Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0912 Trochodendron aralioides HOM05D003761 ORTHO05D004412 2.1e-106 389.0 193 100.0
Nn1g07502 Nelumbo nucifera HOM05D003761 ORTHO05D004412 2.6e-53 212.6 187 61.5
MBI18_g42884_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 8.0e-50 201.1 193 53.9
CiPaw.09G108600 Carya illinoinensis HOM05D003761 ORTHO05D004412 1.4e-49 200.3 189 56.1
Cfa000041 Carpinus fangiana HOM05D003761 ORTHO05D004412 2.3e-49 199.5 185 55.7
Aqoxy4G01086 Aquilegia oxysepala HOM05D003761 ORTHO05D004412 4.0e-49 198.7 189 54.5
Potri.006G005600 Populus trichocarpa HOM05D003761 ORTHO05D004412 1.2e-48 197.2 185 54.1
Haze_07014 Corylus avellana HOM05D003761 ORTHO05D004412 1.3e-47 193.7 185 55.1
Thecc.06G240300 Theobroma cacao HOM05D003761 ORTHO05D004412 1.7e-47 193.4 167 61.7
CSS0009294 Camellia sinensis var. sinensis HOM05D003761 ORTHO05D004412 2.8e-47 192.6 142 64.8
CSS0045719 Camellia sinensis var. sinensis HOM05D003761 ORTHO05D004412 2.8e-47 192.6 142 64.8
PGR042G2523 Punica granatum HOM05D003761 ORTHO05D004412 2.8e-47 192.6 180 56.1
PSO541G3650 Papaver somniferum HOM05D003761 ORTHO05D004412 4.8e-47 191.8 196 55.1
Potri.016G006200 Populus trichocarpa HOM05D003761 ORTHO05D004412 4.8e-47 191.8 184 53.8
Sabra06G0004500 Salix brachista HOM05D003761 ORTHO05D004412 8.3e-47 191.0 189 51.3
PSO675G1588 Papaver somniferum HOM05D003761 ORTHO05D004412 3.1e-46 189.1 196 54.1
Hma1.2p1_1175F.1_g263990 Hydrangea macrophylla HOM05D003761 ORTHO05D004412 5.3e-46 188.3 157 59.9
Cpa.g.sc27.232 Carica papaya HOM05D003761 ORTHO05D004412 7.0e-46 188.0 158 60.8
Ciclev10016770m.g Citrus clementina HOM05D003761 ORTHO05D004412 1.2e-45 187.2 181 58.0
MBI18_g27019_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 1.2e-45 187.2 149 60.4
Actinidia39257 Actinidia chinensis HOM05D003761 ORTHO05D004412 3.5e-45 185.7 158 59.5
Lj2C256G8 Lonicera japonica HOM05D003761 ORTHO05D004412 7.7e-45 184.5 183 53.0
Rhsim13G0141000 Rhododendron simsii HOM05D003761 ORTHO05D004412 1.0e-44 184.1 177 55.9
Duzib192G0597 Durio zibethinus HOM05D003761 ORTHO05D004412 2.2e-44 183.0 181 54.7
Actinidia11903 Actinidia chinensis HOM05D003761 ORTHO05D004412 2.9e-44 182.6 180 55.6
Atru.chr1.2273 Acer truncatum HOM05D003761 ORTHO05D004412 5.5e-43 178.3 195 52.8
QL05p067831 Quercus lobata HOM05D003761 ORTHO05D004412 7.2e-43 177.9 195 47.2
Dinv15342 Davidia involucrata HOM05D003761 ORTHO05D004412 9.4e-43 177.6 166 58.4
Sabra16G0011000 Salix brachista HOM05D003761 ORTHO05D004412 9.4e-43 177.6 183 51.9
vmacro03612 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 4.7e-42 175.3 184 53.8
FAN25G2178 Fragaria x ananassa HOM05D003761 ORTHO05D004412 6.1e-42 174.9 174 52.9
Lalb_Chr15g0088211 Lupinus albus HOM05D003761 ORTHO05D004412 1.8e-41 173.3 162 54.3
CANSAT56G1869 Cannabis sativa HOM05D003761 ORTHO05D004412 2.3e-41 172.9 157 55.4
Lsat_1_v5_gn_1_130120 Lactuca sativa HOM05D003761 ORTHO05D004412 3.0e-41 172.6 169 50.9
Manes.09G083000 Manihot esculenta HOM05D003761 ORTHO05D004412 3.0e-41 172.6 176 51.1
FvH4_3g00370 Fragaria vesca HOM05D003761 ORTHO05D004412 4.0e-41 172.2 172 52.9
FAN21G2431 Fragaria x ananassa HOM05D003761 ORTHO05D004412 3.4e-40 169.1 174 51.7
Gorai.010G248800 Gossypium raimondii HOM05D003761 ORTHO05D004412 5.7e-40 168.3 165 53.3
MBI19_g14888_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 9.8e-40 167.5 164 55.5
HPP92_024932 Vanilla planifolia HOM05D003761 ORTHO05D004412 1.3e-39 167.2 190 48.9
COL.COLO4_31936 Corchorus olitorius HOM05D003761 ORTHO05D004412 2.2e-39 166.4 144 57.6
CsaV3_1G015780 Cucumis sativus L. HOM05D003761 ORTHO05D004412 2.2e-39 166.4 192 46.4
CsaV3_UNG065500 Cucumis sativus L. HOM05D003761 ORTHO05D004412 2.2e-39 166.4 192 46.4
Gohir.A06G204100 Gossypium hirsutum HOM05D003761 ORTHO05D004412 3.7e-39 165.6 166 51.8
HPP92_024936 Vanilla planifolia HOM05D003761 ORTHO05D004412 3.7e-39 165.6 190 48.4
MD10G1338600 Malus domestica HOM05D003761 ORTHO05D004412 4.9e-39 165.2 205 47.3
Prupe.4G004300 Prunus persica HOM05D003761 ORTHO05D004412 4.9e-39 165.2 164 54.9
ECA248G3040 Erigeron canadensis HOM05D003761 ORTHO05D004412 6.3e-39 164.9 173 47.4
HanXRQChr01g0003591 Helianthus annuus HOM05D003761 ORTHO05D004412 8.3e-39 164.5 176 48.9
GSVIVG01005138001 Vitis vinifera HOM05D003761 ORTHO05D004412 8.3e-39 164.5 155 56.8
Gohir.D06G217400 Gossypium hirsutum HOM05D003761 ORTHO05D004412 1.1e-38 164.1 165 51.5
MD05G1360900 Malus domestica HOM05D003761 ORTHO05D004412 1.4e-38 163.7 177 51.4
MELO3C025526.2 Cucumis melo HOM05D003761 ORTHO05D004412 1.8e-38 163.3 192 45.3
Sc24g0000400 Simmondsia chinensis HOM05D003761 ORTHO05D004412 3.1e-38 162.5 163 52.8
Oeu002779.1 Olea europaea HOM05D003761 ORTHO05D004412 4.1e-38 162.2 174 51.7
CDE10G1059 Ceratophyllum demersum HOM05D003761 ORTHO05D004412 7.0e-38 161.4 149 57.0
Eucgr.E03855 Eucalyptus grandis HOM05D003761 ORTHO05D004412 9.1e-38 161.0 170 52.4
ClCG01G010750 Citrullus lanatus HOM05D003761 ORTHO05D004412 1.2e-37 160.6 195 47.7
Lsat_1_v5_gn_7_13080 Lactuca sativa HOM05D003761 ORTHO05D004412 1.2e-37 160.6 177 48.6
Sed0014180 Sechium edule HOM05D003761 ORTHO05D004412 1.2e-37 160.6 167 52.1
vmacro03611 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 3.5e-37 159.1 170 52.9
vmacro23224 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 3.5e-37 159.1 170 52.9
MSTRG.14590 Avicennia marina HOM05D003761 ORTHO05D004412 1.3e-36 157.1 186 47.8
Phvul.003G086700 Phaseolus vulgaris HOM05D003761 ORTHO05D004412 1.7e-36 156.8 160 50.0
Glyma.17G005900 Glycine max HOM05D003761 ORTHO05D004412 2.3e-36 156.4 178 50.6
Eucgr.L00155 Eucalyptus grandis HOM05D003761 ORTHO05D004412 2.9e-36 156.0 161 49.7
TWI38G2030 Tripterygium wilfordii HOM05D003761 ORTHO05D004412 3.6e-34 149.1 155 52.3
Lj6g0023004 Lotus japonicus HOM05D003761 ORTHO05D004412 6.1e-34 148.3 167 47.3
arahy.Tifrunner.gnm1.ann1.UZ71G8 Arachis hypogaea HOM05D003761 ORTHO05D004412 1.8e-33 146.7 177 45.2
AUR62021816 Chenopodium quinoa HOM05D003761 ORTHO05D004412 1.8e-33 146.7 166 47.0
Eucgr.L00154 Eucalyptus grandis HOM05D003761 ORTHO05D004412 1.8e-33 146.7 161 48.4
Sed0021615 Sechium edule HOM05D003761 ORTHO05D004412 1.8e-33 146.7 168 42.9
Migut.H01629 Erythranthe guttata HOM05D003761 ORTHO05D004412 2.3e-33 146.4 179 47.5
Actinidia02285 Actinidia chinensis HOM05D000829 ORTHO05D000690 3.0e-33 146.0 151 56.3
arahy.Tifrunner.gnm1.ann1.YY2BB8 Arachis hypogaea HOM05D003761 ORTHO05D004412 8.9e-33 144.4 178 44.9
AUR62012843 Chenopodium quinoa HOM05D003761 ORTHO05D004412 8.9e-33 144.4 163 48.5
VMungo1215G0779 Vigna mungo HOM05D003761 ORTHO05D004412 8.9e-33 144.4 159 47.8
Lalb_Chr13g0304361 Lupinus albus HOM05D003761 ORTHO05D004412 5.7e-32 141.7 155 47.1
CAN.G1186.30 Capsicum annuum HOM05D003761 ORTHO05D004412 9.8e-32 141.0 181 45.3
Lj4g0001357 Lotus japonicus HOM05D003761 ORTHO05D004412 9.8e-32 141.0 180 45.0
TWI38G1412 Tripterygium wilfordii HOM05D003761 ORTHO05D004412 2.2e-31 139.8 161 47.8
EL10Ac8g20260 Beta vulgaris HOM05D003761 ORTHO05D004412 3.7e-31 139.0 165 46.7
DCAR_030834 Daucus carota HOM05D003761 ORTHO05D004412 3.7e-31 139.0 172 44.2
Oeu057021.1 Olea europaea HOM05D003761 ORTHO05D004412 6.3e-31 138.3 143 46.9
Sopen11g006960 Solanum pennellii HOM05D003761 ORTHO05D004412 6.3e-31 138.3 156 46.2
MSTRG.7132 Avicennia marina HOM05D003761 ORTHO05D004412 8.3e-31 137.9 162 49.4
Oeu025960.1 Olea europaea HOM05D003761 ORTHO05D004412 8.3e-31 137.9 166 45.8
Medtr4g133932 Medicago truncatula HOM05D003761 ORTHO05D004412 1.4e-30 137.1 188 44.7
Psat4g002880 Pisum sativum HOM05D003761 ORTHO05D004412 2.4e-30 136.3 194 43.8
Ca_20995_v3 Cicer arietinum L. HOM05D003761 ORTHO05D004412 7.0e-30 134.8 148 48.6
MSTRG.13107 Avicennia marina HOM05D003761 ORTHO05D004412 9.2e-30 134.4 179 43.6
TPR.G5987 Trifolium pratense HOM05D003761 ORTHO05D004412 2.7e-29 132.9 180 45.6
PGSC0003DMG400013274 Solanum tuberosum HOM05D003761 ORTHO05D004412 3.5e-29 132.5 150 47.3
Oeu025400.1 Olea europaea HOM05D003761 ORTHO05D004412 7.8e-29 131.3 167 43.1
Solyc11g012170.1 Solanum lycopersicum HOM05D003761 ORTHO05D004412 7.8e-29 131.3 150 46.7
Ah.09g233900 Amaranthus hybridus HOM05D003761 ORTHO05D004412 1.0e-28 131.0 158 45.6
Peaxi162Scf00558g00515 Petunia axillaris HOM05D003761 ORTHO05D004412 1.7e-28 130.2 157 45.9
Cc09_g00350 Coffea canephora HOM05D003761 ORTHO05D004412 2.3e-28 129.8 157 48.4
Migut.M01442 Erythranthe guttata HOM05D003761 ORTHO05D004412 2.3e-28 129.8 183 42.1
PGR004G2813 Punica granatum HOM05D003761 ORTHO05D004412 2.9e-28 129.4 187 40.6
Nitab4.5_0000143g0280 Nicotiana tabacum HOM05D003761 ORTHO05D004412 3.9e-28 129.0 159 40.9
SalBow8G1906 Salvia bowleyana HOM05D003761 ORTHO05D004412 3.9e-28 129.0 162 46.9
CARHR223820 Cardamine hirsuta HOM05D003761 ORTHO05D004412 2.5e-27 126.3 163 45.4
SGA_v2.0_scaffold49G18223 Striga asiatica HOM05D003761 ORTHO05D004412 4.3e-27 125.6 170 42.4
Hma1.2p1_1175F.1_g263980 Hydrangea macrophylla HOM05D003761 ORTHO05D004412 7.3e-27 124.8 102 57.8
Carub.0004s2229 Capsella rubella HOM05D003761 ORTHO05D004412 3.6e-26 122.5 181 43.6
BcaB02g09051 Brassica carinata HOM05D003761 ORTHO05D004412 4.7e-26 122.1 171 42.7
Sp2g12340 Schrenkiella parvula HOM05D003761 ORTHO05D004412 1.4e-25 120.6 176 42.0
THA.LOC104806736 Tarenaya hassleriana HOM05D003761 ORTHO05D004412 1.8e-25 120.2 159 43.4
BcaB02g09050 Brassica carinata HOM05D003761 ORTHO05D004412 2.3e-25 119.8 172 43.0
AT4G17215 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 3.1e-25 119.4 135 46.7
BcaC06g31357 Brassica carinata HOM05D003761 ORTHO05D004412 3.1e-25 119.4 164 41.5
A06p44900 Brassica napus HOM05D003761 ORTHO05D004412 3.1e-25 119.4 169 41.4
Carub.0007s2420 Capsella rubella HOM05D003761 ORTHO05D004412 4.0e-25 119.0 135 46.7
SGA_v2.0_scaffold186G40120 Striga asiatica HOM05D003761 ORTHO05D004412 6.8e-25 118.2 169 42.6
ATR0827G170 Amborella trichopoda HOM05D003761 ORTHO05D004412 8.9e-25 117.9 177 42.9
AT5G47635 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 8.9e-25 117.9 176 40.3
Aa31LG2G12410 Aethionema arabicum HOM05D003761 ORTHO05D004412 1.2e-24 117.5 125 48.8
A05p06360 Brassica napus HOM05D003761 ORTHO05D004412 1.2e-24 117.5 172 41.9
AL8G10320 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 1.5e-24 117.1 176 39.8
BcaC04g21612 Brassica carinata HOM05D003761 ORTHO05D004412 1.5e-24 117.1 174 40.8
C09p29870 Brassica napus HOM05D003761 ORTHO05D004412 1.5e-24 117.1 174 40.8
BolC4t22355H Brassica oleracea HOM05D003761 ORTHO05D004412 1.5e-24 117.1 172 42.4
BraA05t19604Z Brassica rapa HOM05D003761 ORTHO05D004412 1.5e-24 117.1 172 41.9
A04p30050 Brassica napus HOM05D003761 ORTHO05D004412 2.0e-24 116.7 184 41.3
BraA06t27361Z Brassica rapa HOM05D003761 ORTHO05D004412 2.0e-24 116.7 169 40.8
Sopen11g007440 Solanum pennellii HOM05D003761 ORTHO05D004412 2.0e-24 116.7 170 42.9
BraA04t18501Z Brassica rapa HOM05D003761 ORTHO05D004412 3.4e-24 115.9 184 41.3
Solyc11g012705.2 Solanum lycopersicum HOM05D003761 ORTHO05D004412 3.4e-24 115.9 170 42.9
SGA_v2.0_scaffold7G03701 Striga asiatica HOM05D003761 ORTHO05D004412 3.4e-24 115.9 133 48.9
AL7G37500 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 4.4e-24 115.5 135 45.9
BcaB07g30768 Brassica carinata HOM05D003761 ORTHO05D004412 4.4e-24 115.5 140 44.3
BolC4t28284H Brassica oleracea HOM05D003761 ORTHO05D004412 5.8e-24 115.2 177 40.1
Os10g0206500 Oryza sativa ssp. japonica HOM05D003761 ORTHO05D004412 5.8e-24 115.2 179 38.0
BolC7t43669H Brassica oleracea HOM05D003761 ORTHO05D004412 9.8e-24 114.4 169 40.8
CARHR173680 Cardamine hirsuta HOM05D003761 ORTHO05D004412 9.8e-24 114.4 160 41.2
Thhalv10026465m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 9.8e-24 114.4 133 45.9
BcaNung03472 Brassica carinata HOM05D003761 ORTHO05D004412 1.7e-23 113.6 133 48.1
Carub.0008s0015 Capsella rubella HOM05D003761 ORTHO05D004412 1.7e-23 113.6 169 39.1
A09p23140 Brassica napus HOM05D003761 ORTHO05D004412 2.2e-23 113.2 167 40.1
BraA09t37917Z Brassica rapa HOM05D003761 ORTHO05D004412 2.2e-23 113.2 167 40.1
PGSC0003DMG400013298 Solanum tuberosum HOM05D003761 ORTHO05D004412 2.2e-23 113.2 170 41.8
AL4G37770 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 2.9e-23 112.8 185 41.1
Thhalv10017342m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 2.9e-23 112.8 135 45.2
BcaC02g07354 Brassica carinata HOM05D003761 ORTHO05D004412 3.7e-23 112.5 179 39.1
Nitab4.5_0001198g0070 Nicotiana tabacum HOM05D003761 ORTHO05D004412 3.7e-23 112.5 160 40.6
Thhalv10001056m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 4.9e-23 112.1 141 42.6
Aa31LG9G5380 Aethionema arabicum HOM05D003761 ORTHO05D004412 6.4e-23 111.7 176 39.2
BcaB06g29129 Brassica carinata HOM05D003761 ORTHO05D004412 6.4e-23 111.7 149 43.6
Sp4g22430 Schrenkiella parvula HOM05D003761 ORTHO05D004412 6.4e-23 111.7 184 40.8
BraA01t01941Z Brassica rapa HOM05D003761 ORTHO05D004412 8.3e-23 111.3 140 45.7
BcaC09g50449 Brassica carinata HOM05D003761 ORTHO05D004412 1.1e-22 110.9 133 46.6
C01p25300 Brassica napus HOM05D003761 ORTHO05D004412 1.1e-22 110.9 133 46.6
BolC1t02480H Brassica oleracea HOM05D003761 ORTHO05D004412 1.1e-22 110.9 133 46.6
Aa31LG5G19480 Aethionema arabicum HOM05D003761 ORTHO05D004412 1.4e-22 110.5 144 42.4
Peaxi162Scf00442g00073 Petunia axillaris HOM05D003761 ORTHO05D004412 2.4e-22 109.8 152 46.1
C07p31280 Brassica napus HOM05D003761 ORTHO05D004412 3.2e-22 109.4 177 40.1
Os10g0208600 Oryza sativa ssp. japonica HOM05D003761 ORTHO05D004412 3.2e-22 109.4 149 43.6
AT2G40113 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 9.2e-22 107.8 182 39.6
CAN.G1156.14 Capsicum annuum HOM05D003761 ORTHO05D004412 1.6e-21 107.1 165 41.8
unitig_52.g17560 Utricularia gibba HOM05D003761 ORTHO05D004412 2.0e-21 106.7 181 35.9
Sp7g16980 Schrenkiella parvula HOM05D003761 ORTHO05D004412 6.0e-21 105.1 133 43.6
CARHR135090 Cardamine hirsuta HOM05D003761 ORTHO05D004412 7.8e-21 104.8 138 44.2
HanXRQChr15g0470241 Helianthus annuus HOM05D003761 ORTHO05D004412 7.8e-21 104.8 141 45.4
A03p50350 Brassica napus HOM05D003761 ORTHO05D004412 1.0e-20 104.4 133 43.6
BraA03t14124Z Brassica rapa HOM05D003761 ORTHO05D004412 1.0e-20 104.4 133 43.6
BcaC06g33549 Brassica carinata HOM05D003761 ORTHO05D004412 1.7e-20 103.6 133 43.6
C07p48660 Brassica napus HOM05D003761 ORTHO05D004412 1.7e-20 103.6 133 43.6
BolC7t45373H Brassica oleracea HOM05D003761 ORTHO05D004412 1.7e-20 103.6 133 43.6
Zm00001eb050510 Zea mays HOM05D003761 ORTHO05D004412 1.7e-20 103.6 164 41.5
BcaNung03474 Brassica carinata HOM05D003761 ORTHO05D004412 3.0e-20 102.8 134 44.0
THA.LOC104798379 Tarenaya hassleriana HOM05D003761 ORTHO05D004412 5.0e-20 102.1 135 43.0
Cpa.g.sc27.234 Carica papaya HOM05D003761 ORTHO05D004412 1.9e-19 100.1 102 48.0
BcaNung00112 Brassica carinata HOM05D003761 ORTHO05D004412 2.5e-19 99.8 124 46.0
BcaC06g34236 Brassica carinata HOM05D003761 ORTHO05D004412 4.3e-19 99.0 163 38.0
Sc05g0009870 Simmondsia chinensis HOM05D003761 ORTHO05D004412 5.2e-17 92.0 104 46.2
BolC9t55850H Brassica oleracea HOM05D003761 ORTHO05D004412 1.3e-12 77.4 99 41.4
C04p67800 Brassica napus HOM05D003761 ORTHO05D004412 5.6e-11 72.0 92 41.3
Sed0005495 Sechium edule HOM05D003328 ORTHO05D003722 5.8e-08 62.0 133 31.6
SEGI_28043 Sequoiadendron giganteum HOM05D003761 ORTHO05D004412 2.9e-07 59.7 100 31.0
Glyma.19G035600 Glycine max HOM05D003328 ORTHO05D003722 1.1e-06 57.8 135 28.9
MBI19_g00148_MAGBIO Magnolia biondii HOM05D003328 ORTHO05D003722 3.2e-06 56.2 136 30.9
PGR042G0257 Punica granatum HOM05D003328 ORTHO05D003722 3.2e-06 56.2 147 29.3
Glyma.19G034900 Glycine max HOM05D003328 ORTHO05D003722 5.4e-06 55.5 135 28.9
RcHm_v2.0_Chr5g0000571 Rosa chinensis HOM05D003761 ORTHO05D004412 5.4e-06 55.5 65 53.8
Cpa.g.sc27.233 Carica papaya HOM05D003761 ORTHO05D004412 7.1e-06 55.1 50 52.0
Glyma.19G035700 Glycine max HOM05D003328 ORTHO05D003722 7.1e-06 55.1 132 28.0
Lj2g0016580 Lotus japonicus HOM05D003328 ORTHO05D003722 9.2e-06 54.7 136 27.2


User provided reference genes

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