CDE10G0480 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.5e-43 180.3 132 70.5
Thecc.02G000700 Theobroma cacao HOM05D005256 ORTHO05D006491 1.5e-43 180.3 126 73.0
VMungo1309G1298 Vigna mungo HOM05D005256 ORTHO05D006491 1.5e-43 180.3 132 74.2
Oeu052922.1 Olea europaea HOM05D005256 ORTHO05D006491 7.6e-43 177.9 131 68.7
HanXRQChr14g0439031 Helianthus annuus HOM05D005256 ORTHO05D006491 9.9e-43 177.6 132 72.0
CDE10G1097 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.7e-42 176.8 130 70.0
AT4G20260 Arabidopsis thaliana HOM05D005256 ORTHO05D006491 3.8e-42 175.6 130 70.8
CARHR227090 Cardamine hirsuta HOM05D005256 ORTHO05D006491 3.8e-42 175.6 130 69.2
RcHm_v2.0_Chr5g0022081 Rosa chinensis HOM05D005256 ORTHO05D006491 3.8e-42 175.6 132 72.7
ECA238G2220 Erigeron canadensis HOM05D005256 ORTHO05D006491 6.4e-42 174.9 132 72.7
Aa31LG6G2690 Aethionema arabicum HOM05D005256 ORTHO05D006491 1.1e-41 174.1 132 65.9
THA.LOC104812925 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 1.1e-41 174.1 130 71.5
SalBow7G1744 Salvia bowleyana HOM05D005256 ORTHO05D006491 1.4e-41 173.7 131 69.5
Thhalv10026094m.g Eutrema salsugineum HOM05D005256 ORTHO05D006491 1.9e-41 173.3 130 67.7
Lsat_1_v5_gn_8_107621 Lactuca sativa HOM05D005256 ORTHO05D006491 2.4e-41 172.9 131 69.5
MSTRG.14820 Avicennia marina HOM05D005256 ORTHO05D006491 3.2e-41 172.6 131 72.5
AL7G33640 Arabidopsis lyrata HOM05D005256 ORTHO05D006491 4.2e-41 172.2 130 68.5
Migut.L00006 Erythranthe guttata HOM05D005256 ORTHO05D006491 4.2e-41 172.2 131 71.0
FvH4_3g13370 Fragaria vesca HOM05D005256 ORTHO05D006491 7.1e-41 171.4 132 70.5
FAN11G1371 Fragaria x ananassa HOM05D005256 ORTHO05D006491 7.1e-41 171.4 132 70.5
FAN25G1093 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.6e-40 170.2 132 70.5
BcaC09g51326 Brassica carinata HOM05D005256 ORTHO05D006491 2.1e-40 169.9 130 67.7
A01p11960 Brassica napus HOM05D005256 ORTHO05D006491 2.1e-40 169.9 130 67.7
C01p14230 Brassica napus HOM05D005256 ORTHO05D006491 2.1e-40 169.9 130 67.7
BolC1t01388H Brassica oleracea HOM05D005256 ORTHO05D006491 2.1e-40 169.9 130 67.7
BraA01t01138Z Brassica rapa HOM05D005256 ORTHO05D006491 2.1e-40 169.9 130 67.7
HanXRQChr15g0487481 Helianthus annuus HOM05D005256 ORTHO05D006491 2.1e-40 169.9 131 68.7
FAN16G0515 Fragaria x ananassa HOM05D005256 ORTHO05D006491 2.7e-40 169.5 132 69.7
FAN21G0853 Fragaria x ananassa HOM05D005256 ORTHO05D006491 4.6e-40 168.7 132 69.7
Carub.0007s2091 Capsella rubella HOM05D005256 ORTHO05D006491 6.0e-40 168.3 130 65.4
Peaxi162Scf01310g00311 Petunia axillaris HOM05D005256 ORTHO05D006491 6.0e-40 168.3 131 67.9
HPP92_008810 Vanilla planifolia HOM05D005256 ORTHO05D006491 6.0e-40 168.3 130 70.8
C07p50830 Brassica napus HOM05D005256 ORTHO05D006491 1.7e-39 166.8 130 65.4
BolC7t45581H Brassica oleracea HOM05D005256 ORTHO05D006491 1.7e-39 166.8 130 65.4
BcaNung03497 Brassica carinata HOM05D005256 ORTHO05D006491 2.3e-39 166.4 130 65.4
BraA03t14315Z Brassica rapa HOM05D005256 ORTHO05D006491 3.0e-39 166.0 130 64.6
BcaC06g30648 Brassica carinata HOM05D005256 ORTHO05D006491 3.9e-39 165.6 130 64.6
A03p52380 Brassica napus HOM05D005256 ORTHO05D006491 3.9e-39 165.6 130 64.6
Sp7g18620 Schrenkiella parvula HOM05D005256 ORTHO05D006491 3.9e-39 165.6 130 66.2
ECA232G1901 Erigeron canadensis HOM05D005256 ORTHO05D006491 2.5e-38 162.9 131 67.2
THA.LOC104811953 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 2.5e-38 162.9 130 66.2
PSO541G2657 Papaver somniferum HOM05D005256 ORTHO05D006491 4.3e-38 162.2 131 63.4
PSO675G8904 Papaver somniferum HOM05D005256 ORTHO05D006491 4.3e-38 162.2 131 63.4
Cc09_g04590 Coffea canephora HOM05D005256 ORTHO05D006491 9.6e-38 161.0 127 65.4
AUR62042105 Chenopodium quinoa HOM05D005256 ORTHO05D006491 3.6e-37 159.1 114 72.8
CDE09G1225 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 8.1e-37 157.9 132 65.2
FAN25G0981 Fragaria x ananassa HOM05D005256 ORTHO05D006491 8.1e-37 157.9 132 68.2
BcaNung03716 Brassica carinata HOM05D005256 ORTHO05D006491 1.3e-34 150.6 126 64.3
Nitab4.5_0000217g0040 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.3e-34 150.6 131 64.9
HanXRQChr09g0257711 Helianthus annuus HOM05D005256 ORTHO05D006491 1.4e-33 147.1 131 61.1
C07p27480 Brassica napus HOM05D005256 ORTHO05D006491 3.2e-33 146.0 132 61.4
Os02g0285300 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 4.2e-33 145.6 132 62.1
BcaC06g34533 Brassica carinata HOM05D005256 ORTHO05D006491 9.3e-33 144.4 132 60.6
BolC7t43278H Brassica oleracea HOM05D005256 ORTHO05D006491 1.6e-32 143.7 132 60.6
A06p47070 Brassica napus HOM05D005256 ORTHO05D006491 2.7e-32 142.9 132 60.6
BraA06t27579Z Brassica rapa HOM05D005256 ORTHO05D006491 2.7e-32 142.9 132 60.6
BcaC04g21824 Brassica carinata HOM05D005256 ORTHO05D006491 1.0e-31 141.0 134 57.5
C09p27010 Brassica napus HOM05D005256 ORTHO05D006491 1.0e-31 141.0 134 57.5
BolC9t55584H Brassica oleracea HOM05D005256 ORTHO05D006491 1.0e-31 141.0 134 57.5
Aa31LG9G8540 Aethionema arabicum HOM05D005256 ORTHO05D006491 1.3e-31 140.6 130 56.9
BcaB07g30517 Brassica carinata HOM05D005256 ORTHO05D006491 3.0e-31 139.4 133 60.2
A09p21180 Brassica napus HOM05D005256 ORTHO05D006491 6.6e-31 138.3 134 56.7
BraA09t37724Z Brassica rapa HOM05D005256 ORTHO05D006491 6.6e-31 138.3 134 56.7
Nitab4.5_0001253g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 6.6e-31 138.3 131 61.8
Nitab4.5_0012748g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 2.5e-30 136.3 97 74.2
BcaB07g30940 Brassica carinata HOM05D005256 ORTHO05D006491 3.3e-30 136.0 134 56.0
DCAR_003732 Daucus carota HOM05D005256 ORTHO05D006491 1.1e-28 131.0 131 54.2
MBI06_g26562_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.8e-28 130.2 89 76.4
Sp2g09430 Schrenkiella parvula HOM05D005256 ORTHO05D006491 4.0e-28 129.0 134 54.5
Zm00001eb236850 Zea mays HOM05D005256 ORTHO05D006491 3.8e-26 122.5 114 63.2
Zm00001eb339340 Zea mays HOM05D005256 ORTHO05D006491 2.7e-24 116.3 128 55.5
Os01g0233000 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 6.0e-24 115.2 128 53.9
C02p45090 Brassica napus HOM05D005256 ORTHO05D006491 7.9e-24 114.8 133 54.1
BolC2t10548H Brassica oleracea HOM05D005256 ORTHO05D006491 7.9e-24 114.8 133 54.1
Zm00001eb119130 Zea mays HOM05D005256 ORTHO05D006491 3.9e-23 112.5 128 53.1
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 2.5e-17 93.2 67 76.1
Lalb_Chr20g0114421 Lupinus albus HOM05D005256 ORTHO05D006491 5.5e-17 92.0 64 73.4
Lsat_1_v5_gn_9_9820 Lactuca sativa HOM05D005256 ORTHO05D006491 2.1e-16 90.1 97 57.7
Zm00001eb381370 Zea mays HOM05D005256 ORTHO05D006491 6.7e-07 58.5 69 53.6
FvH4_7g19390 Fragaria vesca HOM05D036880 ORTHO05D006491 1.9e-06 57.0 55 56.4
Mapoly0087s0006 Marchantia polymorpha HOM05D005256 ORTHO05D006491 2.5e-06 56.6 131 33.6
AagrBONN_evm.TU.Sc2ySwM_117.2481 Anthoceros agrestis HOM05D005256 ORTHO05D006491 5.7e-06 55.5 98 29.6


User provided reference genes

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