Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0988 Trochodendron aralioides HOM05D005057 ORTHO05D006570 8.4e-76 287.0 147 100.0
Nn1g09100 Nelumbo nucifera HOM05D005057 ORTHO05D006570 6.7e-57 224.2 160 75.6
Actinidia16804 Actinidia chinensis HOM05D005057 ORTHO05D006570 2.1e-50 202.6 149 75.2
vmacro03932 Vaccinium macrocarpon HOM05D005057 ORTHO05D006570 1.0e-49 200.3 151 72.8
MBI06_g25988_MAGBIO Magnolia biondii HOM05D005057 ORTHO05D006570 2.3e-49 199.1 145 76.6
ClCG03G007800 Citrullus lanatus HOM05D005057 ORTHO05D006570 2.6e-48 195.7 148 75.0
CiPaw.09G069000 Carya illinoinensis HOM05D005057 ORTHO05D006570 3.3e-48 195.3 152 72.4
PSO063G4235 Papaver somniferum HOM05D005057 ORTHO05D006570 5.7e-48 194.5 152 72.4
PSO782G3653 Papaver somniferum HOM05D005057 ORTHO05D006570 9.7e-48 193.7 152 72.4
CsaV3_1G033430 Cucumis sativus L. HOM05D005057 ORTHO05D006570 3.7e-47 191.8 149 71.8
MELO3C002642.2 Cucumis melo HOM05D005057 ORTHO05D006570 6.3e-47 191.0 145 74.5
Sed0014368 Sechium edule HOM05D005057 ORTHO05D006570 1.1e-46 190.3 147 72.1
ATR0602G189 Amborella trichopoda HOM05D005057 ORTHO05D006570 1.8e-46 189.5 143 72.7
Haze_06250 Corylus avellana HOM05D005057 ORTHO05D006570 3.1e-46 188.7 133 75.2
Duzib160G0357 Durio zibethinus HOM05D005057 ORTHO05D006570 5.3e-46 188.0 146 69.2
Lsat_1_v5_gn_7_23040 Lactuca sativa HOM05D005057 ORTHO05D006570 7.0e-46 187.6 140 71.4
CDE10G0488 Ceratophyllum demersum HOM05D005057 ORTHO05D006570 1.2e-45 186.8 137 73.7
Lalb_Chr18g0059151 Lupinus albus HOM05D005057 ORTHO05D006570 2.0e-45 186.0 148 68.9
Thecc.06G172400 Theobroma cacao HOM05D005057 ORTHO05D006570 2.6e-45 185.7 149 70.5
CANSAT35G0522 Cannabis sativa HOM05D005057 ORTHO05D006570 3.4e-45 185.3 153 69.3
Dinv04618 Davidia involucrata HOM05D005057 ORTHO05D006570 4.5e-45 184.9 119 81.5
QL05p046461 Quercus lobata HOM05D005057 ORTHO05D006570 4.5e-45 184.9 116 82.8
Sopen02g021880 Solanum pennellii HOM05D005057 ORTHO05D006570 4.5e-45 184.9 155 69.7
Solyc02g076950.2 Solanum lycopersicum HOM05D005057 ORTHO05D006570 7.7e-45 184.1 155 69.7
Ciclev10014965m.g Citrus clementina HOM05D005057 ORTHO05D006570 1.0e-44 183.7 156 67.3
Sabra11G0046800 Salix brachista HOM05D005057 ORTHO05D006570 1.0e-44 183.7 162 67.3
SalBow7G0088 Salvia bowleyana HOM05D005057 ORTHO05D006570 1.0e-44 183.7 164 68.3
GSVIVG01021196001 Vitis vinifera HOM05D005057 ORTHO05D006570 1.3e-44 183.3 151 68.9
Lj6g0017686 Lotus japonicus HOM05D005057 ORTHO05D006570 2.2e-44 182.6 147 67.3
Potri.011G065000 Populus trichocarpa HOM05D005057 ORTHO05D006570 3.8e-44 181.8 160 66.9
RcHm_v2.0_Chr5g0010551 Rosa chinensis HOM05D005057 ORTHO05D006570 3.8e-44 181.8 148 68.2
Gohir.A06G130800 Gossypium hirsutum HOM05D005057 ORTHO05D006570 5.0e-44 181.4 127 77.2
DCAR_004016 Daucus carota HOM05D005057 ORTHO05D006570 6.5e-44 181.0 152 69.1
Phvul.006G176700 Phaseolus vulgaris HOM05D005057 ORTHO05D006570 6.5e-44 181.0 164 64.6
MSTRG.13217 Avicennia marina HOM05D005057 ORTHO05D006570 8.5e-44 180.6 172 59.9
Gohir.D06G136700 Gossypium hirsutum HOM05D005057 ORTHO05D006570 8.5e-44 180.6 111 83.8
Gorai.010G158900 Gossypium raimondii HOM05D005057 ORTHO05D006570 8.5e-44 180.6 127 77.2
PGR004G2757 Punica granatum HOM05D005057 ORTHO05D006570 8.5e-44 180.6 143 72.7
Migut.H01447 Erythranthe guttata HOM05D005057 ORTHO05D006570 1.1e-43 180.3 168 65.5
Prupe.4G059900 Prunus persica HOM05D005057 ORTHO05D006570 1.1e-43 180.3 152 68.4
Aqoxy12s001 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 1.9e-43 179.5 95 93.7
Aqoxy4G00443 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 1.9e-43 179.5 95 93.7
Psat1g199000 Pisum sativum HOM05D005057 ORTHO05D006570 4.2e-43 178.3 154 64.9
Atru.chr10.1683 Acer truncatum HOM05D005057 ORTHO05D006570 5.5e-43 177.9 149 67.1
Manes.16G037800 Manihot esculenta HOM05D005057 ORTHO05D006570 5.5e-43 177.9 154 68.2
MD10G1281300 Malus domestica HOM05D005057 ORTHO05D006570 7.2e-43 177.6 154 64.9
AL4G30000 Arabidopsis lyrata HOM05D005057 ORTHO05D006570 9.4e-43 177.2 128 72.7
FAN11G1223 Fragaria x ananassa HOM05D005057 ORTHO05D006570 9.4e-43 177.2 142 69.7
Medtr2g015860 Medicago truncatula HOM05D005057 ORTHO05D006570 9.4e-43 177.2 102 86.3
Lalb_Chr15g0089481 Lupinus albus HOM05D005057 ORTHO05D006570 1.2e-42 176.8 118 77.1
TPR.G30010 Trifolium pratense HOM05D005057 ORTHO05D006570 1.6e-42 176.4 150 64.7
Hma1.2p1_0155F.1_g068170 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 2.1e-42 176.0 158 65.2
AT2G34090 Arabidopsis thaliana HOM05D005057 ORTHO05D006570 2.7e-42 175.6 145 68.3
Sp4g16440 Schrenkiella parvula HOM05D005057 ORTHO05D006570 2.7e-42 175.6 113 80.5
Eucgr.D00512 Eucalyptus grandis HOM05D005057 ORTHO05D006570 3.6e-42 175.3 161 62.7
Sc12g0008060 Simmondsia chinensis HOM05D005057 ORTHO05D006570 3.6e-42 175.3 97 88.7
FvH4_3g07940 Fragaria vesca HOM05D005057 ORTHO05D006570 4.7e-42 174.9 143 66.4
HPP92_020166 Vanilla planifolia HOM05D005057 ORTHO05D006570 4.7e-42 174.9 100 85.0
Thhalv10016658m.g Eutrema salsugineum HOM05D005057 ORTHO05D006570 6.1e-42 174.5 108 83.3
HanXRQChr13g0397391 Helianthus annuus HOM05D005057 ORTHO05D006570 8.0e-42 174.1 136 71.3
Cpa.g.sc7.56 Carica papaya HOM05D005057 ORTHO05D006570 1.0e-41 173.7 142 70.4
Ca_00428_v3 Cicer arietinum L. HOM05D005057 ORTHO05D006570 1.0e-41 173.7 98 88.8
BcaB02g10615 Brassica carinata HOM05D005057 ORTHO05D006570 2.3e-41 172.6 108 82.4
BraA05t20104Z Brassica rapa HOM05D005057 ORTHO05D006570 2.3e-41 172.6 131 71.0
Ca_30957_v3 Cicer arietinum L. HOM05D005057 ORTHO05D006570 2.3e-41 172.6 136 68.4
SGA_v2.0_scaffold307G48045 Striga asiatica HOM05D005057 ORTHO05D006570 2.3e-41 172.6 165 63.0
TWI38G0714 Tripterygium wilfordii HOM05D005057 ORTHO05D006570 2.3e-41 172.6 149 65.8
VMungo0540G0206 Vigna mungo HOM05D005057 ORTHO05D006570 2.3e-41 172.6 104 83.7
Cc02_g14710 Coffea canephora HOM05D005057 ORTHO05D006570 3.0e-41 172.2 131 73.3
ECA236G3111 Erigeron canadensis HOM05D005057 ORTHO05D006570 3.0e-41 172.2 136 69.9
Ah.09g233650 Amaranthus hybridus HOM05D005057 ORTHO05D006570 5.2e-41 171.4 108 81.5
A05p11560 Brassica napus HOM05D005057 ORTHO05D006570 6.7e-41 171.0 125 73.6
C04p15030 Brassica napus HOM05D005057 ORTHO05D006570 6.7e-41 171.0 125 73.6
Carub.0004s1572 Capsella rubella HOM05D005057 ORTHO05D006570 6.7e-41 171.0 124 72.6
FAN25G1331 Fragaria x ananassa HOM05D005057 ORTHO05D006570 6.7e-41 171.0 145 69.0
Glyma.13G230500 Glycine max HOM05D005057 ORTHO05D006570 6.7e-41 171.0 161 61.5
Aa31LG9G13900 Aethionema arabicum HOM05D005057 ORTHO05D006570 8.8e-41 170.6 101 84.2
THA.LOC104814250 Tarenaya hassleriana HOM05D005057 ORTHO05D006570 8.8e-41 170.6 143 67.1
EL10Ac8g20510 Beta vulgaris HOM05D005057 ORTHO05D006570 1.5e-40 169.9 96 88.5
FAN07G2484 Fragaria x ananassa HOM05D005057 ORTHO05D006570 1.5e-40 169.9 146 66.4
Os01g0613900 Oryza sativa ssp. japonica HOM05D005057 ORTHO05D006570 1.5e-40 169.9 139 68.3
AagrBONN_evm.TU.Sc2ySwM_344.2851 Anthoceros agrestis HOM05D005057 ORTHO05D006570 2.0e-40 169.5 95 86.3
arahy.Tifrunner.gnm1.ann1.9TM733 Arachis hypogaea HOM05D005057 ORTHO05D006570 9.7e-40 167.2 93 88.2
arahy.Tifrunner.gnm1.ann1.E17GNY Arachis hypogaea HOM05D005057 ORTHO05D006570 9.7e-40 167.2 93 88.2
Zm00001eb162010 Zea mays HOM05D005057 ORTHO05D006570 1.3e-39 166.8 114 77.2
BolC4t23078H Brassica oleracea HOM05D005057 ORTHO05D006570 1.7e-39 166.4 133 69.2
MD05G1302500 Malus domestica HOM05D005057 ORTHO05D006570 1.1e-38 163.7 100 83.0
Rhsim13G0191300 Rhododendron simsii HOM05D005057 ORTHO05D006570 1.1e-38 163.7 87 93.1
Hund21184 Selenicereus undatus HOM05D005057 ORTHO05D006570 1.1e-38 163.7 113 77.0
Mapoly0152s0011 Marchantia polymorpha HOM05D005057 ORTHO05D006570 2.4e-38 162.5 106 78.3
Oeu041787.3 Olea europaea HOM05D005057 ORTHO05D006570 9.1e-38 160.6 86 93.0
CARHR128190 Cardamine hirsuta HOM05D005057 ORTHO05D006570 1.3e-36 156.8 87 88.5
Pp3c16_13000 Physcomitrium patens HOM05D005057 ORTHO05D006570 1.3e-36 156.8 115 70.4
Lj2A297G103 Lonicera japonica HOM05D005057 ORTHO05D006570 2.2e-36 156.0 86 90.7
unitig_22.g6756 Utricularia gibba HOM05D005057 ORTHO05D006570 2.2e-36 156.0 146 63.0
CAN.G370.63 Capsicum annuum HOM05D005057 ORTHO05D006570 2.9e-36 155.6 87 89.7
FAN16G2413 Fragaria x ananassa HOM05D005057 ORTHO05D006570 2.9e-36 155.6 133 66.9
AUR62031175 Chenopodium quinoa HOM05D005057 ORTHO05D006570 6.5e-36 154.5 87 89.7
Nitab4.5_0003322g0070 Nicotiana tabacum HOM05D005057 ORTHO05D006570 1.6e-34 149.8 153 60.1
Nitab4.5_0000681g0230 Nicotiana tabacum HOM05D005057 ORTHO05D006570 4.7e-34 148.3 154 59.7
Cre01.g033700 Chlamydomonas reinhardtii HOM05D005057 ORTHO05D006570 8.0e-34 147.5 95 78.9
SMO142G0032 Selaginella moellendorffii HOM05D005057 ORTHO05D006570 1.4e-33 146.7 87 81.6
AUR62036592 Chenopodium quinoa HOM05D005057 ORTHO05D006570 3.0e-33 145.6 94 80.9
MCO11G641 Micromonas commoda HOM05D005057 ORTHO05D006570 2.6e-32 142.5 110 66.4
PRCOL_00006187 Prasinoderma coloniale HOM05D005057 ORTHO05D006570 1.8e-30 136.3 96 72.9
BolC4t26729H Brassica oleracea HOM05D005057 ORTHO05D006570 2.4e-30 136.0 110 67.3
BolC7t41970H Brassica oleracea HOM05D005057 ORTHO05D006570 2.4e-30 136.0 109 67.0
FvH4_4g20380 Fragaria vesca HOM05D005057 ORTHO05D006570 3.1e-30 135.6 74 89.2
Glyma.14G170500 Glycine max HOM05D005057 ORTHO05D006570 1.7e-28 129.8 125 58.4
BcaC01g06160 Brassica carinata HOM05D005057 ORTHO05D006570 1.9e-27 126.3 119 63.0
BcaC04g22954 Brassica carinata HOM05D005057 ORTHO05D006570 1.8e-25 119.8 111 64.0
C09p55570 Brassica napus HOM05D005057 ORTHO05D006570 1.8e-25 119.8 111 64.0
BolC9t54241H Brassica oleracea HOM05D005057 ORTHO05D006570 1.8e-25 119.8 111 64.0
MD16G1033100 Malus domestica HOM05D005057 ORTHO05D006570 4.5e-13 78.6 49 77.6
COL.COLO4_25087 Corchorus olitorius HOM05D005057 ORTHO05D006570 5.0e-12 75.1 44 79.5
COL.COLO4_31315 Corchorus olitorius HOM05D005057 ORTHO05D006570 8.6e-12 74.3 83 53.0
Hma1.2p1_0155F.1_g068180 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 1.1e-11 73.9 39 94.9
BcaC01g03610 Brassica carinata HOM05D005057 ORTHO05D019871 3.7e-07 58.9 109 38.5
BolC8t49834H Brassica oleracea HOM05D005057 ORTHO05D019871 1.1e-06 57.4 37 73.0


User provided reference genes

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