Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0940 Trochodendron aralioides HOM05D000184 ORTHO05D006798 6.5e-61 237.3 124 100.0
Duzib192G0349 Durio zibethinus HOM05D000184 ORTHO05D000032 1.4e-18 96.7 107 57.0
TWI75G1407 Tripterygium wilfordii HOM05D000184 ORTHO05D000032 4.0e-18 95.1 105 56.2
Haze_16162 Corylus avellana HOM05D000184 ORTHO05D000032 6.8e-18 94.4 101 58.4
Cfa003443 Carpinus fangiana HOM05D000184 ORTHO05D000032 1.2e-17 93.6 101 58.4
QL05p089057 Quercus lobata HOM05D000184 ORTHO05D000032 2.6e-17 92.4 101 58.4
TAR383G0056 Trochodendron aralioides HOM05D005686 ORTHO05D006798 4.4e-17 91.7 107 57.9
GSVIVG01029458001 Vitis vinifera HOM05D000184 ORTHO05D000032 9.8e-17 90.5 103 56.3
TWI12G0722 Tripterygium wilfordii HOM05D000184 ORTHO05D000032 1.7e-16 89.7 100 56.0
Nn8g41270 Nelumbo nucifera HOM05D000184 ORTHO05D000032 2.2e-16 89.4 107 55.1
Thecc.06G050900 Theobroma cacao HOM05D000184 ORTHO05D000032 9.1e-15 84.0 107 49.5
Ciclev10030185m.g Citrus clementina HOM05D000184 ORTHO05D000032 2.0e-14 82.8 110 52.7
CiPaw.01G209400 Carya illinoinensis HOM05D000184 ORTHO05D000032 2.2e-13 79.3 100 50.0
COL.COLO4_26819 Corchorus olitorius HOM05D000184 ORTHO05D000032 1.9e-12 76.3 105 50.5
EL10Ac7g18107 Beta vulgaris HOM05D000184 ORTHO05D000032 3.2e-12 75.5 101 52.5
Potri.007G003200 Populus trichocarpa HOM05D000184 ORTHO05D000032 7.2e-12 74.3 100 52.0
MBI13_g45276_MAGBIO Magnolia biondii HOM05D000184 ORTHO05D000032 2.7e-11 72.4 103 49.5
Actinidia38819 Actinidia chinensis HOM05D000184 ORTHO05D000032 8.0e-11 70.9 103 48.5
RcHm_v2.0_Chr2g0148421 Rosa chinensis HOM05D000184 ORTHO05D000032 1.4e-10 70.1 102 52.9
MD09G1169000 Malus domestica HOM05D000184 ORTHO05D000032 2.3e-10 69.3 102 50.0
Hma1.2p1_0073F.1_g038430 Hydrangea macrophylla HOM05D000184 ORTHO05D000032 3.0e-10 68.9 100 51.0
Gorai.009G120900 Gossypium raimondii HOM05D000184 ORTHO05D000032 6.8e-10 67.8 113 50.4
FAN02G0533 Fragaria x ananassa HOM05D000184 ORTHO05D000032 8.8e-10 67.4 94 52.1
FAN02G1893 Fragaria x ananassa HOM05D000184 ORTHO05D000032 8.8e-10 67.4 94 52.1
Prupe.3G027400 Prunus persica HOM05D000184 ORTHO05D000032 8.8e-10 67.4 97 45.4
Sabra07G0002300 Salix brachista HOM05D000184 ORTHO05D000032 1.2e-09 67.0 100 50.0
FAN09G2960 Fragaria x ananassa HOM05D000184 ORTHO05D000032 1.5e-09 66.6 95 51.6
MBI13_g08744_MAGBIO Magnolia biondii HOM05D000184 ORTHO05D000032 1.5e-09 66.6 109 48.6
Gohir.A10G001000 Gossypium hirsutum HOM05D000184 ORTHO05D000032 3.4e-09 65.5 103 48.5
Hund05660 Selenicereus undatus HOM05D000184 ORTHO05D000032 3.4e-09 65.5 107 45.8
Manes.06G178000 Manihot esculenta HOM05D000184 ORTHO05D000032 5.7e-09 64.7 101 46.5
Ah.15g094240 Amaranthus hybridus HOM05D000184 ORTHO05D000032 7.5e-09 64.3 103 46.6
Eucgr.F04055 Eucalyptus grandis HOM05D000184 ORTHO05D000032 7.5e-09 64.3 98 46.9
FAN05G1546 Fragaria x ananassa HOM05D000184 ORTHO05D000032 7.5e-09 64.3 95 49.5
Gorai.011G001500 Gossypium raimondii HOM05D000184 ORTHO05D000032 1.7e-08 63.2 103 48.5
AUR62025689 Chenopodium quinoa HOM05D000184 ORTHO05D000032 2.2e-08 62.8 96 44.8
CiPaw.02G129600 Carya illinoinensis HOM05D000184 ORTHO05D000032 2.8e-08 62.4 99 44.4
FvH4_6g36430 Fragaria vesca HOM05D000184 ORTHO05D000032 3.7e-08 62.0 100 51.0
Gohir.D10G001200 Gossypium hirsutum HOM05D000184 ORTHO05D000032 4.9e-08 61.6 103 47.6
AUR62001307 Chenopodium quinoa HOM05D000184 ORTHO05D000032 8.3e-08 60.8 67 55.2
Gohir.A05G116080 Gossypium hirsutum HOM05D000184 ORTHO05D000032 1.8e-07 59.7 105 49.5
Cpa.g.sc10.14 Carica papaya HOM05D000184 ORTHO05D000032 4.1e-07 58.5 102 40.2
Gohir.D05G116900 Gossypium hirsutum HOM05D000184 ORTHO05D000032 9.2e-07 57.4 106 49.1
FAN14G0750 Fragaria x ananassa HOM05D000184 ORTHO05D000032 4.5e-06 55.1 99 44.4
AL3G24750 Arabidopsis lyrata HOM05D000184 ORTHO05D000032 5.9e-06 54.7 101 40.6


User provided reference genes

Program Settings