Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0847 Trochodendron aralioides HOM05D006458 ORTHO05D008433 2.0e-82 308.9 144 100.0
TAR629G1817 Trochodendron aralioides HOM05D006458 ORTHO05D008433 2.5e-64 248.8 142 80.3
Cfa020375 Carpinus fangiana HOM05D006458 ORTHO05D008433 6.1e-63 244.2 147 78.9
CSS0025826 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 3.0e-62 241.9 134 82.1
Sed0021211 Sechium edule HOM05D006458 ORTHO05D008433 5.2e-62 241.1 145 74.5
Potri.011G137100 Populus trichocarpa HOM05D006458 ORTHO05D008433 1.2e-61 240.0 142 78.2
CANSAT11G2101 Cannabis sativa HOM05D006458 ORTHO05D008433 5.7e-61 237.7 147 74.1
PSO541G1528 Papaver somniferum HOM05D006458 ORTHO05D008433 5.7e-61 237.7 144 77.1
Phvul.006G040400 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 9.8e-61 236.9 144 77.1
CiPaw.12G128400 Carya illinoinensis HOM05D006458 ORTHO05D008433 1.3e-60 236.5 145 78.6
Dinv22275 Davidia involucrata HOM05D006458 ORTHO05D008433 1.7e-60 236.1 142 74.6
Manes.03G125000 Manihot esculenta HOM05D006458 ORTHO05D008433 1.7e-60 236.1 141 76.6
PSO675G3423 Papaver somniferum HOM05D006458 ORTHO05D008433 1.7e-60 236.1 144 77.1
Ciclev10009738m.g Citrus clementina HOM05D006458 ORTHO05D008433 2.2e-60 235.7 150 74.0
Haze_09655 Corylus avellana HOM05D000653 ORTHO05D008581 2.8e-60 235.3 140 80.0
Prupe.4G210000 Prunus persica HOM05D006458 ORTHO05D008433 2.8e-60 235.3 145 76.6
VMungo0540G0475 Vigna mungo HOM05D006458 ORTHO05D008433 2.8e-60 235.3 144 76.4
Aqoxy2G01543 Aquilegia oxysepala HOM05D006458 ORTHO05D008433 3.7e-60 235.0 147 71.4
Phvul.005G120100 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 3.7e-60 235.0 143 76.2
Sabra16G0288000 Salix brachista HOM05D006458 ORTHO05D008433 4.9e-60 234.6 147 74.8
QL08p011516 Quercus lobata HOM05D006458 ORTHO05D008433 8.3e-60 233.8 145 74.5
GSVIVG01037612001 Vitis vinifera HOM05D006458 ORTHO05D008433 8.3e-60 233.8 129 82.2
Hma1.2p1_1271F.1_g271730 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 1.1e-59 233.4 137 74.5
CAN.G416.46 Capsicum annuum HOM05D006458 ORTHO05D008433 1.4e-59 233.0 143 74.8
Lj1A870G91 Lonicera japonica HOM05D006458 ORTHO05D008433 1.4e-59 233.0 147 72.8
MD03G1206100 Malus domestica HOM05D006458 ORTHO05D008433 1.4e-59 233.0 144 75.7
ClCG10G005510 Citrullus lanatus HOM05D006458 ORTHO05D008433 2.4e-59 232.3 142 73.9
Glyma.08G314400 Glycine max HOM05D006458 ORTHO05D008433 4.1e-59 231.5 146 76.7
Glyma.18G099800 Glycine max HOM05D006458 ORTHO05D008433 7.0e-59 230.7 145 75.9
MD11G1221600 Malus domestica HOM05D006458 ORTHO05D008433 9.2e-59 230.3 149 73.2
Sopen12g001140 Solanum pennellii HOM05D006458 ORTHO05D008433 9.2e-59 230.3 128 80.5
PGSC0003DMG400001097 Solanum tuberosum HOM05D006458 ORTHO05D008433 9.2e-59 230.3 128 81.2
FvH4_3g22360 Fragaria vesca HOM05D006458 ORTHO05D008433 1.2e-58 229.9 140 75.0
FAN11G3779 Fragaria x ananassa HOM05D006458 ORTHO05D008433 1.2e-58 229.9 140 75.0
arahy.Tifrunner.gnm1.ann1.717SVK Arachis hypogaea HOM05D006458 ORTHO05D008433 1.6e-58 229.6 145 74.5
Cc05_g13560 Coffea canephora HOM05D006458 ORTHO05D008433 2.0e-58 229.2 137 73.7
CsaV3_3G005240 Cucumis sativus L. HOM05D006458 ORTHO05D008433 2.0e-58 229.2 142 71.8
Solyc12g005150.2 Solanum lycopersicum HOM05D006458 ORTHO05D008433 2.0e-58 229.2 128 80.5
CSS0046732 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 2.7e-58 228.8 128 79.7
Lj6g0005932 Lotus japonicus HOM05D006458 ORTHO05D008433 3.5e-58 228.4 141 75.9
Ca_14717_v3 Cicer arietinum L. HOM05D006458 ORTHO05D008433 4.5e-58 228.0 145 74.5
Lalb_Chr15g0081001 Lupinus albus HOM05D006458 ORTHO05D008433 5.9e-58 227.6 141 75.2
MBI18_g24806_MAGBIO Magnolia biondii HOM05D006458 ORTHO05D008433 5.9e-58 227.6 145 75.2
Psat5g192520 Pisum sativum HOM05D006458 ORTHO05D008433 5.9e-58 227.6 142 73.2
arahy.Tifrunner.gnm1.ann1.JDXG8H Arachis hypogaea HOM05D006458 ORTHO05D008433 7.8e-58 227.3 145 73.8
Hma1.2p1_0673F.1_g201190 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 7.8e-58 227.3 145 72.4
TWI39G1057 Tripterygium wilfordii HOM05D006458 ORTHO05D008433 1.0e-57 226.9 143 73.4
SGA_v2.0_scaffold7G03986 Striga asiatica HOM05D006458 ORTHO05D008433 1.7e-57 226.1 132 75.8
Dinv40738 Davidia involucrata HOM05D000653 ORTHO05D008581 2.9e-57 225.3 133 76.7
Thecc.07G043100 Theobroma cacao HOM05D006458 ORTHO05D008433 2.9e-57 225.3 144 69.4
Duzib170G0083 Durio zibethinus HOM05D006458 ORTHO05D008433 5.0e-57 224.6 144 70.1
Duzib170G1029 Durio zibethinus HOM05D006458 ORTHO05D008433 5.0e-57 224.6 144 70.1
Gorai.013G160500 Gossypium raimondii HOM05D006458 ORTHO05D008433 6.6e-57 224.2 144 69.4
Nitab4.5_0000653g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 6.6e-57 224.2 149 69.1
Peaxi162Scf00450g00732 Petunia axillaris HOM05D006458 ORTHO05D008433 6.6e-57 224.2 144 72.9
Actinidia05107 Actinidia chinensis HOM05D006458 ORTHO05D008433 8.6e-57 223.8 123 81.3
FAN21G0544 Fragaria x ananassa HOM05D006458 ORTHO05D008433 1.1e-56 223.4 140 73.6
DCAR_010044 Daucus carota HOM05D006458 ORTHO05D008433 1.9e-56 222.6 142 69.7
Gohir.A13G138900 Gossypium hirsutum HOM05D006458 ORTHO05D008433 1.9e-56 222.6 144 68.8
Medtr3g051110 Medicago truncatula HOM05D006458 ORTHO05D008433 1.9e-56 222.6 144 75.0
Gohir.A01G078500 Gossypium hirsutum HOM05D006458 ORTHO05D008433 2.5e-56 222.2 142 70.4
HanXRQChr11g0336301 Helianthus annuus HOM05D006458 ORTHO05D008433 2.5e-56 222.2 144 70.1
RcHm_v2.0_Chr5g0038891 Rosa chinensis HOM05D006458 ORTHO05D008433 3.3e-56 221.9 142 72.5
Gorai.002G087500 Gossypium raimondii HOM05D006458 ORTHO05D008433 4.3e-56 221.5 142 69.7
SalBow5G1944 Salvia bowleyana HOM05D006458 ORTHO05D008433 4.3e-56 221.5 144 68.1
Gohir.D01G065600 Gossypium hirsutum HOM05D006458 ORTHO05D008433 5.6e-56 221.1 142 69.7
Duzib170G0736 Durio zibethinus HOM05D006458 ORTHO05D008433 7.3e-56 220.7 144 68.8
Migut.M01780 Erythranthe guttata HOM05D006458 ORTHO05D008433 9.5e-56 220.3 137 73.0
Nitab4.5_0000749g0130 Nicotiana tabacum HOM05D006458 ORTHO05D008433 9.5e-56 220.3 149 69.1
Nitab4.5_0004336g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.2e-55 219.9 143 72.0
Gohir.D13G143700 Gossypium hirsutum HOM05D006458 ORTHO05D008433 2.8e-55 218.8 144 68.1
Lsat_1_v5_gn_7_109420 Lactuca sativa HOM05D006458 ORTHO05D008433 2.8e-55 218.8 139 71.9
MSTRG.15157 Avicennia marina HOM05D006458 ORTHO05D008433 6.1e-55 217.6 147 67.3
Cpa.g.sc97.30 Carica papaya HOM05D006458 ORTHO05D008433 1.0e-54 216.9 138 73.2
Nitab4.5_0001604g0080 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.4e-54 216.5 130 74.6
vmacro09731 Vaccinium macrocarpon HOM05D006458 ORTHO05D008433 1.4e-54 216.5 174 60.9
PGR031G1917 Punica granatum HOM05D006458 ORTHO05D008433 2.3e-54 215.7 145 71.0
COL.COLO4_09642 Corchorus olitorius HOM05D000451 ORTHO05D008433 4.0e-54 214.9 126 74.6
AUR62015736 Chenopodium quinoa HOM05D006458 ORTHO05D008433 6.8e-54 214.2 132 72.7
AUR62020475 Chenopodium quinoa HOM05D006458 ORTHO05D008433 6.8e-54 214.2 132 72.7
Sp6g16820 Schrenkiella parvula HOM05D006458 ORTHO05D008433 1.2e-53 213.4 140 70.7
Zm00001eb178010 Zea mays HOM05D006458 ORTHO05D008433 2.0e-53 212.6 134 71.6
CDE05G1373 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 3.4e-53 211.8 139 68.3
Thhalv10014954m.g Eutrema salsugineum HOM05D006458 ORTHO05D008433 3.4e-53 211.8 142 68.3
BcaC04g20291 Brassica carinata HOM05D006458 ORTHO05D008433 7.5e-53 210.7 140 70.0
BcaB08g35852 Brassica carinata HOM05D006458 ORTHO05D008433 9.8e-53 210.3 140 70.0
Os02g0317800 Oryza sativa ssp. japonica HOM05D006458 ORTHO05D008433 9.8e-53 210.3 130 72.3
THA.LOC104817659 Tarenaya hassleriana HOM05D006458 ORTHO05D008433 1.7e-52 209.5 143 67.8
ATR0752G141 Amborella trichopoda HOM05D006458 ORTHO05D008433 2.2e-52 209.1 137 70.1
CARHR268190 Cardamine hirsuta HOM05D006458 ORTHO05D008433 2.2e-52 209.1 138 71.0
CDE02G3449 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 2.9e-52 208.8 135 70.4
BraA10t43315Z Brassica rapa HOM05D006458 ORTHO05D008433 3.7e-52 208.4 140 69.3
EL10Ac4g07850 Beta vulgaris HOM05D006458 ORTHO05D008433 8.3e-52 207.2 132 71.2
AL8G30300 Arabidopsis lyrata HOM05D006458 ORTHO05D008433 1.1e-51 206.8 143 67.1
AT5G54855 Arabidopsis thaliana HOM05D006458 ORTHO05D008433 1.1e-51 206.8 143 67.1
Ah.04g165770 Amaranthus hybridus HOM05D006458 ORTHO05D008433 1.4e-51 206.5 137 67.9
A10p12190 Brassica napus HOM05D006458 ORTHO05D008433 1.4e-51 206.5 140 68.6
Aa31LG3G10770 Aethionema arabicum HOM05D006458 ORTHO05D008433 3.2e-51 205.3 138 68.8
Carub.0008s1515 Capsella rubella HOM05D006458 ORTHO05D008433 3.2e-51 205.3 143 67.1
Nn1g03576 Nelumbo nucifera HOM05D006458 ORTHO05D008433 3.2e-51 205.3 123 75.6
Sc03g0008720 Simmondsia chinensis HOM05D006458 ORTHO05D008433 7.0e-51 204.1 126 73.0
RhsimUnG0251700 Rhododendron simsii HOM05D006458 ORTHO05D008433 1.2e-50 203.4 203 51.7
SalBow7G4274 Salvia bowleyana HOM05D006458 ORTHO05D008433 2.7e-50 202.2 168 57.1
C09p45410 Brassica napus HOM05D006458 ORTHO05D008433 7.8e-50 200.7 141 68.1
CSS0035522 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 1.1e-48 196.8 112 82.1
Hund02079 Selenicereus undatus HOM05D006458 ORTHO05D008433 3.3e-48 195.3 136 67.6
HPP92_005293 Vanilla planifolia HOM05D006458 ORTHO05D008433 7.3e-48 194.1 136 65.4
unitig_8.g4602 Utricularia gibba HOM05D006458 ORTHO05D008433 1.6e-47 193.0 130 66.2
Sabra11G0123000 Salix brachista HOM05D006458 ORTHO05D008433 8.9e-46 187.2 158 59.5
MELO3C031911.2 Cucumis melo HOM05D006458 ORTHO05D008433 5.6e-40 167.9 101 75.2
ECA236G2465 Erigeron canadensis HOM05D000653 ORTHO05D008581 5.6e-40 167.9 108 70.4
Oeu062597.2 Olea europaea HOM05D006458 ORTHO05D008433 6.2e-39 164.5 94 77.7
Eucgr.F03456 Eucalyptus grandis HOM05D006458 ORTHO05D008433 7.5e-37 157.5 93 75.3
SalBow7G3069 Salvia bowleyana HOM05D006458 ORTHO05D008433 7.5e-37 157.5 96 72.9
SEGI_29279 Sequoiadendron giganteum HOM05D006458 ORTHO05D008433 1.7e-33 146.4 106 66.0
Nitab4.5_0000296g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 3.0e-33 145.6 97 68.0
Atru.chr2.3327 Acer truncatum HOM05D006458 ORTHO05D008433 3.3e-32 142.1 96 69.8
AUR62029374 Chenopodium quinoa HOM05D001363 ORTHO05D006255 1.4e-19 100.1 110 50.9
Atru.chr2.3388 Acer truncatum HOM05D006458 ORTHO05D008433 2.1e-18 96.3 66 72.7
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 1.7e-12 76.6 43 72.1
RcHm_v2.0_Chr5g0038871 Rosa chinensis HOM05D006458 ORTHO05D008433 8.4e-12 74.3 49 65.3
TPR.G13209 Trifolium pratense HOM05D006458 ORTHO05D008433 8.4e-12 74.3 49 65.3
FAN25G2931 Fragaria x ananassa HOM05D006458 ORTHO05D008433 7.4e-08 61.2 35 85.7
MD13G1229600 Malus domestica HOM05D006458 ORTHO05D245398 6.2e-07 58.2 53 56.6
Nitab4.5_0000286g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 5.3e-06 55.1 52 53.8


User provided reference genes

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