Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0959 Trochodendron aralioides HOM05D004479 ORTHO05D005597 4.8e-284 980.7 575 100.0
Nn7g37005 Nelumbo nucifera HOM05D004479 ORTHO05D005597 8.0e-215 750.7 585 79.0
Dinv09182 Davidia involucrata HOM05D004479 ORTHO05D005597 5.4e-211 738.0 585 78.3
Actinidia21882 Actinidia chinensis HOM05D004479 ORTHO05D005597 1.9e-208 729.6 588 74.1
GSVIVG01029540001 Vitis vinifera HOM05D004479 ORTHO05D005597 1.4e-198 696.8 585 72.1
Prupe.1G049400 Prunus persica HOM05D004479 ORTHO05D005597 1.7e-196 689.9 587 71.6
Gohir.A01G221776 Gossypium hirsutum HOM05D004479 ORTHO05D005597 6.4e-196 688.0 589 71.3
QL05p084035 Quercus lobata HOM05D004479 ORTHO05D005597 4.3e-192 675.2 577 69.7
MSTRG.10879 Avicennia marina HOM05D004479 ORTHO05D005597 9.6e-192 674.1 581 71.4
Ciclev10025265m.g Citrus clementina HOM05D004479 ORTHO05D005597 4.8e-191 671.8 592 69.9
Cc04_g00200 Coffea canephora HOM05D004479 ORTHO05D005597 1.1e-190 670.6 557 72.7
Manes.06G177300 Manihot esculenta HOM05D004479 ORTHO05D005597 1.5e-189 666.8 584 70.5
Gorai.010G142700 Gossypium raimondii HOM05D004479 ORTHO05D005597 9.9e-189 664.1 589 70.1
RcHm_v2.0_Chr4g0395701 Rosa chinensis HOM05D004479 ORTHO05D005597 1.9e-187 659.8 581 70.9
CSS0019442 Camellia sinensis var. sinensis HOM05D004479 ORTHO05D005597 3.9e-185 652.1 583 71.0
CANSAT78G0411 Cannabis sativa HOM05D004479 ORTHO05D005597 3.6e-183 645.6 593 67.5
Aqoxy7G02788 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 9.0e-182 641.0 563 73.2
MD16G1227300 Malus domestica HOM05D004479 ORTHO05D005597 5.8e-181 638.3 585 67.0
Potri.010G253100 Populus trichocarpa HOM05D004479 ORTHO05D005597 2.1e-178 629.8 580 64.3
FvH4_4g04880 Fragaria vesca HOM05D004479 ORTHO05D005597 1.5e-176 623.6 579 68.6
CsaV3_3G030520 Cucumis sativus L. HOM05D004479 ORTHO05D005597 3.3e-176 622.5 591 64.1
Migut.I01194 Erythranthe guttata HOM05D004479 ORTHO05D005597 1.3e-175 620.5 585 66.3
Atru.chr1.2695 Acer truncatum HOM05D004479 ORTHO05D005597 4.8e-175 618.6 581 66.1
EL10Ac7g18162 Beta vulgaris HOM05D004479 ORTHO05D005597 6.2e-175 618.2 536 67.7
Medtr5g013930 Medicago truncatula HOM05D004479 ORTHO05D005597 6.2e-175 618.2 583 63.1
Solyc03g123960.3 Solanum lycopersicum HOM05D004479 ORTHO05D005597 6.2e-175 618.2 577 69.0
COL.COLO4_31168 Corchorus olitorius HOM05D004479 ORTHO05D005597 3.1e-174 615.9 533 71.1
MELO3C026710.2 Cucumis melo HOM05D004479 ORTHO05D005597 4.0e-174 615.5 585 65.1
TPR.G5557 Trifolium pratense HOM05D004479 ORTHO05D005597 9.0e-174 614.4 565 67.3
MBI13_g34036_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 1.2e-173 614.0 506 73.1
Nitab4.5_0004918g0010 Nicotiana tabacum HOM05D004479 ORTHO05D005597 7.6e-173 611.3 577 69.5
HanXRQChr12g0359691 Helianthus annuus HOM05D004479 ORTHO05D005597 1.7e-172 610.1 556 68.0
FAN17G0751 Fragaria x ananassa HOM05D004479 ORTHO05D005597 1.6e-170 603.6 590 63.4
FAN22G0181 Fragaria x ananassa HOM05D004479 ORTHO05D005597 1.6e-170 603.6 539 68.6
ClCG07G014640 Citrullus lanatus HOM05D004479 ORTHO05D005597 4.6e-170 602.1 566 63.8
arahy.Tifrunner.gnm1.ann1.HYUF3S Arachis hypogaea HOM05D004479 ORTHO05D005597 1.0e-169 600.9 556 68.3
Glyma.12G188300 Glycine max HOM05D004479 ORTHO05D005597 1.8e-169 600.1 557 66.4
Sopen03g041690 Solanum pennellii HOM05D004479 ORTHO05D005597 2.3e-169 599.7 613 64.6
arahy.Tifrunner.gnm1.ann1.SFLF9H Arachis hypogaea HOM05D004479 ORTHO05D005597 3.0e-169 599.4 556 68.2
Thecc.06G058800 Theobroma cacao HOM05D004479 ORTHO05D005597 6.7e-169 598.2 583 65.4
Eucgr.J03177 Eucalyptus grandis HOM05D004479 ORTHO05D005597 1.5e-168 597.0 602 63.5
MBI13_g01743_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 2.5e-168 596.3 511 71.2
Sabra10G0196900 Salix brachista HOM05D004479 ORTHO05D005597 7.4e-168 594.7 661 59.8
RcHm_v2.0_Chr4g0395721 Rosa chinensis HOM05D004479 ORTHO05D005597 1.3e-167 594.0 501 73.3
Nitab4.5_0002664g0040 Nicotiana tabacum HOM05D004479 ORTHO05D005597 1.6e-167 593.6 592 68.4
PSO170G2367 Papaver somniferum HOM05D004479 ORTHO05D005597 1.6e-167 593.6 576 67.7
Ca_21726_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 2.8e-167 592.8 567 67.7
Rhsim08G0249800 Rhododendron simsii HOM05D004479 ORTHO05D005597 1.1e-166 590.9 554 68.6
Duzib192G0061 Durio zibethinus HOM05D004479 ORTHO05D005597 3.1e-166 589.3 583 63.6
VMungo1080G0276 Vigna mungo HOM05D004479 ORTHO05D005597 4.1e-166 589.0 561 67.6
CAN.G790.12 Capsicum annuum HOM05D004479 ORTHO05D005597 6.9e-166 588.2 583 66.6
Gohir.A06G118600 Gossypium hirsutum HOM05D004479 ORTHO05D005597 5.8e-165 585.1 589 65.7
Phvul.005G185100 Phaseolus vulgaris HOM05D004479 ORTHO05D005597 5.0e-164 582.0 560 66.6
TWI09G1491 Tripterygium wilfordii HOM05D004479 ORTHO05D005597 1.1e-163 580.9 509 67.2
vmacro18747 Vaccinium macrocarpon HOM05D004479 ORTHO05D005597 4.2e-163 578.9 634 57.6
PSO384G0383 Papaver somniferum HOM05D004479 ORTHO05D005597 2.7e-162 576.2 579 67.0
Lsat_1_v5_gn_5_137281 Lactuca sativa HOM05D004479 ORTHO05D005597 1.0e-161 574.3 527 70.0
HPP92_008247 Vanilla planifolia HOM05D004479 ORTHO05D005597 2.3e-161 573.2 580 60.3
Oeu049641.1 Olea europaea HOM05D004479 ORTHO05D005597 5.1e-161 572.0 616 58.6
PGR119G2289 Punica granatum HOM05D004479 ORTHO05D005597 1.1e-160 570.9 566 65.7
Sed0022371 Sechium edule HOM05D004479 ORTHO05D005597 1.5e-160 570.5 557 64.1
Cfa002151 Carpinus fangiana HOM05D004479 ORTHO05D005597 9.7e-160 567.8 504 69.8
Hund18609 Selenicereus undatus HOM05D004479 ORTHO05D005597 1.3e-159 567.4 598 60.0
Zm00001eb320420 Zea mays HOM05D004479 ORTHO05D005597 8.2e-159 564.7 563 58.4
THA.LOC104800314 Tarenaya hassleriana HOM05D004479 ORTHO05D005597 2.4e-158 563.1 602 59.1
ATR0626G211 Amborella trichopoda HOM05D004479 ORTHO05D005597 3.1e-158 562.8 554 59.7
PSO063G0217 Papaver somniferum HOM05D004479 ORTHO05D005597 5.3e-158 562.0 581 65.2
Hma1.2p1_1111F.1_g258400 Hydrangea macrophylla HOM05D004479 ORTHO05D005597 2.0e-157 560.1 483 74.5
Sc12g0011150 Simmondsia chinensis HOM05D004479 ORTHO05D005597 6.1e-154 548.5 560 63.2
ECA234G3188 Erigeron canadensis HOM05D001810 ORTHO05D005662 2.2e-151 540.0 541 63.4
Ah.15g094320 Amaranthus hybridus HOM05D004479 ORTHO05D005597 1.4e-150 537.3 579 61.5
CDE02G4004 Ceratophyllum demersum HOM05D004479 ORTHO05D005597 5.9e-149 531.9 563 57.5
Lj3g0018425 Lotus japonicus HOM05D004479 ORTHO05D005597 8.5e-148 528.1 522 64.9
Peaxi162Scf00038g02656 Petunia axillaris HOM05D004479 ORTHO05D005597 2.6e-144 516.5 569 56.4
Aa31LG2G7330 Aethionema arabicum HOM05D004479 ORTHO05D005597 7.4e-144 515.0 554 58.3
Nitab4.5_0005664g0060 Nicotiana tabacum HOM05D004479 ORTHO05D005597 2.2e-143 513.5 554 56.9
Sp2g14070 Schrenkiella parvula HOM05D004479 ORTHO05D005597 7.0e-142 508.4 572 58.0
Lj6C65T2 Lonicera japonica HOM05D004479 ORTHO05D005597 7.7e-141 505.0 410 76.3
AUR62001343 Chenopodium quinoa HOM05D004479 ORTHO05D005597 2.9e-140 503.1 591 55.3
CARHR213680 Cardamine hirsuta HOM05D004479 ORTHO05D005597 5.0e-140 502.3 588 57.7
Hund18598 Selenicereus undatus HOM05D004479 ORTHO05D005597 3.2e-139 499.6 491 62.7
SalBow6G0079 Salvia bowleyana HOM05D004479 ORTHO05D005597 6.1e-138 495.4 583 52.8
Psat5g288040 Pisum sativum HOM05D004479 ORTHO05D005597 1.1e-136 491.1 466 66.5
unitig_748.g8028 Utricularia gibba HOM05D004479 ORTHO05D005597 4.4e-136 489.2 597 53.4
Gohir.D06G122500 Gossypium hirsutum HOM05D004479 ORTHO05D005597 5.7e-136 488.8 447 68.0
AT2G03070 Arabidopsis thaliana HOM05D004479 ORTHO05D005597 1.4e-129 467.6 577 55.6
Ca_04816_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 1.2e-128 464.5 560 57.5
Glyma.13G372700 Glycine max HOM05D004479 ORTHO05D005597 9.8e-128 461.5 459 66.4
AUR62025661 Chenopodium quinoa HOM05D004479 ORTHO05D005597 4.5e-125 452.6 510 55.5
SGA_v2.0_scaffold122G33268 Striga asiatica HOM05D004479 ORTHO05D005597 1.1e-123 448.0 324 75.0
Thhalv10004003m.g Eutrema salsugineum HOM05D004479 ORTHO05D005597 7.2e-123 445.3 577 52.9
Carub.0005s0192 Capsella rubella HOM05D004479 ORTHO05D005597 2.7e-122 443.4 574 53.7
A09p24080 Brassica napus HOM05D004479 ORTHO05D005597 6.8e-121 438.7 575 55.3
BraA09t38008Z Brassica rapa HOM05D004479 ORTHO05D005597 1.2e-120 438.0 576 55.4
PGSC0003DMG400009164 Solanum tuberosum HOM05D004479 ORTHO05D005597 1.7e-119 434.1 390 71.8
DCAR_030619 Daucus carota HOM05D004479 ORTHO05D005597 3.7e-119 433.0 386 66.3
BcaC04g21507 Brassica carinata HOM05D004479 ORTHO05D005597 2.4e-118 430.3 571 53.2
BcaB07g30687 Brassica carinata HOM05D004479 ORTHO05D005597 5.4e-118 429.1 539 55.3
C09p30960 Brassica napus HOM05D004479 ORTHO05D005597 2.0e-117 427.2 571 53.1
BolC9t55955H Brassica oleracea HOM05D004479 ORTHO05D005597 2.0e-117 427.2 571 53.1
PSO836G0001 Papaver somniferum HOM05D004479 ORTHO05D005597 1.5e-112 411.0 489 61.6
Dinv37782 Davidia involucrata HOM05D004479 ORTHO05D005597 1.1e-110 404.8 366 75.4
AL5G12650 Arabidopsis lyrata HOM05D004479 ORTHO05D005597 2.4e-110 403.7 571 51.5
Dinv37783 Davidia involucrata HOM05D004479 ORTHO05D005597 5.1e-92 342.8 218 85.8
Os03g0423800 Oryza sativa ssp. japonica HOM05D004479 ORTHO05D005597 7.6e-88 328.9 255 66.7
Haze_16264 Corylus avellana HOM05D004479 ORTHO05D005597 5.6e-83 312.8 208 77.9
Cpa.g.sc1515.2 Carica papaya HOM05D004479 ORTHO05D005597 3.1e-81 307.0 221 72.9
BraA06t27217Z Brassica rapa HOM05D004479 ORTHO05D005597 1.5e-64 251.5 247 55.9
BolC7t43874H Brassica oleracea HOM05D004479 ORTHO05D005597 2.6e-64 250.8 241 57.7
BcaC06g31203 Brassica carinata HOM05D004479 ORTHO05D005597 4.5e-64 250.0 243 55.6
BcaC06g34021 Brassica carinata HOM05D004479 ORTHO05D005597 3.8e-63 246.9 231 58.0
Pp3c18_4030 Physcomitrium patens HOM05D004479 ORTHO05D005597 7.9e-61 239.2 300 48.3
Aqoxy377s002 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 1.5e-59 235.0 184 73.9
Oeu062492.1 Olea europaea HOM05D004479 ORTHO05D005597 5.6e-59 233.0 239 56.1
A06p43310 Brassica napus HOM05D004479 ORTHO05D005597 4.8e-58 229.9 272 49.6
Psat1g118080 Pisum sativum HOM05D004479 ORTHO05D005597 3.2e-54 217.2 167 68.9
Mapoly0029s0023 Marchantia polymorpha HOM05D004479 ORTHO05D005597 6.3e-50 203.0 599 35.4
CiPaw.01G090700 Carya illinoinensis HOM05D004479 ORTHO05D005597 1.4e-49 201.8 221 58.4
C07p33640 Brassica napus HOM05D004479 ORTHO05D005597 7.2e-46 189.5 241 49.4
AagrBONN_evm.TU.Sc2ySwM_117.2251 Anthoceros agrestis HOM05D004479 ORTHO05D005597 6.7e-44 183.0 203 48.3
SMO114G0145 Selaginella moellendorffii HOM05D004479 ORTHO05D005597 8.7e-44 182.6 215 47.0
AagrBONN_evm.TU.Sc2ySwM_117.1357 Anthoceros agrestis HOM05D004479 ORTHO05D005597 1.1e-41 175.6 205 46.3
CBR_g41305 Chara braunii HOM05D004479 ORTHO05D005597 2.4e-41 174.5 279 41.2
SEGI_11469 Sequoiadendron giganteum HOM05D004479 ORTHO05D005597 1.1e-35 155.6 154 52.6
CARHR145470 Cardamine hirsuta HOM05D004479 ORTHO05D005597 1.1e-33 149.1 106 75.5
Psat0s1762g0040 Pisum sativum HOM05D004479 ORTHO05D005597 2.0e-32 144.8 184 48.4
Psat0s1227g0080 Pisum sativum HOM05D000020 ORTHO05D015801 4.5e-32 143.7 160 57.5
COL.COLO4_31578 Corchorus olitorius HOM05D001810 ORTHO05D005662 4.7e-29 133.7 216 44.4
Cpa.g.sc155.18 Carica papaya HOM05D004479 ORTHO05D005597 7.4e-27 126.3 103 70.9
Actinidia21652 Actinidia chinensis HOM05D004479 ORTHO05D005597 4.5e-24 117.1 109 61.5
QL03p033126 Quercus lobata HOM05D004479 ORTHO05D005597 1.5e-22 112.1 69 81.2
Psat7g008520 Pisum sativum HOM05D004479 ORTHO05D005597 2.3e-20 104.8 89 65.2
DCAR_030620 Daucus carota HOM05D004479 ORTHO05D005597 3.0e-20 104.4 101 64.4
Psat0s2660g0040 Pisum sativum HOM05D000020 ORTHO05D015801 2.6e-19 101.3 88 63.6
SEGI_18721 Sequoiadendron giganteum HOM05D004479 ORTHO05D005597 1.3e-18 99.0 91 57.1
SHI42840 Sapria himalayana HOM05D004479 ORTHO05D005597 1.8e-17 95.1 133 45.9
QL05p046913 Quercus lobata HOM05D004479 ORTHO05D005597 5.3e-17 93.6 110 57.3
SHI42601 Sapria himalayana HOM05D004479 ORTHO05D005597 4.5e-16 90.5 154 40.3
Psat3g045760 Pisum sativum HOM05D004392 ORTHO05D004846 5.0e-15 87.0 69 65.2
FAN12G4029 Fragaria x ananassa HOM05D002474 ORTHO05D007142 6.5e-15 86.7 117 53.0
SHI24407 Sapria himalayana HOM05D004479 ORTHO05D005597 8.5e-15 86.3 169 39.6
COL.COLO4_18371 Corchorus olitorius HOM05D004479 ORTHO05D005597 1.5e-11 75.5 68 52.9
SHI50578 Sapria himalayana HOM05D004479 ORTHO05D005597 3.4e-11 74.3 248 31.5
SHI31116 Sapria himalayana HOM05D004479 ORTHO05D005597 7.5e-11 73.2 53 62.3
SHI42976 Sapria himalayana HOM05D004479 ORTHO05D005597 9.8e-11 72.8 115 41.7
Hma1.2p1_0370F.1_g138010 Hydrangea macrophylla HOM05D004479 ORTHO05D005597 1.3e-10 72.4 74 62.2
Cpa.g.sc1515.1 Carica papaya HOM05D004479 ORTHO05D005597 4.8e-10 70.5 128 60.2
Peaxi162Scf00038g02640 Petunia axillaris HOM05D004479 ORTHO05D029161 6.3e-10 70.1 44 75.0
Psat3g175600 Pisum sativum HOM05D004479 ORTHO05D005597 2.4e-09 68.2 67 53.7
Haze_16261 Corylus avellana HOM05D004479 ORTHO05D029161 3.1e-09 67.8 68 60.3
Haze_18674 Corylus avellana HOM05D004479 ORTHO05D005597 3.1e-09 67.8 40 82.5
BcaC04g22058 Brassica carinata HOM05D006908 ORTHO05D008662 5.4e-09 67.0 38 84.2
C09p24010 Brassica napus HOM05D002960 ORTHO05D042139 5.4e-09 67.0 38 84.2
BolC9t55321H Brassica oleracea HOM05D002960 ORTHO05D042139 5.4e-09 67.0 38 84.2
Psat0s1227g0040 Pisum sativum HOM05D000280 ORTHO05D015801 9.1e-09 66.2 58 62.1
Nitab4.5_0005739g0060 Nicotiana tabacum HOM05D004479 ORTHO05D029161 1.2e-08 65.9 102 51.0
SHI49595 Sapria himalayana HOM05D004479 ORTHO05D005597 1.2e-08 65.9 113 40.7
SHI31115 Sapria himalayana HOM05D004479 ORTHO05D005597 2.0e-08 65.1 44 70.5
SHI34972 Sapria himalayana HOM05D004479 ORTHO05D005597 3.5e-08 64.3 251 27.1
QL08p038027 Quercus lobata HOM05D004479 ORTHO05D337893 5.9e-08 63.5 200 32.5
SHI36675 Sapria himalayana HOM05D004479 ORTHO05D005597 1.3e-07 62.4 54 61.1
COL.COLO4_27264 Corchorus olitorius HOM05D004479 ORTHO05D005597 2.9e-07 61.2 58 48.3
SHI13126 Sapria himalayana HOM05D000105 ORTHO05D000023 3.2e-06 57.8 54 55.6
BcaC02g11491 Brassica carinata HOM05D019637 ORTHO05D018695 5.5e-06 57.0 39 79.5
C04p14790 Brassica napus HOM05D004479 ORTHO05D018695 5.5e-06 57.0 39 79.5
BolC4t23053H Brassica oleracea HOM05D004479 ORTHO05D018695 5.5e-06 57.0 39 79.5


User provided reference genes

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