Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 3.6e-103 378.3 189 100.0
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 6.8e-78 294.3 192 77.6
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 3.1e-75 285.4 189 74.6
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 2.7e-74 282.3 170 80.0
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 1.1e-72 276.9 183 74.3
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 2.5e-72 275.8 184 71.2
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 4.3e-72 275.0 190 71.1
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 1.6e-71 273.1 180 75.0
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 2.8e-71 272.3 179 74.3
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 4.7e-71 271.6 189 71.4
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 6.1e-71 271.2 178 75.8
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 3.1e-70 268.9 172 77.3
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 4.0e-70 268.5 175 75.4
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 8.9e-70 267.3 189 70.9
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 2.0e-69 266.2 170 75.9
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 2.6e-69 265.8 174 73.0
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 3.4e-69 265.4 168 78.0
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 7.5e-69 264.2 183 72.7
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 1.7e-68 263.1 189 68.3
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 1.7e-68 263.1 189 68.3
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 1.7e-68 263.1 183 72.1
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 1.7e-68 263.1 167 74.3
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 4.9e-68 261.5 189 69.3
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 1.1e-67 260.4 190 69.5
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 1.9e-67 259.6 174 71.3
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 1.9e-67 259.6 170 73.5
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 3.2e-67 258.8 183 68.9
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 5.4e-67 258.1 168 73.2
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 9.2e-67 257.3 174 71.3
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 9.2e-67 257.3 181 70.7
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 1.6e-66 256.5 176 72.2
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 2.0e-66 256.1 176 72.2
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 2.0e-66 256.1 176 70.5
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 2.7e-66 255.8 170 73.5
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 2.7e-66 255.8 170 72.4
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 6.0e-66 254.6 173 69.9
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 6.0e-66 254.6 189 64.6
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 6.0e-66 254.6 183 67.2
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 6.0e-66 254.6 176 71.0
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 7.8e-66 254.2 182 67.6
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 7.8e-66 254.2 178 67.4
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 7.8e-66 254.2 170 73.5
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 1.0e-65 253.8 170 70.6
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 1.3e-65 253.4 169 73.4
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 1.7e-65 253.1 170 71.8
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 1.7e-65 253.1 176 70.5
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 1.7e-65 253.1 170 71.8
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 2.3e-65 252.7 170 71.8
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 3.9e-65 251.9 182 67.0
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 2.5e-64 249.2 169 69.8
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 4.3e-64 248.4 190 65.3
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 5.6e-64 248.1 190 65.8
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 5.6e-64 248.1 182 65.9
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 7.3e-64 247.7 169 71.0
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 4.7e-63 245.0 176 68.2
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 1.1e-62 243.8 168 70.8
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 1.8e-62 243.0 166 70.5
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 1.8e-62 243.0 169 69.8
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 5.2e-62 241.5 169 69.2
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 6.8e-62 241.1 180 68.3
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 6.8e-62 241.1 167 71.3
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 2.0e-61 239.6 181 65.7
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 1.3e-60 236.9 176 68.8
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 2.2e-60 236.1 159 71.7
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 1.1e-59 233.8 170 69.4
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 1.1e-59 233.8 197 63.5
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 4.1e-59 231.9 159 70.4
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 7.0e-59 231.1 159 71.1
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 3.5e-58 228.8 159 70.4
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 4.6e-58 228.4 159 70.4
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 7.8e-58 227.6 187 63.1
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 5.6e-56 221.5 185 61.1
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 7.3e-56 221.1 156 69.9
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 2.8e-55 219.2 151 69.5
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 3.6e-55 218.8 177 60.5
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 6.2e-55 218.0 173 63.6
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 8.1e-55 217.6 258 47.7
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 1.8e-54 216.5 160 66.9
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 1.2e-53 213.8 139 74.1
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 1.2e-53 213.8 177 62.7
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 3.5e-50 202.2 162 61.1
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 1.7e-49 199.9 169 62.1
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 5.1e-49 198.4 163 61.3
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 3.6e-47 192.2 162 55.6
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 8.9e-46 187.6 129 72.1
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 1.2e-45 187.2 133 69.9
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 5.8e-45 184.9 159 56.6
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 7.6e-45 184.5 157 56.1
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 4.9e-44 181.8 189 49.7
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 1.3e-41 173.7 125 69.6
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 3.0e-41 172.6 155 59.4
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 1.9e-40 169.9 120 68.3
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 1.9e-40 169.9 168 52.4
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 4.3e-40 168.7 123 67.5
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 2.1e-39 166.4 133 61.7
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 6.9e-38 161.4 108 71.3
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 1.2e-37 160.6 108 71.3
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 4.4e-37 158.7 149 55.0
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 5.8e-37 158.3 135 60.0
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 1.4e-35 153.7 97 73.2
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 2.4e-35 152.9 118 61.0
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 1.2e-34 150.6 108 71.3
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 4.6e-34 148.7 163 50.3
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 1.3e-33 147.1 97 75.3
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 1.7e-33 146.7 88 78.4
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 8.7e-33 144.4 125 60.0
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 1.5e-32 143.7 102 68.6
Hma1.2p1_0443F.1_g154050 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 3.8e-28 129.0 75 84.0
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 2.4e-27 126.3 98 63.3
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 2.7e-26 122.9 133 54.9
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 3.5e-26 122.5 140 42.9
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 2.6e-21 106.3 123 48.8
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 1.4e-19 100.5 79 63.3
COL.COLO4_02059 Corchorus olitorius HOM05D007029 ORTHO05D008258 2.7e-18 96.3 155 32.9
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 1.5e-16 90.5 88 53.4
Hma1.2p1_0443F.1_g154060 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 7.4e-16 88.2 49 85.7
CDE07G1585 Ceratophyllum demersum HOM05D003168 ORTHO05D003590 2.2e-12 76.6 49 75.5
AT5G10605 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 2.2e-07 60.1 36 83.3


User provided reference genes

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