Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0989 Trochodendron aralioides HOM05D004805 ORTHO05D005756 1.2e-214 749.6 371 100.0
Nn1g07520 Nelumbo nucifera HOM05D004805 ORTHO05D005756 8.0e-115 417.9 248 82.7
Dinv10336 Davidia involucrata HOM05D004805 ORTHO05D005756 1.8e-111 406.8 250 78.0
Cfa020188 Carpinus fangiana HOM05D004805 ORTHO05D005756 4.5e-110 402.1 246 77.2
Haze_09828 Corylus avellana HOM05D004805 ORTHO05D005756 7.2e-108 394.8 244 76.2
CSS0002120 Camellia sinensis var. sinensis HOM05D004805 ORTHO05D005756 1.6e-107 393.7 249 77.1
Lalb_Chr09g0322761 Lupinus albus HOM05D004805 ORTHO05D005756 4.7e-107 392.1 249 74.3
TPR.G8592 Trifolium pratense HOM05D004805 ORTHO05D005756 8.0e-107 391.3 248 74.2
Glyma.17G150300 Glycine max HOM05D004805 ORTHO05D005756 1.0e-106 391.0 244 75.0
Atru.chr13.2016 Acer truncatum HOM05D004805 ORTHO05D005756 3.0e-106 389.4 251 73.7
Glyma.14G013400 Glycine max HOM05D004805 ORTHO05D005756 4.0e-106 389.0 245 74.3
Phvul.008G279200 Phaseolus vulgaris HOM05D004805 ORTHO05D005756 4.4e-105 385.6 249 72.3
Psat2g007280 Pisum sativum HOM05D004805 ORTHO05D005756 4.4e-105 385.6 248 72.2
CiPaw.12G138400 Carya illinoinensis HOM05D004805 ORTHO05D005756 9.8e-105 384.4 244 75.0
Aqoxy4G03118 Aquilegia oxysepala HOM05D004805 ORTHO05D005756 1.7e-104 383.6 249 76.3
Medtr5g095960 Medicago truncatula HOM05D004805 ORTHO05D005756 1.7e-104 383.6 248 72.2
Lj1g0004670 Lotus japonicus HOM05D004805 ORTHO05D005756 4.9e-104 382.1 248 71.8
GSVIVG01014691001 Vitis vinifera HOM05D004805 ORTHO05D005756 4.9e-104 382.1 249 75.5
Ca_06397_v3 Cicer arietinum L. HOM05D004805 ORTHO05D005756 8.3e-104 381.3 248 71.4
LjContig00081g0004731 Lotus japonicus HOM05D004805 ORTHO05D005756 2.4e-103 379.8 248 73.0
Atru.chr9.1539 Acer truncatum HOM05D004805 ORTHO05D005756 3.1e-103 379.4 246 74.8
Duzib268G0855 Durio zibethinus HOM05D004805 ORTHO05D005756 7.0e-103 378.3 248 73.4
Ciclev10009329m.g Citrus clementina HOM05D004805 ORTHO05D005756 1.2e-102 377.5 249 73.5
Actinidia30402 Actinidia chinensis HOM05D004805 ORTHO05D005756 3.5e-102 375.9 246 75.2
Lj1C890G11 Lonicera japonica HOM05D004805 ORTHO05D005756 4.5e-102 375.6 243 75.7
Prupe.3G149500 Prunus persica HOM05D004805 ORTHO05D005756 7.7e-102 374.8 248 73.8
RcHm_v2.0_Chr5g0018651 Rosa chinensis HOM05D004805 ORTHO05D005756 7.7e-102 374.8 248 73.4
arahy.Tifrunner.gnm1.ann1.KL44N8 Arachis hypogaea HOM05D004805 ORTHO05D005756 1.0e-101 374.4 248 71.8
Gorai.004G033700 Gossypium raimondii HOM05D004805 ORTHO05D005756 1.7e-101 373.6 248 72.6
FAN16G0962 Fragaria x ananassa HOM05D004805 ORTHO05D005756 2.3e-101 373.2 254 70.5
RcHm_v2.0_Chr7g0241681 Rosa chinensis HOM05D004805 ORTHO05D005756 3.8e-101 372.5 249 72.7
FvH4_3g11630 Fragaria vesca HOM05D004805 ORTHO05D005756 5.0e-101 372.1 248 71.8
arahy.Tifrunner.gnm1.ann1.1A96RS Arachis hypogaea HOM05D004805 ORTHO05D005756 6.6e-101 371.7 248 72.2
FAN25G0449 Fragaria x ananassa HOM05D004805 ORTHO05D005756 6.6e-101 371.7 254 70.5
MD05G1261800 Malus domestica HOM05D004805 ORTHO05D005756 6.6e-101 371.7 248 73.0
CsaV3_3G004240 Cucumis sativus L. HOM05D004805 ORTHO05D005756 1.5e-100 370.5 244 70.1
ClCG10G004450 Citrullus lanatus HOM05D004805 ORTHO05D005756 2.8e-99 366.3 244 70.9
Rhsim06G0229900 Rhododendron simsii HOM05D004805 ORTHO05D005756 1.4e-98 364.0 250 72.4
PSO832G0973 Papaver somniferum HOM05D004805 ORTHO05D005756 2.3e-98 363.2 244 70.5
Actinidia05003 Actinidia chinensis HOM05D004805 ORTHO05D005756 6.8e-98 361.7 247 72.9
Eucgr.F03688 Eucalyptus grandis HOM05D004805 ORTHO05D005756 1.5e-97 360.5 248 71.0
Sed0016007 Sechium edule HOM05D004805 ORTHO05D005756 1.5e-97 360.5 251 68.1
PSO063G7513 Papaver somniferum HOM05D004805 ORTHO05D005756 7.5e-97 358.2 246 69.1
THA.LOC104811668 Tarenaya hassleriana HOM05D004805 ORTHO05D005756 9.8e-97 357.8 244 70.1
Lsat_1_v5_gn_9_89740 Lactuca sativa HOM05D004805 ORTHO05D005756 1.3e-96 357.5 243 70.4
MELO3C014119.2 Cucumis melo HOM05D004805 ORTHO05D005756 4.9e-96 355.5 282 62.4
SGA_v2.0_scaffold44G16806 Striga asiatica HOM05D001081 ORTHO05D003320 3.2e-95 352.8 245 69.0
ECA234G3028 Erigeron canadensis HOM05D004805 ORTHO05D005756 5.4e-95 352.1 244 69.7
MSTRG.27026 Avicennia marina HOM05D004805 ORTHO05D005756 7.0e-95 351.7 246 67.1
Cc00_g18290 Coffea canephora HOM05D004805 ORTHO05D005756 1.2e-94 350.9 239 69.5
PGR142G3095 Punica granatum HOM05D004805 ORTHO05D005756 1.2e-94 350.9 248 69.0
CANSAT11G2385 Cannabis sativa HOM05D004805 ORTHO05D005756 2.7e-94 349.7 247 69.2
Peaxi162Scf00139g01316 Petunia axillaris HOM05D004805 ORTHO05D005756 2.3e-93 346.7 242 69.0
DCAR_013232 Daucus carota HOM05D004805 ORTHO05D005756 3.0e-93 346.3 246 68.3
SalBow4G0417 Salvia bowleyana HOM05D004805 ORTHO05D005756 5.0e-93 345.5 267 63.3
HanXRQChr03g0074031 Helianthus annuus HOM05D004805 ORTHO05D005756 1.9e-92 343.6 237 69.6
HPP92_025829 Vanilla planifolia HOM05D004805 ORTHO05D005756 3.3e-92 342.8 244 66.8
Aa31LG3G11710 Aethionema arabicum HOM05D004805 ORTHO05D005756 9.5e-92 341.3 243 66.3
ATR0090G032 Amborella trichopoda HOM05D004805 ORTHO05D005756 1.2e-91 340.9 218 77.5
Manes.03G141600 Manihot esculenta HOM05D004805 ORTHO05D005756 2.8e-91 339.7 248 66.5
Sopen07g033800 Solanum pennellii HOM05D004805 ORTHO05D005756 6.2e-91 338.6 242 67.8
CAN.G623.13 Capsicum annuum HOM05D004805 ORTHO05D005756 1.4e-90 337.4 246 66.7
Gohir.D08G035700 Gossypium hirsutum HOM05D004805 ORTHO05D005756 5.2e-90 335.5 248 67.3
Solyc07g065590.4 Solanum lycopersicum HOM05D004805 ORTHO05D005756 5.2e-90 335.5 265 63.0
Gohir.A08G025200 Gossypium hirsutum HOM05D004805 ORTHO05D005756 8.9e-90 334.7 248 66.9
AL8G31370 Arabidopsis lyrata HOM05D004805 ORTHO05D005756 2.6e-89 333.2 243 66.7
AT5G55810 Arabidopsis thaliana HOM05D004805 ORTHO05D005756 2.6e-89 333.2 243 65.4
Duzib213G0036 Durio zibethinus HOM05D004805 ORTHO05D005756 3.4e-89 332.8 244 67.2
Carub.0008s1616 Capsella rubella HOM05D004805 ORTHO05D005756 7.5e-89 331.6 243 65.0
EL10Ac1g00341 Beta vulgaris HOM05D004805 ORTHO05D005756 2.2e-88 330.1 251 64.9
BcaC01g06393 Brassica carinata HOM05D004805 ORTHO05D005756 2.2e-88 330.1 243 65.0
Hma1.2p1_1402F.1_g281100 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 6.4e-88 328.6 216 73.1
Potri.013G021900 Populus trichocarpa HOM05D004805 ORTHO05D005756 6.4e-88 328.6 244 65.2
BcaB01g04372 Brassica carinata HOM05D004805 ORTHO05D005756 1.9e-87 327.0 243 65.0
QL08p004083 Quercus lobata HOM05D004805 ORTHO05D005756 3.2e-87 326.2 205 75.6
CARHR269130 Cardamine hirsuta HOM05D004805 ORTHO05D005756 5.4e-87 325.5 243 64.2
TWI38G2348 Tripterygium wilfordii HOM05D004805 ORTHO05D005756 5.4e-87 325.5 204 75.5
Sabra05G0034900 Salix brachista HOM05D004805 ORTHO05D005756 7.0e-87 325.1 249 63.5
Potri.005G032300 Populus trichocarpa HOM05D004805 ORTHO05D005756 9.2e-87 324.7 248 63.7
Carub.0005s0950 Capsella rubella HOM05D004805 ORTHO05D005756 2.0e-86 323.6 242 64.5
BcaC04g20199 Brassica carinata HOM05D004805 ORTHO05D005756 3.5e-86 322.8 243 63.4
Carub.0005s0937 Capsella rubella HOM05D004805 ORTHO05D005756 4.6e-86 322.4 242 64.0
PGSC0003DMG400022170 Solanum tuberosum HOM05D004805 ORTHO05D005756 6.0e-86 322.0 218 70.2
Sp6g17690 Schrenkiella parvula HOM05D004805 ORTHO05D005756 3.9e-85 319.3 243 62.6
BcaB08g35939 Brassica carinata HOM05D004805 ORTHO05D005756 6.6e-85 318.5 249 62.2
MD10G1240100 Malus domestica HOM05D004805 ORTHO05D005756 2.5e-84 316.6 204 74.5
VMungo0647G2576 Vigna mungo HOM05D004805 ORTHO05D005756 9.5e-84 314.7 198 74.2
Zm00001eb191530 Zea mays HOM05D004805 ORTHO05D005756 2.1e-83 313.5 246 62.6
Hund27237 Selenicereus undatus HOM05D004805 ORTHO05D005756 8.1e-83 311.6 277 59.6
Sc16g0008090 Simmondsia chinensis HOM05D004805 ORTHO05D005756 1.4e-82 310.8 244 63.9
vmacro11591 Vaccinium macrocarpon HOM05D004805 ORTHO05D005756 2.3e-82 310.1 261 62.5
Medtr3g007850 Medicago truncatula HOM05D004805 ORTHO05D005756 8.9e-82 308.1 196 71.9
AUR62022629 Chenopodium quinoa HOM05D004805 ORTHO05D005756 2.4e-79 300.1 244 63.9
C03p16250 Brassica napus HOM05D004805 ORTHO05D005756 1.0e-77 294.7 216 64.4
A03p13810 Brassica napus HOM05D004805 ORTHO05D005756 1.3e-77 294.3 216 63.4
TAR624G1110 Trochodendron aralioides HOM05D004805 ORTHO05D005756 1.7e-77 293.9 197 76.6
Nitab4.5_0002736g0040 Nicotiana tabacum HOM05D004805 ORTHO05D005756 1.5e-76 290.8 192 71.4
Mapoly0011s0011 Marchantia polymorpha HOM05D004805 ORTHO05D005756 4.3e-76 289.3 254 58.7
C09p46750 Brassica napus HOM05D004805 ORTHO05D005756 4.0e-74 282.7 217 62.2
BolC9t57526H Brassica oleracea HOM05D004805 ORTHO05D005756 4.0e-74 282.7 217 62.2
A10p13030 Brassica napus HOM05D004805 ORTHO05D005756 6.8e-74 282.0 217 62.7
Nitab4.5_0007415g0050 Nicotiana tabacum HOM05D004805 ORTHO05D005756 6.8e-74 282.0 193 69.9
Thecc.07G013300 Theobroma cacao HOM05D004805 ORTHO05D005756 8.9e-74 281.6 176 75.6
AagrBONN_evm.TU.Sc2ySwM_362.484 Anthoceros agrestis HOM05D004805 ORTHO05D005756 1.2e-73 281.2 247 56.7
BraA10t43397Z Brassica rapa HOM05D004805 ORTHO05D005756 3.4e-73 279.6 217 61.8
Pp3c20_23380 Physcomitrium patens HOM05D004805 ORTHO05D005756 8.4e-72 275.0 255 55.3
Lsat_1_v5_gn_4_137701 Lactuca sativa HOM05D004805 ORTHO05D005756 1.1e-71 274.6 196 68.4
Pp3c10_25720 Physcomitrium patens HOM05D004805 ORTHO05D005756 1.4e-71 274.2 246 53.7
SGA_v2.0_scaffold192G40544 Striga asiatica HOM05D001081 ORTHO05D003320 1.9e-71 273.9 232 59.9
Pp3c3_17230 Physcomitrium patens HOM05D004805 ORTHO05D005756 6.6e-69 265.4 245 52.2
Pp3c13_13680 Physcomitrium patens HOM05D004805 ORTHO05D005756 1.1e-68 264.6 245 52.7
AUR62004423 Chenopodium quinoa HOM05D004805 ORTHO05D005756 3.3e-68 263.1 166 75.3
Prupe.4G103800 Prunus persica HOM05D004805 ORTHO05D005756 4.3e-68 262.7 248 56.9
AagrBONN_evm.TU.Sc2ySwM_228.3487 Anthoceros agrestis HOM05D004805 ORTHO05D005756 1.8e-66 257.3 234 54.3
CAN.G849.12 Capsicum annuum HOM05D004805 ORTHO05D005756 1.8e-66 257.3 191 64.4
FAN21G3052 Fragaria x ananassa HOM05D004805 ORTHO05D005756 5.2e-66 255.8 202 62.9
AagrBONN_evm.TU.Sc2ySwM_344.1047 Anthoceros agrestis HOM05D004805 ORTHO05D005756 2.1e-62 243.8 219 55.3
Migut.F01027 Erythranthe guttata HOM05D004805 ORTHO05D005756 3.5e-62 243.0 242 54.1
Ah.05g180060 Amaranthus hybridus HOM05D004805 ORTHO05D005756 6.6e-61 238.8 182 65.4
Hma1.2p1_1516F.1_g288260 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 1.5e-60 237.7 198 63.1
CBR_g34363 Chara braunii HOM05D000019 ORTHO05D000002 3.1e-58 229.9 272 45.6
Lj3g0007860 Lotus japonicus HOM05D004805 ORTHO05D005756 6.9e-58 228.8 244 55.3
CARHR269180 Cardamine hirsuta HOM05D004805 ORTHO05D005756 5.8e-57 225.7 164 64.0
Glyma.19G097900 Glycine max HOM05D004805 ORTHO05D005756 5.8e-57 225.7 143 74.8
Rhsim04G0012600 Rhododendron simsii HOM05D004805 ORTHO05D005756 5.4e-55 219.2 166 68.1
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 4.8e-51 206.1 172 61.0
SMO364G0361 Selaginella moellendorffii HOM05D004805 ORTHO05D005756 4.8e-51 206.1 216 47.2
BraA03t10684Z Brassica rapa HOM05D004805 ORTHO05D005756 1.8e-50 204.1 227 48.5
COL.COLO4_09836 Corchorus olitorius HOM05D004805 ORTHO05D005756 3.1e-50 203.4 137 72.3
AagrBONN_evm.TU.Sc2ySwM_344.1045 Anthoceros agrestis HOM05D004805 ORTHO05D005756 4.5e-49 199.5 199 52.3
Os02g0814900 Oryza sativa ssp. japonica HOM05D004805 ORTHO05D005756 4.2e-47 193.0 203 50.2
BolC3t14047H Brassica oleracea HOM05D004805 ORTHO05D005756 4.6e-46 189.5 242 45.5
Cpa.g.sc26.30 Carica papaya HOM05D004805 ORTHO05D005756 2.1e-43 180.6 112 78.6
Thhalv10015421m.g Eutrema salsugineum HOM05D004805 ORTHO05D005756 1.3e-40 171.4 192 49.0
PRCOL_00003123 Prasinoderma coloniale HOM05D004805 ORTHO05D005756 5.5e-39 166.0 219 41.1
Os09g0347900 Oryza sativa ssp. japonica HOM05D004805 ORTHO05D005756 5.1e-37 159.5 106 67.9
ECA240G4670 Erigeron canadensis HOM05D004805 ORTHO05D005756 1.9e-36 157.5 103 73.8
unitig_0.g252 Utricularia gibba HOM05D004805 ORTHO05D005756 2.5e-36 157.1 104 71.2
PSO170G0902 Papaver somniferum HOM05D004805 ORTHO05D005756 9.6e-36 155.2 103 69.9
Glyma.02G300600 Glycine max HOM05D004805 ORTHO05D005756 2.1e-35 154.1 108 70.4
QL08p004070 Quercus lobata HOM05D000031 ORTHO05D005756 6.9e-34 149.1 215 43.3
Hma1.2p1_0226F.1_g095340 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 2.5e-28 130.6 161 47.8
Cfa025186 Carpinus fangiana HOM05D004805 ORTHO05D005756 1.0e-24 118.6 161 39.8
SEGI_22417 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 1.4e-21 108.2 98 56.1
Oeu037059.1 Olea europaea HOM05D004805 ORTHO05D005756 1.2e-17 95.1 65 67.7
FAN24G2452 Fragaria x ananassa HOM05D004805 ORTHO05D005756 2.9e-16 90.5 55 72.7
ECA234G1395 Erigeron canadensis HOM05D004805 ORTHO05D005756 6.5e-16 89.4 82 57.3
SEGI_01519 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 5.2e-13 79.7 69 58.0
CBR_g34381 Chara braunii HOM05D000019 ORTHO05D000048 5.7e-12 76.3 81 48.1
FAN16G1285 Fragaria x ananassa HOM05D004805 ORTHO05D005756 1.1e-10 72.0 44 70.5
Cre14.g626950 Chlamydomonas reinhardtii HOM05D004805 ORTHO05D005756 9.1e-10 68.9 107 35.5
FAN14G1154 Fragaria x ananassa HOM05D004805 ORTHO05D005756 3.6e-06 57.0 80 41.2


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