Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0742 Trochodendron aralioides HOM05D005265 ORTHO05D006326 3.0e-64 248.4 131 100.0
TAR626G0103 Trochodendron aralioides HOM05D005265 ORTHO05D006326 1.5e-63 246.1 131 99.2
TAR624G1044 Trochodendron aralioides HOM05D005265 ORTHO05D006326 1.3e-56 223.0 131 90.8
GSVIVG01021584001 Vitis vinifera HOM05D005265 ORTHO05D006326 4.7e-54 214.5 131 85.5
Gohir.D02G238400 Gossypium hirsutum HOM05D005265 ORTHO05D006326 8.1e-54 213.8 131 83.2
Gorai.005G266900 Gossypium raimondii HOM05D005265 ORTHO05D006326 8.1e-54 213.8 131 83.2
Prupe.4G088200 Prunus persica HOM05D005265 ORTHO05D006326 2.3e-53 212.2 131 83.2
Dinv15893 Davidia involucrata HOM05D005265 ORTHO05D006326 3.1e-53 211.8 132 86.4
FAN16G0550 Fragaria x ananassa HOM05D005265 ORTHO05D006326 6.8e-53 210.7 131 84.0
Gohir.A03G216800 Gossypium hirsutum HOM05D005265 ORTHO05D006326 6.8e-53 210.7 131 82.4
CANSAT35G0137 Cannabis sativa HOM05D005265 ORTHO05D006326 8.9e-53 210.3 131 84.0
MD00G1109700 Malus domestica HOM05D005265 ORTHO05D006326 8.9e-53 210.3 131 81.7
Nitab4.5_0002991g0030 Nicotiana tabacum HOM05D005265 ORTHO05D006326 8.9e-53 210.3 130 85.4
Nitab4.5_0003368g0030 Nicotiana tabacum HOM05D005265 ORTHO05D006326 8.9e-53 210.3 130 84.6
RcHm_v2.0_Chr5g0015361 Rosa chinensis HOM05D005265 ORTHO05D006326 8.9e-53 210.3 131 84.0
FAN25G1721 Fragaria x ananassa HOM05D005265 ORTHO05D006326 1.2e-52 209.9 131 84.0
Cpa.g.sc17.68 Carica papaya HOM05D005265 ORTHO05D006326 7.6e-52 207.2 131 84.0
Dinv32199 Davidia involucrata HOM05D005265 ORTHO05D006326 7.6e-52 207.2 132 84.1
FvH4_3g09680 Fragaria vesca HOM05D005265 ORTHO05D006326 7.6e-52 207.2 131 82.4
FAN11G2263 Fragaria x ananassa HOM05D005265 ORTHO05D006326 7.6e-52 207.2 131 82.4
Lj1g0015817 Lotus japonicus HOM05D005265 ORTHO05D006326 9.9e-52 206.8 131 83.2
Duzib132G0868 Durio zibethinus HOM05D005265 ORTHO05D006326 1.3e-51 206.5 129 82.2
Thecc.02G010800 Theobroma cacao HOM05D005265 ORTHO05D006326 1.3e-51 206.5 129 81.4
CiPaw.09G117100 Carya illinoinensis HOM05D005265 ORTHO05D006326 2.2e-51 205.7 131 83.2
Oeu040090.1 Olea europaea HOM05D005265 ORTHO05D006326 2.2e-51 205.7 132 84.1
Migut.M01877 Erythranthe guttata HOM05D005265 ORTHO05D006326 4.9e-51 204.5 132 82.6
CiPaw.10G086700 Carya illinoinensis HOM05D005265 ORTHO05D006326 6.4e-51 204.1 131 82.4
CSS0007721 Camellia sinensis var. sinensis HOM05D005265 ORTHO05D006326 1.1e-50 203.4 133 82.0
CSS0016265 Camellia sinensis var. sinensis HOM05D005265 ORTHO05D006326 1.1e-50 203.4 133 82.0
COL.COLO4_17668 Corchorus olitorius HOM05D005265 ORTHO05D006326 1.1e-50 203.4 129 79.1
Nitab4.5_0001809g0020 Nicotiana tabacum HOM05D005265 ORTHO05D006326 1.1e-50 203.4 130 82.3
Aqoxy4G00026 Aquilegia oxysepala HOM05D005265 ORTHO05D006326 1.4e-50 203.0 136 78.7
HanXRQChr04g0113581 Helianthus annuus HOM05D005265 ORTHO05D006326 1.9e-50 202.6 132 81.1
EL10Ac7g15766 Beta vulgaris HOM05D005265 ORTHO05D006326 2.4e-50 202.2 129 79.8
Nitab4.5_0000100g0280 Nicotiana tabacum HOM05D005265 ORTHO05D006326 2.4e-50 202.2 132 81.8
PGR083G1323 Punica granatum HOM05D005265 ORTHO05D006326 2.4e-50 202.2 131 80.9
Haze_05746 Corylus avellana HOM05D005265 ORTHO05D006326 3.2e-50 201.8 132 81.8
Duzib248G0887 Durio zibethinus HOM05D005265 ORTHO05D006326 3.2e-50 201.8 126 83.3
Phvul.009G216400 Phaseolus vulgaris HOM05D005265 ORTHO05D006326 3.2e-50 201.8 129 80.6
DCAR_004804 Daucus carota HOM05D005265 ORTHO05D006326 4.1e-50 201.4 132 82.6
PSO541G2745 Papaver somniferum HOM05D005265 ORTHO05D006326 4.1e-50 201.4 130 78.5
PSO675G1042 Papaver somniferum HOM05D005265 ORTHO05D006326 4.1e-50 201.4 130 78.5
Sc24g0001600 Simmondsia chinensis HOM05D005265 ORTHO05D006326 4.1e-50 201.4 130 81.5
arahy.Tifrunner.gnm1.ann1.9042LP Arachis hypogaea HOM05D005265 ORTHO05D006326 5.4e-50 201.1 129 79.8
Peaxi162Scf00045g02242 Petunia axillaris HOM05D005265 ORTHO05D006326 5.4e-50 201.1 131 83.2
Hma1.2p1_0689F.1_g203690 Hydrangea macrophylla HOM05D005265 ORTHO05D006326 7.1e-50 200.7 130 80.0
Hma1.2p1_1418F.1_g282220 Hydrangea macrophylla HOM05D005265 ORTHO05D006326 7.1e-50 200.7 130 80.0
THA.LOC104814318 Tarenaya hassleriana HOM05D005265 ORTHO05D006326 7.1e-50 200.7 131 80.9
MD05G1276100 Malus domestica HOM05D005265 ORTHO05D006326 9.2e-50 200.3 136 77.2
Ciclev10017170m.g Citrus clementina HOM05D005265 ORTHO05D006326 1.2e-49 199.9 128 80.5
Glyma.15G194300 Glycine max HOM05D005265 ORTHO05D006326 1.2e-49 199.9 131 80.9
Manes.14G134800 Manihot esculenta HOM05D005265 ORTHO05D006326 1.2e-49 199.9 131 79.4
Potri.006G254200 Populus trichocarpa HOM05D005265 ORTHO05D006326 1.2e-49 199.9 127 83.5
Sopen08g002900 Solanum pennellii HOM05D005265 ORTHO05D006326 1.2e-49 199.9 130 79.2
PGSC0003DMG400020505 Solanum tuberosum HOM05D005265 ORTHO05D006326 1.2e-49 199.9 130 80.0
VMungo1309G1099 Vigna mungo HOM05D005265 ORTHO05D006326 1.2e-49 199.9 129 79.1
Phvul.002G140800 Phaseolus vulgaris HOM05D005265 ORTHO05D006326 1.6e-49 199.5 129 79.8
arahy.Tifrunner.gnm1.ann1.ZS1M1K Arachis hypogaea HOM05D005265 ORTHO05D006326 2.1e-49 199.1 129 79.1
DCAR_004805 Daucus carota HOM05D005265 ORTHO05D006326 2.7e-49 198.7 132 82.6
Sabra18G0029900 Salix brachista HOM05D005265 ORTHO05D006326 2.7e-49 198.7 130 80.8
Solyc08g006930.3 Solanum lycopersicum HOM05D005265 ORTHO05D006326 2.7e-49 198.7 130 78.5
CAN.G1882.1 Capsicum annuum HOM05D005265 ORTHO05D006326 3.5e-49 198.4 130 79.2
Cfa000859 Carpinus fangiana HOM05D005265 ORTHO05D006326 3.5e-49 198.4 132 80.3
Eucgr.D00234 Eucalyptus grandis HOM05D005265 ORTHO05D006326 3.5e-49 198.4 132 81.1
SalBow8G5437 Salvia bowleyana HOM05D005265 ORTHO05D006326 3.5e-49 198.4 130 79.2
Manes.06G061100 Manihot esculenta HOM05D005265 ORTHO05D006326 4.6e-49 198.0 131 77.9
Potri.018G027600 Populus trichocarpa HOM05D005265 ORTHO05D006326 4.6e-49 198.0 130 80.8
MSTRG.7528 Avicennia marina HOM05D005265 ORTHO05D006326 6.0e-49 197.6 132 78.8
Cc09_g08490 Coffea canephora HOM05D005265 ORTHO05D006326 6.0e-49 197.6 132 79.5
AUR62038135 Chenopodium quinoa HOM05D005265 ORTHO05D006326 1.0e-48 196.8 130 80.8
Glyma.09G087700 Glycine max HOM05D005265 ORTHO05D006326 1.3e-48 196.4 128 81.2
Duzib052G0655 Durio zibethinus HOM05D005265 ORTHO05D006326 1.7e-48 196.1 130 78.5
Lalb_Chr08g0233241 Lupinus albus HOM05D005265 ORTHO05D006326 1.7e-48 196.1 131 77.9
QL05p054070 Quercus lobata HOM05D005265 ORTHO05D006326 2.3e-48 195.7 131 79.4
unitig_61.g26080 Utricularia gibba HOM05D005265 ORTHO05D006326 2.3e-48 195.7 132 78.8
Ca_12734_v3 Cicer arietinum L. HOM05D005265 ORTHO05D006326 6.6e-48 194.1 132 78.8
Ca_12740_v3 Cicer arietinum L. HOM05D005265 ORTHO05D006326 6.6e-48 194.1 132 78.8
ECA236G4370 Erigeron canadensis HOM05D005265 ORTHO05D006326 6.6e-48 194.1 134 79.9
MBI02_g44634_MAGBIO Magnolia biondii HOM05D005265 ORTHO05D006326 6.6e-48 194.1 130 76.9
CDE01G0641 Ceratophyllum demersum HOM05D005265 ORTHO05D006326 8.6e-48 193.7 130 73.8
MBI02_g40641_MAGBIO Magnolia biondii HOM05D005265 ORTHO05D006326 8.6e-48 193.7 130 76.9
THA.LOC104812683 Tarenaya hassleriana HOM05D005265 ORTHO05D006326 8.6e-48 193.7 132 80.3
CARHR029770 Cardamine hirsuta HOM05D005265 ORTHO05D006326 1.5e-47 193.0 130 78.5
CDE12G0489 Ceratophyllum demersum HOM05D005265 ORTHO05D006326 1.5e-47 193.0 130 73.1
AT1G30380 Arabidopsis thaliana HOM05D005265 ORTHO05D006326 1.9e-47 192.6 130 77.7
ClCG01G025030 Citrullus lanatus HOM05D005265 ORTHO05D006326 1.9e-47 192.6 130 78.5
Sp1g26220 Schrenkiella parvula HOM05D005265 ORTHO05D006326 1.9e-47 192.6 132 79.5
AUR62009823 Chenopodium quinoa HOM05D005265 ORTHO05D006326 3.3e-47 191.8 130 78.5
BcaC01g00188 Brassica carinata HOM05D005265 ORTHO05D006326 4.3e-47 191.4 132 78.8
A08p24490 Brassica napus HOM05D005265 ORTHO05D006326 4.3e-47 191.4 132 78.8
C03p76720 Brassica napus HOM05D005265 ORTHO05D006326 4.3e-47 191.4 132 78.8
BraA08t34405Z Brassica rapa HOM05D005265 ORTHO05D006326 4.3e-47 191.4 132 78.8
SGA_v2.0_scaffold223G42844 Striga asiatica HOM05D005265 ORTHO05D006326 4.3e-47 191.4 132 79.5
BcaB03g12211 Brassica carinata HOM05D005265 ORTHO05D006326 7.3e-47 190.7 130 77.7
Sed0012654 Sechium edule HOM05D005265 ORTHO05D006326 7.3e-47 190.7 130 79.2
Atru.chr10.966 Acer truncatum HOM05D005265 ORTHO05D006326 1.2e-46 189.9 129 77.5
Actinidia13436 Actinidia chinensis HOM05D005265 ORTHO05D006326 1.2e-46 189.9 131 78.6
Ah.08g216220 Amaranthus hybridus HOM05D000506 ORTHO05D000369 1.6e-46 189.5 122 78.7
HanXRQChr15g0481551 Helianthus annuus HOM05D005265 ORTHO05D006326 1.6e-46 189.5 134 77.6
TWI09G0405 Tripterygium wilfordii HOM05D005265 ORTHO05D006326 1.6e-46 189.5 133 77.4
vmacro03415 Vaccinium macrocarpon HOM05D005265 ORTHO05D006326 1.6e-46 189.5 129 77.5
Medtr1g026820 Medicago truncatula HOM05D005265 ORTHO05D006326 2.1e-46 189.1 124 78.2
BraA09t39132Z Brassica rapa HOM05D005265 ORTHO05D006326 2.8e-46 188.7 133 78.9
BcaB07g32648 Brassica carinata HOM05D005265 ORTHO05D006326 4.7e-46 188.0 133 76.7
BcaC05g27071 Brassica carinata HOM05D005265 ORTHO05D006326 8.1e-46 187.2 133 78.2
A09p36080 Brassica napus HOM05D005265 ORTHO05D006326 8.1e-46 187.2 133 78.2
C05p29330 Brassica napus HOM05D005265 ORTHO05D006326 8.1e-46 187.2 133 78.2
BolC3t19927H Brassica oleracea HOM05D005265 ORTHO05D006326 8.1e-46 187.2 129 76.0
BolC5t31665H Brassica oleracea HOM05D005265 ORTHO05D006326 8.1e-46 187.2 133 78.2
TWI73G0862 Tripterygium wilfordii HOM05D005265 ORTHO05D006326 1.1e-45 186.8 133 76.7
AL1G44320 Arabidopsis lyrata HOM05D005265 ORTHO05D006326 1.4e-45 186.4 133 77.4
Carub.0001s2858 Capsella rubella HOM05D005265 ORTHO05D006326 1.4e-45 186.4 132 78.8
CsaV3_6G052210 Cucumis sativus L. HOM05D005265 ORTHO05D006326 1.8e-45 186.0 133 77.4
Aa31LG6G5400 Aethionema arabicum HOM05D005265 ORTHO05D006326 2.4e-45 185.7 133 77.4
Thhalv10009090m.g Eutrema salsugineum HOM05D005265 ORTHO05D006326 2.4e-45 185.7 133 77.4
FAN21G2293 Fragaria x ananassa HOM05D005265 ORTHO05D006326 5.2e-45 184.5 179 60.9
TPR.G24497 Trifolium pratense HOM05D005265 ORTHO05D006326 6.8e-45 184.1 132 73.5
MELO3C007091.2 Cucumis melo HOM05D005265 ORTHO05D006326 8.9e-45 183.7 130 76.9
Actinidia33666 Actinidia chinensis HOM05D005265 ORTHO05D006326 1.2e-44 183.3 131 76.3
ATR0681G400 Amborella trichopoda HOM05D005265 ORTHO05D006326 1.5e-44 183.0 129 73.6
Lsat_1_v5_gn_7_32001 Lactuca sativa HOM05D005265 ORTHO05D006326 7.6e-44 180.6 132 75.8
Sed0026922 Sechium edule HOM05D005265 ORTHO05D006326 7.6e-44 180.6 131 75.6
Hund18717 Selenicereus undatus HOM05D005265 ORTHO05D006326 1.3e-43 179.9 136 72.8
Rhsim13G0119400 Rhododendron simsii HOM05D005265 ORTHO05D006326 3.2e-42 175.3 104 85.6
Lalb_Chr23g0275991 Lupinus albus HOM05D005265 ORTHO05D006326 5.4e-42 174.5 103 85.4
HPP92_019500 Vanilla planifolia HOM05D005265 ORTHO05D006326 7.1e-42 174.1 130 72.3
Psat0s1315g0080 Pisum sativum HOM05D005265 ORTHO05D006326 3.0e-40 168.7 156 60.3
Os07g0148900 Oryza sativa ssp. japonica HOM05D005265 ORTHO05D006326 6.6e-40 167.5 123 70.7
Mapoly0125s0033 Marchantia polymorpha HOM05D005265 ORTHO05D006326 9.6e-39 163.7 127 69.3
Zm00001eb299990 Zea mays HOM05D005265 ORTHO05D006326 1.1e-37 160.2 128 64.1
SEGI_05857 Sequoiadendron giganteum HOM05D005265 ORTHO05D006326 1.8e-37 159.5 131 64.1
Pp3c13_10540 Physcomitrium patens HOM05D005265 ORTHO05D006326 3.1e-37 158.7 126 67.5
Pp3c3_10740 Physcomitrium patens HOM05D005265 ORTHO05D006326 1.5e-36 156.4 125 65.6
Sp4g16930 Schrenkiella parvula HOM05D005265 ORTHO05D006326 2.9e-35 152.1 128 64.1
Nn3g20272 Nelumbo nucifera HOM05D005265 ORTHO05D006326 4.9e-35 151.4 124 68.5
Nn4g26654 Nelumbo nucifera HOM05D005265 ORTHO05D006326 8.4e-35 150.6 125 68.0
Pp3c13_10520 Physcomitrium patens HOM05D005265 ORTHO05D006326 8.1e-30 134.0 85 77.6
AagrBONN_evm.TU.Sc2ySwM_369.184 Anthoceros agrestis HOM05D005265 ORTHO05D006326 1.4e-29 133.3 128 60.2
CBR_g39729 Chara braunii HOM05D005265 ORTHO05D006326 5.5e-26 121.3 134 50.7
SMO358G0410 Selaginella moellendorffii HOM05D005265 ORTHO05D006326 2.3e-24 115.9 78 75.6
Nn8g40769 Nelumbo nucifera HOM05D005265 ORTHO05D006326 6.9e-21 104.4 61 83.6
Cre17.g724300 Chlamydomonas reinhardtii HOM05D005265 ORTHO05D006326 5.5e-18 94.7 105 49.5
RcHm_v2.0_Chr5g0036151 Rosa chinensis HOM05D005265 ORTHO05D006326 9.0e-13 77.4 48 81.2
PRCOL_00005455 Prasinoderma coloniale HOM05D005265 ORTHO05D006326 3.0e-08 62.4 91 41.8
MCO04G068 Micromonas commoda HOM05D005265 ORTHO05D006326 5.1e-08 61.6 125 36.0


User provided reference genes

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