Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G1121 Trochodendron aralioides HOM05D004835 ORTHO05D006046 1.1e-231 806.2 408 100.0
Hma1.2p1_0091F.1_g046150 Hydrangea macrophylla HOM05D004835 ORTHO05D006046 1.8e-168 596.3 406 74.9
Ciclev10015558m.g Citrus clementina HOM05D004835 ORTHO05D006046 6.4e-166 587.8 386 76.9
CSS0008490 Camellia sinensis var. sinensis HOM05D004835 ORTHO05D006046 1.1e-165 587.0 407 73.7
CiPaw.10G068200 Carya illinoinensis HOM05D004835 ORTHO05D006046 5.4e-165 584.7 372 78.5
Lj1A1224G37 Lonicera japonica HOM05D004835 ORTHO05D006046 2.7e-164 582.4 413 74.1
PGR004G0955 Punica granatum HOM05D004835 ORTHO05D006046 4.6e-164 581.6 411 72.5
Gorai.010G176900 Gossypium raimondii HOM05D004835 ORTHO05D006046 8.7e-163 577.4 372 77.2
QL05p075217 Quercus lobata HOM05D004835 ORTHO05D006046 2.5e-162 575.9 407 71.7
Atru.chr10.2145 Acer truncatum HOM05D004835 ORTHO05D006046 7.3e-162 574.3 384 75.8
vmacro03709 Vaccinium macrocarpon HOM05D004835 ORTHO05D006046 7.3e-162 574.3 412 72.1
Eucgr.D00815 Eucalyptus grandis HOM05D004835 ORTHO05D006046 1.6e-161 573.2 377 77.2
Gohir.A06G145700 Gossypium hirsutum HOM05D004835 ORTHO05D006046 1.6e-161 573.2 375 76.5
Cfa000278 Carpinus fangiana HOM05D004835 ORTHO05D006046 2.1e-161 572.8 438 67.8
Haze_06737 Corylus avellana HOM05D004835 ORTHO05D006046 1.4e-160 570.1 438 67.6
Nn1g07024 Nelumbo nucifera HOM05D004835 ORTHO05D006046 1.4e-160 570.1 370 77.3
Actinidia26949 Actinidia chinensis HOM05D004835 ORTHO05D006046 1.8e-160 569.7 407 71.5
Sabra04G0012600 Salix brachista HOM05D004835 ORTHO05D006046 3.1e-160 568.9 391 74.4
MBI02_g10099_MAGBIO Magnolia biondii HOM05D004835 ORTHO05D006046 6.9e-160 567.8 417 71.0
Prupe.4G026400 Prunus persica HOM05D004835 ORTHO05D006046 3.4e-159 565.5 410 72.0
Haze_06733 Corylus avellana HOM05D004835 ORTHO05D006046 9.9e-159 563.9 397 71.8
Rhsim13G0157800 Rhododendron simsii HOM05D004835 ORTHO05D006046 1.7e-158 563.1 409 71.6
Potri.004G022900 Populus trichocarpa HOM05D004835 ORTHO05D006046 3.8e-158 562.0 392 74.0
Manes.16G012700 Manihot esculenta HOM05D004835 ORTHO05D006046 1.9e-157 559.7 372 74.5
COL.COLO4_31722 Corchorus olitorius HOM05D004835 ORTHO05D006046 2.4e-157 559.3 375 74.7
Thecc.06G213800 Theobroma cacao HOM05D004835 ORTHO05D006046 2.7e-156 555.8 374 74.1
MELO3C002484.2 Cucumis melo HOM05D004835 ORTHO05D006046 6.6e-155 551.2 410 70.7
ClCG03G004990 Citrullus lanatus HOM05D004835 ORTHO05D006046 8.7e-155 550.8 388 74.0
Gohir.D06G151600 Gossypium hirsutum HOM05D004835 ORTHO05D006046 1.5e-154 550.1 372 74.7
MD05G1340900 Malus domestica HOM05D004835 ORTHO05D006046 1.5e-154 550.1 409 70.2
TWI63G0472 Tripterygium wilfordii HOM05D004835 ORTHO05D006046 4.3e-154 548.5 370 75.4
CsaV3_1G011070 Cucumis sativus L. HOM05D004835 ORTHO05D006046 2.8e-153 545.8 413 70.5
Oeu030985.2 Olea europaea HOM05D004835 ORTHO05D006046 4.8e-153 545.0 443 65.9
PSO675G0743 Papaver somniferum HOM05D004835 ORTHO05D006046 4.8e-153 545.0 433 67.2
Sed0001374 Sechium edule HOM05D004835 ORTHO05D006046 1.5e-151 540.0 427 68.1
RcHm_v2.0_Chr5g0004011 Rosa chinensis HOM05D004835 ORTHO05D006046 2.0e-151 539.7 413 69.7
ECA236G4143 Erigeron canadensis HOM05D004835 ORTHO05D006046 3.8e-150 535.4 410 68.5
FAN25G1333 Fragaria x ananassa HOM05D004835 ORTHO05D006046 4.9e-150 535.0 368 73.9
Lsat_1_v5_gn_7_16981 Lactuca sativa HOM05D004835 ORTHO05D006046 6.4e-150 534.6 419 68.7
CANSAT56G3094 Cannabis sativa HOM05D004835 ORTHO05D006046 8.4e-150 534.3 415 68.4
arahy.Tifrunner.gnm1.ann1.P6UBAG Arachis hypogaea HOM05D004835 ORTHO05D006046 3.2e-149 532.3 375 72.0
Duzib235G1297 Durio zibethinus HOM05D004835 ORTHO05D006046 4.2e-149 531.9 375 72.5
arahy.Tifrunner.gnm1.ann1.06HJR7 Arachis hypogaea HOM05D004835 ORTHO05D006046 5.4e-149 531.6 375 71.7
FvH4_3g02680 Fragaria vesca HOM05D004835 ORTHO05D006046 5.4e-149 531.6 371 73.6
AUR62022016 Chenopodium quinoa HOM05D004835 ORTHO05D006046 2.7e-148 529.3 370 74.9
Ah.09g235350 Amaranthus hybridus HOM05D004835 ORTHO05D006046 3.5e-148 528.9 391 69.3
DCAR_008123 Daucus carota HOM05D004835 ORTHO05D006046 3.5e-148 528.9 411 67.6
HanXRQChr05g0130051 Helianthus annuus HOM05D004835 ORTHO05D006046 3.5e-148 528.9 412 68.4
Aqoxy4G01996 Aquilegia oxysepala HOM05D004835 ORTHO05D006046 6.0e-148 528.1 397 70.5
Nitab4.5_0003738g0050 Nicotiana tabacum HOM05D004835 ORTHO05D006046 6.0e-148 528.1 388 69.1
EL10Ac8g19899 Beta vulgaris HOM05D004835 ORTHO05D006046 1.8e-147 526.6 398 68.8
Cpa.g.sc198.3 Carica papaya HOM05D004835 ORTHO05D006046 1.8e-147 526.6 410 65.1
Nitab4.5_0006795g0010 Nicotiana tabacum HOM05D004835 ORTHO05D006046 8.7e-147 524.2 388 68.6
ATR0762G046 Amborella trichopoda HOM05D004835 ORTHO05D006046 3.3e-146 522.3 360 73.3
Lalb_Chr02g0144591 Lupinus albus HOM05D004835 ORTHO05D006046 9.6e-146 520.8 380 70.3
Solyc10g005370.3 Solanum lycopersicum HOM05D004835 ORTHO05D006046 1.3e-145 520.4 396 67.7
Sopen10g001360 Solanum pennellii HOM05D004835 ORTHO05D006046 1.6e-145 520.0 396 67.4
Lj5g0006944 Lotus japonicus HOM05D004835 ORTHO05D006046 2.1e-145 519.6 366 70.5
PSO541G2305 Papaver somniferum HOM05D004835 ORTHO05D006046 3.7e-145 518.8 431 65.7
Sc05g0008870 Simmondsia chinensis HOM05D004835 ORTHO05D006046 8.1e-145 517.7 352 73.3
MSTRG.13160 Avicennia marina HOM05D004835 ORTHO05D006046 1.1e-144 517.3 425 64.9
CDE05G0674 Ceratophyllum demersum HOM05D004835 ORTHO05D006046 1.1e-144 517.3 408 66.2
PGSC0003DMG400011280 Solanum tuberosum HOM05D004835 ORTHO05D006046 4.0e-144 515.4 367 70.3
Hund21377 Selenicereus undatus HOM05D004835 ORTHO05D006046 5.3e-144 515.0 360 72.2
Glyma.10G252300 Glycine max HOM05D004835 ORTHO05D006046 1.2e-143 513.8 388 68.3
Ca_10985_v3 Cicer arietinum L. HOM05D004835 ORTHO05D006046 2.6e-143 512.7 381 69.8
Ca_11005_v3 Cicer arietinum L. HOM05D004835 ORTHO05D006046 2.6e-143 512.7 381 69.8
GSVIVG01012626001 Vitis vinifera HOM05D004835 ORTHO05D006046 2.6e-143 512.7 287 86.8
VMungo0720G3178 Vigna mungo HOM05D004835 ORTHO05D006046 3.4e-143 512.3 394 67.3
Glyma.20G141100 Glycine max HOM05D004835 ORTHO05D006046 5.8e-143 511.5 384 68.8
THA.LOC104812524 Tarenaya hassleriana HOM05D004835 ORTHO05D006046 2.2e-142 509.6 402 67.2
Phvul.007G051900 Phaseolus vulgaris HOM05D004835 ORTHO05D006046 6.4e-142 508.1 384 67.7
Dinv17835 Davidia involucrata HOM05D004835 ORTHO05D006046 7.1e-141 504.6 287 85.4
Psat6g210360 Pisum sativum HOM05D004835 ORTHO05D006046 1.8e-139 500.0 385 67.8
Medtr1g105545 Medicago truncatula HOM05D004835 ORTHO05D006046 1.5e-138 496.9 387 67.2
Migut.H01551 Erythranthe guttata HOM05D004835 ORTHO05D006046 3.3e-138 495.7 427 62.5
unitig_749.g13624 Utricularia gibba HOM05D004835 ORTHO05D006046 1.6e-137 493.4 369 68.8
HPP92_010092 Vanilla planifolia HOM05D004835 ORTHO05D006046 2.8e-137 492.7 367 68.4
Os07g0530600 Oryza sativa ssp. japonica HOM05D004835 ORTHO05D006046 1.8e-136 490.0 366 68.9
SalBow1G4699 Salvia bowleyana HOM05D004835 ORTHO05D006046 4.0e-136 488.8 344 73.3
CAN.G105.1 Capsicum annuum HOM05D004835 ORTHO05D006046 6.9e-136 488.0 396 64.4
unitig_26.g9396 Utricularia gibba HOM05D004835 ORTHO05D006046 3.4e-135 485.7 411 63.3
Zm00001eb106240 Zea mays HOM05D004835 ORTHO05D006046 1.7e-134 483.4 390 64.1
Cc00_g17920 Coffea canephora HOM05D004835 ORTHO05D006046 2.9e-134 482.6 287 81.5
Zm00001eb323140 Zea mays HOM05D004835 ORTHO05D006046 6.5e-134 481.5 373 65.4
Lj2A274G58 Lonicera japonica HOM05D004835 ORTHO05D006046 5.5e-133 478.4 391 65.2
Nn1g03640 Nelumbo nucifera HOM05D004835 ORTHO05D006046 5.5e-133 478.4 383 67.4
AT4G21210 Arabidopsis thaliana HOM05D004835 ORTHO05D006046 3.5e-132 475.7 402 64.7
THA.LOC104821035 Tarenaya hassleriana HOM05D004835 ORTHO05D006046 7.9e-132 474.6 408 61.5
Sp7g19300 Schrenkiella parvula HOM05D004835 ORTHO05D006046 1.0e-131 474.2 401 63.3
SGA_v2.0_scaffold49G18268 Striga asiatica HOM05D004835 ORTHO05D006046 1.0e-131 474.2 422 60.7
Carub.0007s2021 Capsella rubella HOM05D004835 ORTHO05D006046 1.3e-131 473.8 401 62.6
AL7G32900 Arabidopsis lyrata HOM05D004835 ORTHO05D006046 1.8e-131 473.4 410 62.2
ECA248G0073 Erigeron canadensis HOM05D004835 ORTHO05D006046 3.9e-131 472.2 379 65.7
Thhalv10025354m.g Eutrema salsugineum HOM05D004835 ORTHO05D006046 5.1e-131 471.9 402 62.7
Aa31LG6G3230 Aethionema arabicum HOM05D004835 ORTHO05D006046 6.7e-131 471.5 408 62.0
BcaNung03833 Brassica carinata HOM05D004835 ORTHO05D006046 8.7e-131 471.1 394 63.2
Lsat_1_v5_gn_1_125320 Lactuca sativa HOM05D004835 ORTHO05D006046 8.7e-131 471.1 394 65.7
MSTRG.14649 Avicennia marina HOM05D004835 ORTHO05D006046 4.3e-130 468.8 416 58.9
Peaxi162Scf00678g00310 Petunia axillaris HOM05D004835 ORTHO05D006046 2.2e-129 466.5 381 63.8
HanXRQChr01g0002521 Helianthus annuus HOM05D004835 ORTHO05D006046 2.8e-129 466.1 361 66.2
CARHR227800 Cardamine hirsuta HOM05D004835 ORTHO05D006046 3.7e-129 465.7 400 62.2
BolC1t01464H Brassica oleracea HOM05D004835 ORTHO05D006046 4.8e-129 465.3 399 63.4
C01p15150 Brassica napus HOM05D004835 ORTHO05D006046 1.1e-128 464.2 399 63.4
BraA01t01201Z Brassica rapa HOM05D004835 ORTHO05D006046 1.8e-128 463.4 405 62.7
BcaC09g51244 Brassica carinata HOM05D004835 ORTHO05D006046 9.0e-128 461.1 399 63.2
A01p12580 Brassica napus HOM05D004835 ORTHO05D006046 2.0e-127 459.9 407 61.2
Cpa.g.sc198.4 Carica papaya HOM05D004835 ORTHO05D006046 1.8e-123 446.8 287 78.0
Sp3g00900 Schrenkiella parvula HOM05D004835 ORTHO05D006046 3.0e-123 446.0 384 60.7
Hund23515 Selenicereus undatus HOM05D004835 ORTHO05D006046 2.0e-122 443.4 363 64.5
HPP92_010083 Vanilla planifolia HOM05D004835 ORTHO05D006046 2.0e-122 443.4 484 51.9
Carub.0003s0094 Capsella rubella HOM05D004835 ORTHO05D006046 7.4e-122 441.4 373 61.4
AL3G11040 Arabidopsis lyrata HOM05D004835 ORTHO05D006046 1.4e-120 437.2 375 62.7
Thhalv10020923m.g Eutrema salsugineum HOM05D004835 ORTHO05D006046 1.5e-119 433.7 382 61.8
AT3G01200 Arabidopsis thaliana HOM05D004835 ORTHO05D006046 7.7e-119 431.4 384 60.7
CARHR075840 Cardamine hirsuta HOM05D004835 ORTHO05D006046 1.0e-118 431.0 352 62.2
BraA01t04644Z Brassica rapa HOM05D004835 ORTHO05D006046 1.7e-118 430.3 385 61.0
BNapus_Darmor_BZH_scaffold_97p00190 Brassica napus HOM05D004835 ORTHO05D006046 2.2e-118 429.9 382 61.0
BNapus_Darmor_BZH_scaffold_113p00010 Brassica napus HOM05D004835 ORTHO05D006046 2.9e-118 429.5 382 61.0
BolC1t05939H Brassica oleracea HOM05D004835 ORTHO05D006046 6.5e-118 428.3 378 61.1
CSS0001434 Camellia sinensis var. sinensis HOM05D004835 ORTHO05D006046 1.4e-117 427.2 322 68.3
BcaC09g47670 Brassica carinata HOM05D004835 ORTHO05D006046 1.2e-116 424.1 362 62.2
Pp3c11_19190 Physcomitrium patens HOM05D004835 ORTHO05D006046 1.6e-116 423.7 364 56.6
Mapoly0141s0024 Marchantia polymorpha HOM05D004835 ORTHO05D006046 2.1e-116 423.3 366 59.3
BcaC05g30485 Brassica carinata HOM05D004835 ORTHO05D006046 3.0e-115 419.5 387 59.4
SEGI_26962 Sequoiadendron giganteum HOM05D004835 ORTHO05D006046 2.6e-114 416.4 388 56.7
SMO147G0180 Selaginella moellendorffii HOM05D004835 ORTHO05D006046 9.7e-114 414.5 290 64.1
C09p75340 Brassica napus HOM05D004835 ORTHO05D006046 2.2e-113 413.3 383 59.5
BolC5t35125H Brassica oleracea HOM05D004835 ORTHO05D006046 2.2e-113 413.3 383 59.5
A05p44760 Brassica napus HOM05D004835 ORTHO05D006046 1.8e-112 410.2 392 57.7
BraA05t23181Z Brassica rapa HOM05D004835 ORTHO05D006046 1.8e-112 410.2 392 57.7
BcaB04g21426 Brassica carinata HOM05D004835 ORTHO05D006046 4.1e-112 409.1 378 59.5
BcaC05g30395 Brassica carinata HOM05D004835 ORTHO05D006046 4.1e-112 409.1 383 59.0
FAN21G1397 Fragaria x ananassa HOM05D004835 ORTHO05D006046 2.9e-110 402.9 287 73.2
TPR.G5518 Trifolium pratense HOM05D004835 ORTHO05D006046 2.6e-106 389.8 367 59.1
AagrBONN_evm.TU.Sc2ySwM_368.2632 Anthoceros agrestis HOM05D004835 ORTHO05D006046 8.0e-100 368.2 339 55.5
CBR_g38977 Chara braunii HOM05D004835 ORTHO05D006046 3.4e-98 362.8 421 48.2
Aa31LG5G12420 Aethionema arabicum HOM05D004835 ORTHO05D006046 1.4e-91 340.9 251 68.1
Dinv20014 Davidia involucrata HOM05D004835 ORTHO05D006046 5.4e-88 328.9 193 80.3
Cre12.g514600 Chlamydomonas reinhardtii HOM05D004835 ORTHO05D006046 4.3e-61 239.6 310 41.6
MCO14G521 Micromonas commoda HOM05D004835 ORTHO05D006046 3.7e-57 226.5 289 42.6
BolC1t05935H Brassica oleracea HOM05D004835 ORTHO05D006046 3.5e-55 219.9 171 64.9
BNapus_Darmor_BZH_scaffold_97p00140 Brassica napus HOM05D004835 ORTHO05D006046 2.5e-53 213.8 160 66.9
TPR.G4570 Trifolium pratense HOM05D004835 ORTHO05D006046 4.4e-50 203.0 258 47.3
MD10G1314400 Malus domestica HOM05D004835 ORTHO05D006046 2.0e-42 177.6 248 46.8
BolC1t05929H Brassica oleracea HOM05D004835 ORTHO05D006046 2.4e-32 144.1 189 45.0
Actinidia05534 Actinidia chinensis HOM05D000018 ORTHO05D001766 7.4e-29 132.5 106 63.2
Dinv20013 Davidia involucrata HOM05D004835 ORTHO05D006046 2.6e-26 124.0 72 81.9
Aa31LG5G12410 Aethionema arabicum HOM05D004835 ORTHO05D038187 1.2e-23 115.2 132 53.0
CANSAT64G1413 Cannabis sativa HOM05D004835 ORTHO05D006046 2.1e-23 114.4 176 40.9
Ca_29404_v3 Cicer arietinum L. HOM05D004835 ORTHO05D148401 2.1e-20 104.4 283 28.3
QL10p027838 Quercus lobata HOM05D004835 ORTHO05D337120 8.2e-20 102.4 110 50.0
BolC5t35131H Brassica oleracea HOM05D004835 ORTHO05D038187 1.3e-14 85.1 56 69.6


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