Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0713 Trochodendron aralioides HOM05D000047 ORTHO05D001383 6.4e-54 213.8 104 100.0
Thecc.01G147000 Theobroma cacao HOM05D000047 ORTHO05D001383 3.2e-13 78.6 51 70.6
TWI12G0387 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.6e-12 76.3 51 70.6
TWI18G1375 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.6e-12 76.3 51 70.6
Sopen06g013120 Solanum pennellii HOM05D000047 ORTHO05D001383 2.1e-12 75.9 54 63.0
FvH4_4g01161 Fragaria vesca HOM05D000047 ORTHO05D001383 4.6e-12 74.7 67 52.2
Sopen01g018380 Solanum pennellii HOM05D000047 ORTHO05D001383 4.6e-12 74.7 54 61.1
Sopen02g008560 Solanum pennellii HOM05D000047 ORTHO05D000044 4.6e-12 74.7 54 63.0
Sopen04g011740 Solanum pennellii HOM05D000047 ORTHO05D000044 6.1e-12 74.3 54 61.1
Sopen04g012780 Solanum pennellii HOM05D000047 ORTHO05D001383 6.1e-12 74.3 54 61.1
Sopen05g020260 Solanum pennellii HOM05D000047 ORTHO05D000044 6.1e-12 74.3 54 61.1
Sopen09g021660 Solanum pennellii HOM05D000004 ORTHO05D000002 6.1e-12 74.3 54 61.1
Sopen01g006520 Solanum pennellii HOM05D000047 ORTHO05D001383 7.9e-12 73.9 54 61.1
Sopen01g018560 Solanum pennellii HOM05D000047 ORTHO05D001383 7.9e-12 73.9 54 61.1
Sopen02g010170 Solanum pennellii HOM05D000047 ORTHO05D001383 7.9e-12 73.9 54 61.1
Sopen03g014800 Solanum pennellii HOM05D000047 ORTHO05D000044 7.9e-12 73.9 54 61.1
Sopen03g021380 Solanum pennellii HOM05D000047 ORTHO05D000044 7.9e-12 73.9 54 61.1
Sopen04g021500 Solanum pennellii HOM05D000047 ORTHO05D001383 7.9e-12 73.9 54 61.1
Sopen05g018330 Solanum pennellii HOM05D000047 ORTHO05D000044 7.9e-12 73.9 54 61.1
Sopen06g006890 Solanum pennellii HOM05D000047 ORTHO05D001383 7.9e-12 73.9 54 61.1
Sopen06g009330 Solanum pennellii HOM05D000047 ORTHO05D000044 7.9e-12 73.9 54 61.1
Sopen07g020380 Solanum pennellii HOM05D000047 ORTHO05D001383 7.9e-12 73.9 54 61.1
Sopen08g008120 Solanum pennellii HOM05D000047 ORTHO05D000044 7.9e-12 73.9 54 61.1
Sopen09g012580 Solanum pennellii HOM05D000047 ORTHO05D001383 7.9e-12 73.9 54 61.1
Sopen09g022170 Solanum pennellii HOM05D000047 ORTHO05D001383 7.9e-12 73.9 54 61.1
Sopen10g013080 Solanum pennellii HOM05D000047 ORTHO05D001383 7.9e-12 73.9 54 61.1
Sopen10g021270 Solanum pennellii HOM05D000047 ORTHO05D001383 7.9e-12 73.9 54 61.1
Sopen11g023890 Solanum pennellii HOM05D000047 ORTHO05D000044 7.9e-12 73.9 54 61.1
Sopen12g025220 Solanum pennellii HOM05D000047 ORTHO05D001383 7.9e-12 73.9 54 61.1
Hund05696 Selenicereus undatus HOM05D000070 ORTHO05D001383 1.0e-11 73.6 54 64.8
Hund05906 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.0e-11 73.6 54 64.8
Sopen01g008330 Solanum pennellii HOM05D000047 ORTHO05D001383 1.0e-11 73.6 54 61.1
Sopen04g024170 Solanum pennellii HOM05D000047 ORTHO05D001383 1.0e-11 73.6 54 59.3
Sopen06g011440 Solanum pennellii HOM05D000047 ORTHO05D000044 1.0e-11 73.6 54 61.1
Sopen10g010190 Solanum pennellii HOM05D000047 ORTHO05D001383 1.0e-11 73.6 55 60.0
Sopen02g009500 Solanum pennellii HOM05D000047 ORTHO05D001383 1.4e-11 73.2 54 61.1
Sopen10g018840 Solanum pennellii HOM05D000047 ORTHO05D001383 1.8e-11 72.8 54 59.3
Sopen05g008560 Solanum pennellii HOM05D000047 ORTHO05D001383 2.3e-11 72.4 54 59.3
Sopen09g024060 Solanum pennellii HOM05D000047 ORTHO05D001383 2.3e-11 72.4 54 59.3
CAN.G1076.14 Capsicum annuum HOM05D000152 ORTHO05D001383 3.0e-11 72.0 54 59.3
Hund10359 Selenicereus undatus HOM05D000047 ORTHO05D001383 3.0e-11 72.0 54 63.0
Sopen07g025200 Solanum pennellii HOM05D000047 ORTHO05D001383 3.0e-11 72.0 54 61.1
Sopen12g012050 Solanum pennellii HOM05D000047 ORTHO05D001383 3.0e-11 72.0 54 59.3
Sopen01g019760 Solanum pennellii HOM05D000047 ORTHO05D000044 3.9e-11 71.6 54 59.3
Sopen07g006060 Solanum pennellii HOM05D000047 ORTHO05D000044 3.9e-11 71.6 54 59.3
Sed0008905 Sechium edule HOM05D000047 ORTHO05D001383 5.1e-11 71.2 54 63.0
Hund13352 Selenicereus undatus HOM05D000023 ORTHO05D001383 5.1e-11 71.2 63 55.6
Sopen01g017640 Solanum pennellii HOM05D000047 ORTHO05D001383 5.1e-11 71.2 53 58.5
Sopen08g010280 Solanum pennellii HOM05D000047 ORTHO05D001383 6.7e-11 70.9 54 57.4
Sopen10g027330 Solanum pennellii HOM05D000047 ORTHO05D001383 6.7e-11 70.9 54 59.3
Sopen11g011000 Solanum pennellii HOM05D000047 ORTHO05D001383 6.7e-11 70.9 52 59.6
FvH4_6g13112 Fragaria vesca HOM05D000047 ORTHO05D001383 8.8e-11 70.5 54 63.0
FvH4_6g53791 Fragaria vesca HOM05D000047 ORTHO05D001383 8.8e-11 70.5 88 42.0
Potri.001G433100 Populus trichocarpa HOM05D000047 ORTHO05D001383 8.8e-11 70.5 54 61.1
Sopen04g022080 Solanum pennellii HOM05D000047 ORTHO05D001383 8.8e-11 70.5 54 59.3
Sopen06g006810 Solanum pennellii HOM05D000047 ORTHO05D001383 8.8e-11 70.5 54 57.4
Sopen10g015700 Solanum pennellii HOM05D000047 ORTHO05D001383 8.8e-11 70.5 45 68.9
Sopen02g008570 Solanum pennellii HOM05D000047 ORTHO05D001383 1.1e-10 70.1 54 59.3
Sopen05g013390 Solanum pennellii HOM05D000047 ORTHO05D001383 1.1e-10 70.1 54 57.4
Hund09920 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.5e-10 69.7 51 62.7
Sopen05g010090 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-10 69.7 53 56.6
Sopen08g015290 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-10 69.7 54 57.4
ClCG09G014950 Citrullus lanatus HOM05D000047 ORTHO05D001383 2.0e-10 69.3 87 48.3
Potri.001G184575 Populus trichocarpa HOM05D000047 ORTHO05D001383 2.0e-10 69.3 54 61.1
Sopen02g008270 Solanum pennellii HOM05D000047 ORTHO05D000044 2.0e-10 69.3 54 57.4
Sopen04g018110 Solanum pennellii HOM05D000047 ORTHO05D001383 2.0e-10 69.3 54 59.3
QL07p033814 Quercus lobata HOM05D000047 ORTHO05D000044 2.5e-10 68.9 54 61.1
Sopen03g018790 Solanum pennellii HOM05D000047 ORTHO05D001383 2.5e-10 68.9 54 59.3
Sopen10g007420 Solanum pennellii HOM05D000047 ORTHO05D001383 2.5e-10 68.9 54 59.3
Sopen11g019170 Solanum pennellii HOM05D000047 ORTHO05D001383 3.3e-10 68.6 54 57.4
PGSC0003DMG400038224 Solanum tuberosum HOM05D000047 ORTHO05D001383 3.3e-10 68.6 51 60.8
Hund14969 Selenicereus undatus HOM05D000047 ORTHO05D001383 4.3e-10 68.2 54 57.4
Sopen08g019000 Solanum pennellii HOM05D000047 ORTHO05D001383 5.7e-10 67.8 48 60.4
Sopen09g008960 Solanum pennellii HOM05D000047 ORTHO05D001383 5.7e-10 67.8 54 55.6
FvH4_2g15191 Fragaria vesca HOM05D000047 ORTHO05D001383 7.4e-10 67.4 54 61.1
Potri.010G156001 Populus trichocarpa HOM05D000047 ORTHO05D001383 7.4e-10 67.4 54 57.4
Potri.018G011950 Populus trichocarpa HOM05D000047 ORTHO05D001383 9.7e-10 67.0 54 57.4
Potri.018G077983 Populus trichocarpa HOM05D000047 ORTHO05D001383 9.7e-10 67.0 48 62.5
Sopen02g013890 Solanum pennellii HOM05D000047 ORTHO05D001383 9.7e-10 67.0 56 55.4
ClCG04G003080 Citrullus lanatus HOM05D000047 ORTHO05D001383 1.3e-09 66.6 51 56.9
QL04p030580 Quercus lobata HOM05D000047 ORTHO05D000044 1.7e-09 66.2 54 59.3
QL05p044848 Quercus lobata HOM05D000047 ORTHO05D000044 1.7e-09 66.2 54 59.3
QL06p007831 Quercus lobata HOM05D000047 ORTHO05D000044 1.7e-09 66.2 54 59.3
QL93p0305_0012 Quercus lobata HOM05D000047 ORTHO05D000044 1.7e-09 66.2 54 59.3
Hund20685 Selenicereus undatus HOM05D000047 ORTHO05D001383 2.2e-09 65.9 54 59.3
Sopen02g002090 Solanum pennellii HOM05D000047 ORTHO05D001383 2.2e-09 65.9 50 56.0
Sopen08g007090 Solanum pennellii HOM05D000047 ORTHO05D001383 2.2e-09 65.9 53 54.7
Sopen08g008240 Solanum pennellii HOM05D000047 ORTHO05D001383 2.2e-09 65.9 53 54.7
Hund02117 Selenicereus undatus HOM05D000047 ORTHO05D001383 3.7e-09 65.1 67 49.3
QL12p042854 Quercus lobata HOM05D000047 ORTHO05D000044 4.8e-09 64.7 54 57.4
Sopen08g005540 Solanum pennellii HOM05D000047 ORTHO05D001383 6.3e-09 64.3 53 56.6
MELO3C033014.2 Cucumis melo HOM05D000047 ORTHO05D001383 8.2e-09 63.9 54 57.4
Hund14863 Selenicereus undatus HOM05D000047 ORTHO05D001383 8.2e-09 63.9 75 48.0
QL01p017897 Quercus lobata HOM05D000047 ORTHO05D000044 1.1e-08 63.5 54 57.4
Hund11047 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.8e-08 62.8 64 53.1
Hund15656 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.8e-08 62.8 51 56.9
Sopen02g013290 Solanum pennellii HOM05D000047 ORTHO05D001383 1.8e-08 62.8 54 51.9
QL06p019599 Quercus lobata HOM05D000047 ORTHO05D000044 2.4e-08 62.4 54 57.4
QL93p0181_0006 Quercus lobata HOM05D000047 ORTHO05D000044 2.4e-08 62.4 54 57.4
Hund07466 Selenicereus undatus HOM05D000047 ORTHO05D001383 2.4e-08 62.4 48 60.4
FvH4_4g25732 Fragaria vesca HOM05D000047 ORTHO05D001383 3.1e-08 62.0 67 46.3
Sopen02g008820 Solanum pennellii HOM05D000047 ORTHO05D001383 3.1e-08 62.0 55 52.7
Sopen12g017880 Solanum pennellii HOM05D000047 ORTHO05D001383 3.1e-08 62.0 54 53.7
PGSC0003DMG400046850 Solanum tuberosum HOM05D000047 ORTHO05D001383 4.1e-08 61.6 66 39.4
QL04p080646 Quercus lobata HOM05D000047 ORTHO05D001383 5.3e-08 61.2 75 45.3
ClCG02G008530 Citrullus lanatus HOM05D000047 ORTHO05D001383 6.9e-08 60.8 64 50.0
PGSC0003DMG400034544 Solanum tuberosum HOM05D000047 ORTHO05D001383 6.9e-08 60.8 50 56.0
MELO3C021895.2 Cucumis melo HOM05D001244 ORTHO05D001076 1.2e-07 60.1 54 55.6
Sed0016940 Sechium edule HOM05D000047 ORTHO05D001383 1.2e-07 60.1 40 67.5
Sopen02g002310 Solanum pennellii HOM05D000047 ORTHO05D001383 1.2e-07 60.1 51 51.0
Sopen08g014520 Solanum pennellii HOM05D000047 ORTHO05D010949 1.5e-07 59.7 67 44.8
Sc18g0005220 Simmondsia chinensis HOM05D000047 ORTHO05D001383 2.0e-07 59.3 48 56.2
ClCG03G010450 Citrullus lanatus HOM05D000047 ORTHO05D001383 3.4e-07 58.5 51 51.0
Sopen10g020080 Solanum pennellii HOM05D000002 ORTHO05D010949 3.4e-07 58.5 51 49.0
Sopen07g021860 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-07 57.4 40 62.5
Hund12334 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.0e-06 57.0 40 65.0
Sopen09g024340 Solanum pennellii HOM05D000047 ORTHO05D001383 1.7e-06 56.2 43 58.1
Sopen10g005940 Solanum pennellii HOM05D000047 ORTHO05D011806 1.7e-06 56.2 50 54.0
PGSC0003DMG400041787 Solanum tuberosum HOM05D000047 ORTHO05D001383 1.7e-06 56.2 51 54.9
ClCG02G011500 Citrullus lanatus HOM05D000047 ORTHO05D000044 2.2e-06 55.8 54 53.7
Hund08511 Selenicereus undatus HOM05D000047 ORTHO05D001383 2.2e-06 55.8 48 54.2
Sopen09g026470 Solanum pennellii HOM05D000047 ORTHO05D010949 3.8e-06 55.1 63 42.9
Gohir.D04G055325 Gossypium hirsutum HOM05D000047 ORTHO05D001383 5.0e-06 54.7 88 34.1
Sopen03g012850 Solanum pennellii HOM05D000047 ORTHO05D001383 5.0e-06 54.7 51 51.0
PGSC0003DMG400046994 Solanum tuberosum HOM05D000047 ORTHO05D001383 6.5e-06 54.3 51 45.1


User provided reference genes

Program Settings