Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G1079 Trochodendron aralioides HOM05D000891 ORTHO05D000761 1.0e-60 237.3 197 100.0
TAR629G1624 Trochodendron aralioides HOM05D000891 ORTHO05D000761 9.0e-49 197.6 197 88.8
CSS0040738 Camellia sinensis var. sinensis HOM05D000891 ORTHO05D000761 4.3e-43 178.7 199 66.3
CSS0036990 Camellia sinensis var. sinensis HOM05D000891 ORTHO05D000761 3.0e-36 156.0 199 62.3
CsaV3_1G010890 Cucumis sativus L. HOM05D000891 ORTHO05D000761 3.3e-35 152.5 197 72.6
TWI38G0441 Tripterygium wilfordii HOM05D000891 ORTHO05D000761 3.3e-35 152.5 197 76.1
TWI63G1417 Tripterygium wilfordii HOM05D000891 ORTHO05D000761 3.7e-34 149.1 198 77.8
Hma1.2p1_0813F.1_g222620 Hydrangea macrophylla HOM05D000891 ORTHO05D000761 1.2e-32 144.1 197 76.1
Haze_06789 Corylus avellana HOM05D000891 ORTHO05D000761 2.0e-32 143.3 197 75.6
Psat1g181920 Pisum sativum HOM05D000891 ORTHO05D000761 2.9e-31 139.4 197 62.9
CARHR011930 Cardamine hirsuta HOM05D000891 ORTHO05D000761 7.9e-29 131.3 194 66.0
Ca_00621_v3 Cicer arietinum L. HOM05D000891 ORTHO05D000761 2.3e-28 129.8 197 64.0
Potri.004G018000 Populus trichocarpa HOM05D000891 ORTHO05D000761 3.0e-28 129.4 198 67.7
Sabra11G0000300 Salix brachista HOM05D000891 ORTHO05D000761 3.0e-28 129.4 198 55.1
ClCG03G004860 Citrullus lanatus HOM05D000891 ORTHO05D000761 8.8e-28 127.9 196 73.5
Medtr2g022860 Medicago truncatula HOM05D000891 ORTHO05D000761 2.5e-27 126.3 196 53.6
TPR.G7638 Trifolium pratense HOM05D000891 ORTHO05D000761 9.7e-27 124.4 195 56.4
CDE12G0148 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 2.2e-26 123.2 190 39.5
Cfa000246 Carpinus fangiana HOM05D000891 ORTHO05D000761 6.3e-26 121.7 197 71.1
Sabra04G0009800 Salix brachista HOM05D000891 ORTHO05D000761 5.3e-25 118.6 198 65.7
Cc09_g01890 Coffea canephora HOM05D000891 ORTHO05D000761 6.9e-25 118.2 198 61.1
arahy.Tifrunner.gnm1.ann1.13GHM6 Arachis hypogaea HOM05D000891 ORTHO05D000761 3.4e-24 115.9 83 65.1
arahy.Tifrunner.gnm1.ann1.305IG9 Arachis hypogaea HOM05D000891 ORTHO05D000761 3.4e-24 115.9 83 65.1
BolC5t29717H Brassica oleracea HOM05D000891 ORTHO05D000761 4.5e-24 115.5 197 58.9
C05p09760 Brassica napus HOM05D000891 ORTHO05D000761 2.2e-23 113.2 197 58.4
BcaC05g25031 Brassica carinata HOM05D000891 ORTHO05D000761 1.4e-22 110.5 197 57.9
C04p27830 Brassica napus HOM05D000891 ORTHO05D026225 1.4e-22 110.5 197 36.5
BolC4t24326H Brassica oleracea HOM05D000891 ORTHO05D026225 1.4e-22 110.5 197 36.5
Lalb_Chr15g0087451 Lupinus albus HOM05D000891 ORTHO05D000761 2.1e-21 106.7 83 61.4
Potri.011G001100 Populus trichocarpa HOM05D000891 ORTHO05D000761 6.1e-21 105.1 198 57.6
Phvul.006G150800 Phaseolus vulgaris HOM05D000891 ORTHO05D000761 1.8e-20 103.6 83 57.8
AL1G22760 Arabidopsis lyrata HOM05D000891 ORTHO05D000761 3.9e-20 102.4 197 57.9
Eucgr.L02057 Eucalyptus grandis HOM05D000891 ORTHO05D000761 5.1e-20 102.1 182 65.4
VMungo0540G1743 Vigna mungo HOM05D000891 ORTHO05D000761 1.5e-19 100.5 83 57.8
HPP92_005858 Vanilla planifolia HOM05D000891 ORTHO05D026715 7.4e-19 98.2 197 58.9
BcaC06g31872 Brassica carinata HOM05D000891 ORTHO05D000761 9.7e-19 97.8 190 67.9
Lalb_Chr18g0056251 Lupinus albus HOM05D000891 ORTHO05D000761 1.3e-18 97.4 82 62.2
Sc05g0009060 Simmondsia chinensis HOM05D000891 ORTHO05D000761 6.3e-18 95.1 197 62.4
MBI02_g28331_MAGBIO Magnolia biondii HOM05D000891 ORTHO05D000761 3.1e-17 92.8 196 63.8
CDE02G2552 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 2.9e-15 86.3 194 30.4
SalBow8G1993 Salvia bowleyana HOM05D000891 ORTHO05D000761 1.5e-14 84.0 196 27.6
HPP92_005910 Vanilla planifolia HOM05D000891 ORTHO05D000761 5.5e-14 82.0 181 68.5
Lj6g0026353 Lotus japonicus HOM05D000891 ORTHO05D000761 1.6e-13 80.5 160 70.6
BcaC02g10532 Brassica carinata HOM05D000134 ORTHO05D026225 8.0e-13 78.2 172 33.7
Thhalv10007792m.g Eutrema salsugineum HOM05D000891 ORTHO05D000761 1.4e-12 77.4 194 55.7
Sed0018063 Sechium edule HOM05D000891 ORTHO05D000761 1.4e-12 77.4 197 54.3
EL10Ac8g20024 Beta vulgaris HOM05D000891 ORTHO05D000761 3.0e-12 76.3 48 75.0
PSO063G4130 Papaver somniferum HOM05D000891 ORTHO05D000761 3.0e-12 76.3 48 72.9
Nn1g07110 Nelumbo nucifera HOM05D000891 ORTHO05D000761 2.0e-11 73.6 48 72.9
Aqoxy1G03290 Aquilegia oxysepala HOM05D000891 ORTHO05D000761 3.3e-11 72.8 48 70.8
Lj1P1228T67 Lonicera japonica HOM05D000891 ORTHO05D000761 3.3e-11 72.8 48 72.9
Peaxi162Scf00203g00126 Petunia axillaris HOM05D000891 ORTHO05D000761 4.4e-11 72.4 45 68.9
Hund23485 Selenicereus undatus HOM05D000891 ORTHO05D000761 5.7e-11 72.0 48 68.8
AT1G11630 Arabidopsis thaliana HOM05D000891 ORTHO05D000761 9.7e-11 71.2 194 50.5
Dinv13875 Davidia involucrata HOM05D000891 ORTHO05D000761 1.7e-10 70.5 48 70.8
Ah.14g088070 Amaranthus hybridus HOM05D000891 ORTHO05D000761 2.8e-10 69.7 47 70.2
Nitab4.5_0002155g0070 Nicotiana tabacum HOM05D000891 ORTHO05D000761 6.3e-10 68.6 48 62.5
Nitab4.5_0007448g0010 Nicotiana tabacum HOM05D000891 ORTHO05D000761 8.2e-10 68.2 48 62.5
AUR62021977 Chenopodium quinoa HOM05D000891 ORTHO05D000761 1.1e-09 67.8 48 66.7
MBI02_g28329_MAGBIO Magnolia biondii HOM05D000891 ORTHO05D000761 1.1e-09 67.8 48 66.7
Aqoxy4G01242 Aquilegia oxysepala HOM05D058852 ORTHO05D026715 1.4e-09 67.4 77 40.3
Medtr6g047970 Medicago truncatula HOM05D000891 ORTHO05D000761 1.4e-09 67.4 179 26.3
Actinidia26936 Actinidia chinensis HOM05D000891 ORTHO05D000761 1.8e-09 67.0 48 68.8
Aqoxy7G02438 Aquilegia oxysepala HOM05D058852 ORTHO05D026715 1.8e-09 67.0 82 37.8
Atru.chr10.2185 Acer truncatum HOM05D000891 ORTHO05D026225 2.4e-09 66.6 36 86.1
Oeu033890.1 Olea europaea HOM05D000891 ORTHO05D000761 2.4e-09 66.6 47 63.8
Thecc.01G038900 Theobroma cacao HOM05D000891 ORTHO05D000761 2.4e-09 66.6 195 43.1
Thecc.06G217800 Theobroma cacao HOM05D000891 ORTHO05D000761 3.1e-09 66.2 48 64.6
GSVIVG01004801001 Vitis vinifera HOM05D000891 ORTHO05D000761 3.1e-09 66.2 47 68.1
AUR62012679 Chenopodium quinoa HOM05D000891 ORTHO05D000761 4.1e-09 65.9 48 64.6
Gohir.A09G069200 Gossypium hirsutum HOM05D000891 ORTHO05D000761 5.3e-09 65.5 48 66.7
Gohir.D10G013900 Gossypium hirsutum HOM05D000891 ORTHO05D000761 7.0e-09 65.1 45 64.4
Gorai.011G015700 Gossypium raimondii HOM05D000891 ORTHO05D000761 7.0e-09 65.1 45 64.4
MSTRG.14642 Avicennia marina HOM05D000891 ORTHO05D000761 9.1e-09 64.7 47 61.7
A06p08200 Brassica napus HOM05D000891 ORTHO05D000761 9.1e-09 64.7 197 49.7
BraA06t24020Z Brassica rapa HOM05D000891 ORTHO05D000761 9.1e-09 64.7 197 49.7
MD10G1318400 Malus domestica HOM05D000891 ORTHO05D000761 9.1e-09 64.7 48 64.6
PGR042G1315 Punica granatum HOM05D000891 ORTHO05D000761 9.1e-09 64.7 47 66.0
Sopen10g001270 Solanum pennellii HOM05D000891 ORTHO05D000761 9.1e-09 64.7 48 60.4
PGSC0003DMG400011285 Solanum tuberosum HOM05D000891 ORTHO05D000761 9.1e-09 64.7 48 60.4
MD05G1343300 Malus domestica HOM05D000891 ORTHO05D000761 1.2e-08 64.3 48 66.7
THA.LOC104809510 Tarenaya hassleriana HOM05D000891 ORTHO05D000761 1.2e-08 64.3 48 60.4
Cpa.g.sc198.30 Carica papaya HOM05D000891 ORTHO05D000761 1.6e-08 63.9 48 62.5
CAN.G105.16 Capsicum annuum HOM05D000891 ORTHO05D000761 2.0e-08 63.5 45 60.0
Ciclev10015461m.g Citrus clementina HOM05D000891 ORTHO05D000761 2.0e-08 63.5 45 64.4
Gohir.D09G069100 Gossypium hirsutum HOM05D000891 ORTHO05D000761 2.6e-08 63.2 47 66.0
Gorai.006G083300 Gossypium raimondii HOM05D000891 ORTHO05D000761 2.6e-08 63.2 47 66.0
Solyc10g005280.1 Solanum lycopersicum HOM05D000891 ORTHO05D000761 2.6e-08 63.2 48 58.3
Duzib235G0743 Durio zibethinus HOM05D000891 ORTHO05D000761 3.5e-08 62.8 48 62.5
Lsat_1_v5_gn_4_142760 Lactuca sativa HOM05D003771 ORTHO05D012343 3.5e-08 62.8 64 48.4
Prupe.4G023500 Prunus persica HOM05D000891 ORTHO05D000761 3.5e-08 62.8 48 62.5
Thhalv10023498m.g Eutrema salsugineum HOM05D000891 ORTHO05D000761 4.5e-08 62.4 48 58.3
Gorai.004G069000 Gossypium raimondii HOM05D000891 ORTHO05D000761 4.5e-08 62.4 45 62.2
ATR0752G205 Amborella trichopoda HOM05D000891 ORTHO05D000761 5.9e-08 62.0 47 55.3
Manes.16G009800 Manihot esculenta HOM05D000891 ORTHO05D000761 5.9e-08 62.0 46 63.0
SGA_v2.0_scaffold89G27459 Striga asiatica HOM05D000891 ORTHO05D000761 5.9e-08 62.0 48 58.3
AL2G14180 Arabidopsis lyrata HOM05D000891 ORTHO05D000761 7.7e-08 61.6 45 60.0
COL.COLO4_22110 Corchorus olitorius HOM05D000891 ORTHO05D000761 7.7e-08 61.6 195 36.4
HanXRQChr05g0129621 Helianthus annuus HOM05D000891 ORTHO05D000761 7.7e-08 61.6 45 64.4
Lsat_1_v5_gn_4_60040 Lactuca sativa HOM05D000891 ORTHO05D000761 7.7e-08 61.6 42 64.3
RcHm_v2.0_Chr5g0003601 Rosa chinensis HOM05D000891 ORTHO05D000761 7.7e-08 61.6 48 62.5
HPP92_018469 Vanilla planifolia HOM05D000891 ORTHO05D000761 1.0e-07 61.2 45 57.8
Atru.chr3.547 Acer truncatum HOM05D000891 ORTHO05D000761 1.3e-07 60.8 195 30.3
Ciclev10015479m.g Citrus clementina HOM05D000891 ORTHO05D000761 1.3e-07 60.8 47 59.6
CsaV3_3G041130 Cucumis sativus L. HOM05D000891 ORTHO05D011021 1.3e-07 60.8 189 25.4
RcHm_v2.0_Chr4g0403291 Rosa chinensis HOM05D000891 ORTHO05D000761 1.7e-07 60.5 197 41.1
MSTRG.7228 Avicennia marina HOM05D000891 ORTHO05D000761 2.2e-07 60.1 47 57.4
Cpa.g.sc353.5 Carica papaya HOM05D000891 ORTHO05D000761 2.2e-07 60.1 196 41.8
Hund21396 Selenicereus undatus HOM05D000891 ORTHO05D000761 2.9e-07 59.7 46 60.9
CARHR050450 Cardamine hirsuta HOM05D000891 ORTHO05D000761 3.8e-07 59.3 45 55.6
DCAR_004206 Daucus carota HOM05D000891 ORTHO05D000761 5.0e-07 58.9 44 63.6
Eucgr.L02848 Eucalyptus grandis HOM05D000891 ORTHO05D000761 5.0e-07 58.9 45 60.0
Sp1g10240 Schrenkiella parvula HOM05D000891 ORTHO05D000761 5.0e-07 58.9 48 56.2
BcaC04g22358 Brassica carinata HOM05D000891 ORTHO05D000761 6.5e-07 58.5 45 57.8
MD15G1265700 Malus domestica HOM05D000891 ORTHO05D000761 6.5e-07 58.5 195 23.1
CiPaw.01G035200 Carya illinoinensis HOM05D000891 ORTHO05D000761 8.5e-07 58.2 196 25.0
CANSAT56G0821 Cannabis sativa HOM05D000891 ORTHO05D000761 1.1e-06 57.8 48 58.3
Migut.H01561 Erythranthe guttata HOM05D000891 ORTHO05D000761 1.1e-06 57.8 47 55.3
Eucgr.E04085 Eucalyptus grandis HOM05D000891 ORTHO05D000761 1.1e-06 57.8 48 54.2
FvH4_3g02370 Fragaria vesca HOM05D000891 ORTHO05D000761 1.1e-06 57.8 48 58.3
FAN25G3562 Fragaria x ananassa HOM05D000891 ORTHO05D000761 1.1e-06 57.8 48 58.3
ClCG07G009040 Citrullus lanatus HOM05D000891 ORTHO05D000761 1.5e-06 57.4 195 39.5
Dinv26815 Davidia involucrata HOM05D000891 ORTHO05D000761 1.5e-06 57.4 195 39.0
Migut.H01563 Erythranthe guttata HOM05D000891 ORTHO05D000761 1.5e-06 57.4 44 56.8
TWI53G1937 Tripterygium wilfordii HOM05D000891 ORTHO05D000761 1.5e-06 57.4 195 38.5
Aa31LG2G8960 Aethionema arabicum HOM05D000891 ORTHO05D000761 1.9e-06 57.0 48 52.1
Haze_15114 Corylus avellana HOM05D000891 ORTHO05D000761 1.9e-06 57.0 193 22.8
MD02G1151200 Malus domestica HOM05D000891 ORTHO05D000761 1.9e-06 57.0 195 36.4
Prupe.7G151800 Prunus persica HOM05D000891 ORTHO05D000761 2.5e-06 56.6 195 23.1
CAN.G358.118 Capsicum annuum HOM05D000891 ORTHO05D000761 3.2e-06 56.2 195 22.6
COL.COLO4_31729 Corchorus olitorius HOM05D000891 ORTHO05D000761 4.2e-06 55.8 45 55.6
COL.COLO4_31747 Corchorus olitorius HOM05D000891 ORTHO05D000761 4.2e-06 55.8 45 55.6
Gohir.D12G065400 Gossypium hirsutum HOM05D000891 ORTHO05D000761 4.2e-06 55.8 195 39.5
Gorai.008G068700 Gossypium raimondii HOM05D000891 ORTHO05D000761 4.2e-06 55.8 195 39.5
Ca_09841_v3 Cicer arietinum L. HOM05D007340 ORTHO05D008979 5.5e-06 55.5 78 38.5
COL.COLO4_17527 Corchorus olitorius HOM05D000891 ORTHO05D008746 5.5e-06 55.5 77 36.4
Nitab4.5_0013032g0040 Nicotiana tabacum HOM05D000891 ORTHO05D000761 5.5e-06 55.5 195 41.5
RcHm_v2.0_Chr7g0232061 Rosa chinensis HOM05D007884 ORTHO05D009968 5.5e-06 55.5 57 45.6
Nitab4.5_0000310g0140 Nicotiana tabacum HOM05D000891 ORTHO05D000761 7.2e-06 55.1 195 41.5
Rhsim13G0156100 Rhododendron simsii HOM05D000891 ORTHO05D000761 7.2e-06 55.1 36 69.4
Carub.0001s1127 Capsella rubella HOM05D000891 ORTHO05D000761 9.4e-06 54.7 45 51.1
CARHR074340 Cardamine hirsuta HOM05D000891 ORTHO05D000761 9.4e-06 54.7 82 31.7
SGA_v2.0_scaffold7G03868 Striga asiatica HOM05D000891 ORTHO05D000761 9.4e-06 54.7 156 64.7


User provided reference genes

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